Sorex fumeus (smoky shrew): 130025708
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Entry
130025708 CDS
T10594
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfum03009
]
130025708 (UTP20)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130025708 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
130025708
NCBI-ProteinID:
XP_055972462
LinkDB
All DBs
Position
Unknown
AA seq
2775 aa
AA seq
DB search
MKTKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSFAYQPLLDLVVQLARDLQT
DFYPHFPDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMTNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVLDRDALFNLMFLDLEEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGKAVKLLFQKLGPVTETETALPWILIGETLKVMVKSAALYVSKEHFGVAFECLQESL
LSLHAKVTQRNSEDGSEQMRRLLETYLILVKHGNGAKITNPEGVCMVLSQTLQIAHLSTS
CCKTLLDVISALLLGEHVSLPEALIKETVEKIFESRLERRLLLDFSEVMFPMKQFEQLFL
PSLLLYLETCFLADDASATDEALALLTKLVLSKAAPPSASSMASEKYPLAFPKQEAGACT
RQRRTRSRGGKEARTVLDHLLGMIERPPARDACLSRSWAALVVLPHVRPLEKEKVVPPVA
CFVEALLLSIDTGNLGKGNLFVLCQAISTLLSLEESSEVLHLVPVERVKNLVLALPSEPS
VLLLADLYYQRLSLCGCRGPLSEEALMELFPKLQANISTGISKIRLLTIRILNHFEVQLP
ELMEDDGPSERRSAFAILRQAELVPATVSDYREKLLHLRKLRHDVARTSVPDGPLQEVPL
RYLLGMLYINFSALWDPVIELISSHAHEMENKQFWKVYYEHLEKAATHAEEELQSDRREK
AAGDGPGEPAEEGDVGALYLEQLAQKTDCRERLDHTNYRFLLWRALAKFPERVEPRSREL
SPLFLRFINNEYYPADLQVAPTQDLRRKGKMGATEELEEDQAADEEELEEEAAPEDEPSQ
KRKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQTVQRITLDCIMTY
KHPHLLPYRENLQRLLEDRTFKEEIVHFSISEDNTVVKTAHRADLFPILMRILYGRMKNK
TGSKTQGKSASGTRMSIVLRFLAGTQPEEIQIFLDLLFEPVKHFKNGECHSAVVQAVEDV
DLSKVLPVGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSQILDQREKIQLR
FLNPLKNLRRLGIKMVTDIFSDWESYQFRTEEIDAVFHGAVWPQIGRLGSESQYSPTPLL
KLISVWSRNPRYFPFLAKQKPGHPECDILTNVFAILSAKNLSEATANIVMEITDDLLSLP
DFEPTDTVLSLPVTGCVYTDDADDSLTVGGRLILPHVPAILQYLSNTTISAEKVKKKKNR
AQVSKELGILSKISKFMKDKEQSSVLITLLLPFLHRGNVPQDTEMDILVTIQNLLKHCLE
PTNFLKPLAKLFSVIKNKLSRQLLCTVFQMLSDFESDLKYVTEVVKLNAFDQRHLDDINF
DVRFSAFQDITSYIKEMQTVDVNYLIPVMHNCFYNLELGDMSLSDNASMCLMSIIRKLAA
LNATEKEYREIIHRSLLERLRKGLKSQTESVQHDYTTLLSCLIQTFPNQPEFKELVQLTD
CHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKTVLSSKALQNYIMPYAMTPIFDEKL
LKHENITIAATEAIGAICKHLSWSAYIYYLKHFIHVLQTGQINQKLGVSLLVIVLDAFHF
DHKSLEEQMRKIQNGENTIEAIELEEQEVMELEQMTEEEMENGCKDLSDNNKDLENPEPA
DGEGTAAEEAEAVPTSVATLPRNKEELERTIKNIQSTITGDILPRLHKCLASTTKREEEH
KLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVLEANLPSILLKVCALLKNRAQEIRDIA
