Sorex fumeus (smoky shrew): 130025704
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Entry
130025704 CDS
T10594
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130025704 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130025704 (DEPDC5)
Membrane trafficking [BR:
sfum04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
130025704 (DEPDC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
130025704
NCBI-ProteinID:
XP_055972446
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVMNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEINRA
SIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSCLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERESHSRKSSSFCDVSSSPSLPSRVLPTEEVRSQASDDSSLGRSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMVEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDLTHSSAELLE
LAYHEAAGRHSTSRQPGDGMSFLNFSGTEELSVGLLSNNGAGMNPRTQNKDSLEDSVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKAPKPSPAVPPPLSSSPLYSRGL
VSRNRPEEEDQYWLSMGRTFHRVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVMATKRIT
EGEAHCDIYGDKPRADEEEWHLLDGFIRFVEGLNRIRRRHRSDRMMRKGTTMKGLQMPGP
IATHPLESAGPPVGKKGTSALSALLEMEASQKCLGEQQAAVHGGKSSTQPAESSSVAMTP
TYVDSPRKDGAFFMEFVRSPRTASSTFHSQVSVDQTAAPLLDGSGLGISTGQSTDRVNSQ
NAGNTQNSGEQGFPSANPSDSSSQQLAVSSLTSSSTLAEILEAMKHPSTGVQLLSEQKGL
SPCCFISAEVVHWLVNNVDGVQTQAMAIDIMQKMLEEQLITHASGEVWRTFIYGFYFYKI
VMDKEPDRVALQQPAWHTTAVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNA
AFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIP
LNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQY
IHVTGTVFLQLPYSKRKFSGQPRRRRNSTSSTSQNMFCEERVGYNWAYNTMLTKTWRSSA
TGDEKFADRLLKDFTDFCVNRDNRLVTFWTSCLEKMHASAP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaacttgtcatccacaagaagggcttcgggggcagtgat
gatgagctggtcatgaaccccaaagtgtttcctcacatcaagctaggggacattgtggag
attgctcaccccaacgatgaatacagtcctctgctcttgcaagtcaagtctcttaaggag
gacttacagaaagaaaccatcagtgtggaccagacagtgactcaagtgtttcgtctaaga
ccttatcaagatgtctatgttaatgttgtagatcctaaggatgtgacacttgacctggtg
gaattaacctttaaggatcagtatataggtcgtggggatatgtggcggctaaagaaaagt
ttggtcagcacatgcgcctatatcactcagaaggtggaatttgctggcatcagggctcag
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttatatcagtgaagacacc
agggtggtgtttcgctctacgtcagctatggtttacatatttattcagatgagctgtgaa
atgtgggacttcgatatttatggggatttgtactttgagaaagctgtgaatggtttcctt
gctgacctttttactaagtggaaggaaaagaactgtagtcatgaagtgacagtggtcctg
ttttctagaactttctatgatgcaaaatctcttgatgaatttcctgaaataaaccgagcc
tcaattcgacaggatcacaagggtcgattctatgaagacttttataaagtggtggtgcag
aacgagaggagagaagagtggacatcactgcttgtgaccattaaaaaactcttcatccag
tatccagtgttggtgcgactggaacaggcagagggctttcctcaaggagataattctacc
tcagcacaaggaaactacctagaggcgatcaatctgtcattcaatgtgtttgacaagcac
tacatcaatcgcaactttgaccggacggggcagatgtctgtggtgatcacccccggggtg
ggtgtatttgaagtggaccgcctgctcatgatcttgaccaagcagcggatgatagacaat
ggaattggtgtggacttggtgtgcatgggggagcagccactacatgcagtcccattgttc
aagctacataatcgaagtgcacctcgtgattcctgtctgggtgatgactataatattcct
cactggataaaccacagtttctacacatccaaaagccagctcttttgtaatagtttcacc
ccacgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaaaatggccgggat
acatctcttggaactccaaaagaatcggagaatgcccttcccatccaagtggactatgat
gcctatgatgcacaagtgttcaggctgcctggcccgtctcgggctcagcgcctcgccacc
tgcaggtctgttcgagagcgagagagccacagtcggaagagcagcagcttctgtgacgtc
tcctccagcccttccctgcccagccgtgtgctgcccaccgaggaagtgaggagccaggct