RSTLAKIIEDLGVHYLQYILKELQSTLVRGYQVHVLTFTVHMLLQGLTSKLQVGDLDSCL
NIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSKSYDSYEILGRFLGKEQVTKLIIPLK
EILQNTTSLKLARKVHETLRRIISGLIVNQEMTTESILLLSYGLVSENLPLLTEKEKAPA
VPAPDPRLPPQSCLLLPPTPARGGQKAVVSRKTNMHIFIESGLRLLHLSLKTSKIKSSSE
NVLEMLDPFVALLIDCLDSMDVKVITGALQCLIWVLRFPLPSIESKAEQLTKHLFLLLKD
YAKLGAAKGQNFHLAVSCFKCVTILVKRVKSYRITEKQLQVLLAYAEEDIYDTSRQATAF
GLLKAILSRKLLVPEIHDVMRKVSKLAISAQNEPVRVQCRQVFLKYILDYPLGDKLRPNL
EFVLAQLNYEHETGRDSALEMLAFLFDTFPQGLLHENCGMFFIPLCLMMVNDDSAVCKKM
ASMTVKSLLGKISLEKRDWLFEMVTRWFGAKKSLNRQLAALVCGLFVESEGVAFERRLGT
VLPVIEKEIDPDNFNDIMEETEEKAADRLLFSFLTLISKLVKDCNIIQFTKPSETLSKIW
SHVHAHLRHPHSWVWLTAAQIFGLFFAACQPDELVQKWKAKKKKKKCSEPVAFTFLTEDL
DQKMKSITLASCHQLHSKFLDESLGEQVVKNLLFVAKVLYLLEHGAGGDQGEPKEDAGDL
EASGDDAAREAGEGCAEEKAAAQQRPATLQWLIQKLSHMAKLEAAYSPRILLKRSCIFKF
LGAVAMDLGAERVKPYLPGIVAPLFRELNSTYAEQDPLLKNLSQEIIELLKKLVGLETFS
LAFSSVQKQASEKRALRKKRKAVEFVTNPDIAAKKKLKKHKNKGEAKKRKIEFLRPGYKA
KRQKSHSLRDLAIVE
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcccgtttcccacaagacggaaaacacgtaccggtttcttacatttgct
gaacgactgggaaatgtgaatatcgacatcattcaccgaattgacagaactgcaagctac
gatgaggaggttgaaacctactttttcgagggtctgctgaaatggagagaattgaacctt
acggagcactttggaaaattttacaaagaagttattgacaaatgccagtcatttaatcag
ttggtgtatcatcaaaatgagatcgttcaaagtttgaaaactcacctacaaatcaagaac
agctttgcttatcaaccccttttggacttggttgtccaattggcacgcgatctacagaca
gacttctacccccactttccggatttcttcctgaccatcacctccatcctggagacgcag
gacacggagttgttagaatgggcgttcacttcgctctcctacctgtacaagtacctgtgg
agactgatggtgaaggacatgaccaacatatacagcatgtatagcacactcctggctcat
aaaaagctacatataagaaattttgccgctgaaagctttacttttctgatgagaaaggtt
ctggatagagatgcgcttttcaatctgatgtttcttgatcttgaggaacatcccgaaaag
gtggagggggttggacagttgctgtttgagatgtgcaaaggagtcagaaacatgtttcac
tcctgcacagggaaggcggtgaagctacttttccagaaactgggaccggtcactgaaaca
gaaactgccctgccttggattttaattggagaaacactcaaagtcatggtcaagtccgct
gcattgtacgtctccaaagaacactttggtgtagcttttgaatgtttgcaggaatcactc
ctgagcctgcacgccaaagtaacccaaaggaactctgaggatggttctgagcagatgaga
aggctgttggaaacctacctgatcctcgtcaagcacgggaacggagcgaagataactaac
ccagagggtgtgtgcatggtgttgtctcaaacgttacaaattgcccatctctccacgtct
tgctgcaaaaccctcttggatgtgatttccgctttgctcctaggcgagcatgtgtccttg
ccagaggccctcatcaaagaaaccgtagaaaagatttttgagagccgacttgaaagacgt
ttgcttttggatttttccgaagtcatgtttcctatgaagcagttcgagcagcttttcctg
cccagcctcctcctgtaccttgagacttgcttcttggcggatgacgcgagtgccaccgac
gaagctctggcgcttttgaccaagctggtactgagcaaggccgcgcctccctctgccagc
tccatggcctccgagaagtatcctctggctttcccgaagcaggaggcgggagcatgtaca
cgacagaggaggacgaggtccaggggaggaaaggaggccaggacggtgctggaccacctc
ttgggcatgatcgagcggccgcccgcccgggatgcttgcctctcgcgctcttgggcagcc
ctcgtcgtgttgcctcatgttcgacccctggagaaggagaaggtggtgccaccggtcgcc
tgcttcgtggaagccctgctcctgagtattgacacagggaatttgggaaaaggaaactta
tttgttctgtgtcaggctatcagtactcttctcagtttggaagaatcttctgaagtactt
catttggttcctgtggaacgtgtgaagaatctagtcttggcccttccttcagagccgtcg
gtgttgctcttggccgatctgtattatcagagattatcgttatgtggctgccgagggccc
ctttctgaggaagcgttaatggaattgttccccaagttacaagcaaacatttcgacgggg
atatccaagattcggctgttgacaataaggatcctaaatcacttcgaagtgcaacttcca
gaattgatggaggacgacgggccctcggagcggcggtcggccttcgccatcctgcgccag
gcggagctggtcccggccactgtgagcgattacagggagaagctgctgcatctgaggaag
ctccggcacgatgtggcgcggacgtccgtgcccgacgggcccttgcaggaggtgccgctc
cgatacttattaggcatgttatatattaactttagtgctctctgggacccagtgattgaa
ctcataagttctcatgcacacgaaatggaaaataagcagttctggaaagtctactatgag
catctagaaaaagcagctacacacgctgaggaagagctgcagagtgacaggagggagaag
gccgctggagacgggcctggggagccggccgaggagggcgatgtgggcgcactctatctg
gagcagttagcgcagaaaacggactgccgggaacgacttgaccataccaactaccgcttc
ctgctctggcgggctctggccaagttccccgagagggtcgagccacggtcccgggagctt
tccccacttttcttgagatttatcaacaatgagtattacccagcagacctgcaggttgct
cccacccaggatctgcggagaaaaggcaaaatgggggccacagaggagctcgaagaggac
caggcggctgacgaggaggagctggaggaagaggcagcgcccgaagatgagccgtcacag
aagaggaagaccaggagggctgcggcaaagcaattaattgctcatttgcaagttttttct
aagttttcgaatccacgggccttatatctagaatctaaattgtatgaactctatcttcaa
ttgttgctccatcaggatcagacagttcaaagaataaccctggattgcatcatgacgtat
aagcatccgcatcttctcccttacagggaaaacttgcaaagattgcttgaagacagaacc
tttaaggaagagatagtgcattttagcatttccgaagataataccgtagtgaaaacagcc
caccgagcggatctctttcctattctgatgagaattttgtatggacgaatgaagaataag
actgggagtaagactcaggggaaatctgcttcaggcacccgcatgtccattgttctgagg
ttcctcgctgggactcagcccgaggagatccagatcttcttggacctgctgtttgaacct
gtgaagcacttcaagaacggcgaatgccattctgcagtagttcaagcagtagaagatgtg
gatttgtctaaagttcttcctgttggtcgtcagcatggtattttgaatagccttgaaata
gtcctgaagaacataagtcatctgatcagtgcctacttaccaaagattttgcagatactc
ctctgcatgacagctactgtgtcacagatccttgatcaacgggaaaagatccagctaagg
tttctaaaccccctgaagaacttaaggcgcctgggaattaaaatggtcactgacatcttt
tcggactgggagtcatatcaattcaggacggaagaaattgacgccgtctttcatggtgcc
gtgtggccccagatcggcaggcttggatctgagagccagtattctcctacgcctctcctg
aaactaattagtgtctggagcagaaacccaaggtacttccctttcctggcaaaacagaaa