tctgacgacagttccctgggcaggagcgccaacatcctgatgatcccacacccgcacctg
caccagtatgaagtcagcagctccttgggctacaccagcacccgagacgtcctggagaac
atggtggaaccaccacagcgagactctagtgcgccaggaaggttccacgtaggcagcgca
gaatccatgctgcatgttcgacctgggggatacactccgcaacgggccctgattaacccc
tttgccccctcacgcatgccgatgaagctcacgtccaaccgaaggcgctggatgcacacg
tttcctgtgggaccatcgggagaggccatccagatccatcaccagacccgacagaatatg
gcagagctgcagggcagcgggcagcgggacctaactcattcctctgcagagctgctggag
ttagcgtatcatgaagctgctggaaggcacagcacttcccgccagcctggtgacggcatg
tccttcttgaacttcagtggcacggaagagctctccgtcggcctgcttagcaacaatggt
gcaggtatgaatcctaggacccagaataaggattcgctagaggacagtgtttctacctct
ccagatccaattctgacactgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggagtggactggaagtctctcactactccggcttgcctccccctcaccaccgactacttc
cctgaccgccagggcctgcagaacgactacacagagggctgctatgatcttctcccggaa
gctgacatggacaggagggatgaggagggtgtacagatgacagcccagcaggtgtttgag
gagttcatctgccagcgtctcatgcagggctaccaaatcatagtgcagcccaaagccccc
aagcccagccctgccgtcccgcctcccctcagcagcagcccgctctatagccgaggcctc
gtgtcccggaaccgccccgaagaagaggaccaatactggctgagtatgggcagaactttc
cacagagtgacactgaaggataagatgatcacagtcacacgctatcttcctaagtaccct
tatgaatctgcccagatccactacacctacagcctctgcccctcccactctgactcagag
tttgtctcttgttgggtggaattctctcacgaacgactggaggagtacaagtggaattac
ttagatcagtatatttgttctgctggctccgaggacttcagcttaattgagtctctgaag
ttctggaggacccgcttcctgctgctgccagcctgtgtcatggccaccaagcgcatcacg
gagggtgaggcacactgtgacatctatggggacaagccccgggccgatgaagaggagtgg
catctcctggatggcttcattcgctttgtggaaggcctgaaccgaatccgcaggcgccat
cgttccgatcgcatgatgcggaaggggacaaccatgaaaggtttgcagatgcctgggccc
attgccacccaccccctcgagtcagctggccctcctgttgggaagaaggggacctcagcg
ctctctgccctgttggagatggaggccagtcagaagtgcctgggagaacagcaggcagct
gtgcacggcggcaagagctctacccagccagccgagagcagtagcgttgctatgactccc
acctacgtggatagcccacgaaaggacggggccttctttatggagtttgtccgcagccct
cgaacagcatcgtctaccttccactcacaggtgtctgtggaccagacggctgcgccactg
ttggacggctccggtttggggataagcacaggccagtccactgacagagtcaacagccag
aacgctgggaacactcagaactcaggggaacagggcttcccctctgcaaatcccagcgat
agcagctcccagcagctggcggtgagctccctgacgtcctcctctaccctggccgagatc
ctggaagccatgaaacacccctcgacaggggtccagctgctctctgaacagaagggcctc
tcgccgtgctgcttcatcagtgcagaggtggtgcactggctggtgaacaacgtggatggg
gtccagacacaggccatggccatcgacatcatgcagaaaatgctggaagagcagctcatc
acgcacgcgtctggtgaagtctggcggacctttatctatggcttctatttctacaagata
gtaatggacaaagagcccgacagagtggccttgcagcagcccgcctggcacacgacagca
gtggacgacttcgccagcttccagcgcaagtggtttgaggtggcctttgtggccgaagag
ctcttgcactcggagattccggctttcctgctgccctggctgcccagccgacctgcctcc
tacgcaagcaggcacagctccttcagccgcagcttcggcggccggagccaggctgccgcc
ctcttagctgccactgtccctgagcagaggacagtcaccctggatgtcgatgtgaacaac
cgtacagacaggctggaatggtgtagctgctattaccatggaaacttctcactgaatgca
gcctttgagatcaagctccactggatggcggtgaccgccgcagtcctctttgagatggtt
caaggttggcatcgcaaagccacctcctgtggctttttgctagtcccggttttggagggc
ccctttgcgctgcccagttacctatacggcgacccgctgcgagcccagctcttcatcccg
ctcaacatcagctgcctgctcaaggaaggcagcgaacacctgtttgacagttttgaacca
gaaacatactgggatcgaatgcaccttttccaggaagccatagcacacaggtttgggttt
gtgcaagataaatattccgcctcagcttttaacttccctgccgagaacaagccgcagtat
atccacgttacaggaacagtcttcctgcaactgccctactccaagcgcaagttctcgggc
cagccacggcggcgacggaattccaccagctccaccagccagaacatgttctgtgaggag
cgggtgggctacaactgggcctacaacaccatgctgaccaagacgtggcgctccagtgcc
acaggggacgaaaagtttgccgaccggctgctgaaggacttcacggacttctgcgtcaat
cgtgacaaccgcctggtgacattctggacgagctgcctggagaagatgcatgccagtgcc
ccatga
DBGET
integrated database retrieval system