cctgggcacccagaatgtgacatcttgaccaatgtttttgcgattctctcagcgaagaat
ctctctgaagccacagctaacattgtgatggaaataacggatgatcttctgagccttcca
gattttgagcccacagacaccgttttgagcttgccagtcactggatgtgtatacactgat
gatgcagatgattctctcacagttggaggacgattaattctacctcatgtcccggcaatt
ctccagtatctcagcaacaccacaataagtgcagaaaaggtgaaaaagaaaaagaatagg
gcccaagtcagtaaggaactcggcattctttccaagatcagcaagttcatgaaggacaaa
gagcaaagttcggttcttattacacttctacttcctttcctccaccgtggcaatgttcct
caggatacagagatggatattctagtgacaatacaaaatctactgaagcattgtctggag
cctacaaacttcctcaaaccgctagcaaaactcttctctgtcattaagaacaagttgtca
agacagttgctttgtacagttttccagatgctttctgattttgagagtgacttaaagtac
gtgactgaagttgtcaagcttaatgcatttgatcaaagacatcttgacgacatcaacttt
gacgttcgcttctcggcattccaggacatcacctcctacattaaagaaatgcaaactgtg
gatgtcaactatctaatcccagttatgcataactgtttctataacctggagctaggggac
atgtctttaagtgataacgccagcatgtgtttgatgagcatcatccggaaactggctgcc
ttgaacgccacagagaaggagtacagagaaatcattcaccgttcactcctggagagactg
aggaaaggactcaagagtcagacggagagtgttcaacatgattacaccacactgttgtct
tgtttaattcaaaccttcccaaatcaaccagaatttaaagagttggtacagctgactgac
tgccatgatccggaaatggacttctttgaaaatatgaaacacattcagatccacagaaga
gcaagagccttgaagaaactggcaaaacaactcatggaaggcaaaaccgtgctgtcttct
aaagctctgcagaattacatcatgccctatgccatgactccgatttttgatgagaaattg
ctcaagcatgaaaatataaccattgctgccactgaagctattggagcgatttgcaagcat
ctctcctggtcagcatatatctattacttgaaacacttcattcatgtcttgcaaacggga
cagatcaatcaaaagttaggtgtgagtttgctagtaatagtgttagatgcattccacttt
gaccacaaaagccttgaagaacaaatgagaaaaattcagaatggtgaaaacacaatagaa
gcgattgagttagaagagcaagaagtcatggagttagaacaaatgactgaggaagagatg
gaaaatggatgtaaggacttgtcagataacaataaagacctggagaaccctgagcctgct
gatggggaagggacagcagctgaggaagctgaggctgtcccaacgtccgtcgcaaccctt
ccgcggaataaggaagagctggagagaacaattaagaacatccaaagcaccattacgggg
gatattctgcccagacttcacaagtgcctggcatctacgactaagagggaggaagagcac
aagctcataaaatcgaaggttgtgaatgacgaagaagtggttcgagttcccctggctttt
gccatggttaagctgatgcagtccctcccacgcgaagtcttggaagcgaatctgccaagt
attttgctgaaagtgtgtgcactcctcaagaacagagcccaggagatcagagacattgca
cgcagcactctggcaaagataatagaggatctgggtgtgcattacctacagtacattttg
aaggaattacagagcacccttgtccggggatatcaggtccacgtgctgactttcaccgtc
cacatgttactacaaggtctcaccagcaagctgcaggtcggggatctggactcctgctta
aatataatgattgagattttcaatcacgagttgttcggtgccgtcgctgaggagaaggag
gtcaagcagatcctttcgaaagtcatggaggcccgacgcagcaagagttatgactcctac
gaaatcctgggcaggttcctagggaaagagcaggtgacgaaactcatcatcccgctgaaa
gagatcttgcaaaacaccacgagtttaaaactagcccggaaagttcacgaaactttacgt
cgaatcatttcggggctaattgtaaaccaggaaatgacaacagaatccatcctgctgctc
agttatggcttggtcagcgaaaaccttccactgttaacagagaaagaaaaagccccagca
gtccccgcgccggatccacggctgccccctcaaagctgcctcctcctccccccgactcct
gctcgcggaggccagaaggccgtggtcagccggaagaccaacatgcacatattcattgag
tctggcctgcggctgctgcacctgagtctgaagacttccaagatcaaatcttcaagtgag
aatgttctagaaatgttggaccctttcgtggctctcctcatagactgcctcgattctatg
gatgtgaaggtgatcacaggggctctgcagtgcctcatctgggtcttgaggttcccgcta
ccttccatcgaaagcaaagcagaacagttgacgaagcaccttttccttctgctgaaggac
tacgccaagctcggggcagccaagggccagaatttccacctagcggtcagctgcttcaag
tgtgtgaccattctggtgaagagagtgaagtcttaccggatcaccgagaagcagcttcag
gttctgctggcgtacgcagaggaggacatctatgacacttccagacaggccactgcattc
gggctgctaaaggccattttgtccagaaagttgctggtcccagaaatacatgatgtcatg
cgcaaagtctccaagttggcaatttccgcacagaacgagcctgtccgggtgcagtgcagg
caggtgttcctgaagtacattcttgactatcccctaggggacaagttaagaccaaacttg
gagttcgtgctcgctcaactgaattatgagcacgagacggggagagactctgccttggag
atgttggcctttctctttgacacgttccctcaggggctgctccacgagaactgcgggatg
ttcttcatccctctctgtctgatgatggtcaacgatgactctgctgtgtgcaagaagatg
gcatccatgaccgtcaagtccctgctcggcaaaatcagcctggagaagagagactggctc
ttcgagatggtcaccaggtggttcggagcaaagaagagtttgaacagacagctggccgcc
ctggtctgcggcctgtttgtagaaagtgaaggagttgcctttgagagaagacttggaacg
gtgctccctgtgattgagaaggaaattgatcctgacaactttaacgacatcatggaagaa
acagaagaaaaagccgcagaccgtcttctgttcagttttcttacactaataagcaaactc
gtcaaagactgtaatatcatccagttcaccaagccctctgagactctgagtaaaatctgg
agccacgtgcacgcacacctgcgccacccgcacagctgggtgtggctcacggcggcccag
atcttcgggctgttcttcgccgcatgccagcccgacgagctggttcaaaaatggaaggcc
aaaaagaagaaaaagaagtgctcggagcccgttgcgttcaccttcctcacagaggacctc
gatcagaagatgaaaagtatcaccctagcctcatgccatcagttgcattccaagttcctg
gatgaatctcttggagagcaggttgtcaagaatctgttgttcgtggccaaagtcttatat
ttgctggagcatggcgcgggtggggatcaaggtgaacccaaagaagacgcaggagatcta
gaagcctcaggagacgatgcggcccgcgaggccggggagggctgtgccgaggagaaggcg
gcagcccagcagaggccagccacgctgcagtggctcatccagaagctgtcccacatggcc
aagctggaagctgcgtattccccaaggatcctcctaaagaggtcgtgcatcttcaagttt
ctcggcgccgtggctatggatctcggagcggagcgggtgaagccgtatctcccaggcatc
gtagcacccctgttccgggaactgaatagcacgtacgcggagcaagatcctttgctgaag
aatctatcccaggaaatcattgagttactcaaaaagctggttggactcgagactttctca
ttagccttttcctccgtacagaagcaggctagtgagaagagggcactgcggaaaaagagg
aaggcggtggagtttgtgactaatcccgatattgctgccaagaaaaaactgaagaaacac
aaaaataaaggtgaagccaagaagagaaagatagaatttctgcgtccaggctacaaagcc
aagagacagaagagccacagcctccgagatctggcgatagtggaatga
DBGET
integrated database retrieval system
