KEGG   Sorex fumeus (smoky shrew): 130025962
Entry
130025962         CDS       T10594                                 
Symbol
WRN
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
  KO
K10900  werner syndrome ATP-dependent helicase [EC:5.6.2.4]
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfum03032]
    130025962 (WRN)
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130025962 (WRN)
Enzymes [BR:sfum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     130025962 (WRN)
DNA replication proteins [BR:sfum03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    130025962 (WRN)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     130025962 (WRN)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DEAD Helicase_C RQC HRDC RecQ_Zn_bind HTH_40 ResIII SAM_GIDA_C
Other DBs
NCBI-GeneID: 130025962
NCBI-ProteinID: XP_055972606
LinkDB
Position
Unknown
AA seq 1434 aa
MSISMMSKKKETQRKLPEWMSVQNKKCDVEEKKSSIQKSVFEDDLPFLEFTGSIMYSYEA
SDCSFLAEDISKSLSDGYVVGFDIEWPPIYHKGQLGKVALIQLCVSESKCYLFHIPSASV
FPQGLKLLLENEAIKKAGVGIEGDQWKLLRDFDVKLKSLVELADVANEKLKCTETWSLNG
LVKHLLGKQLLKDKAVRCSNWNDFPLSETQKLYAATDAYASLVIYRKLEILENDVQIFAI
NKEEKLSPHSVKKQLTSISEEMMKLAEHLPDTLSKCEDSQRMCLLLKDISKSLYSLKKML
LGSSDTKTELHPSSDFSLLPVQNPVAGEAHQKQIRKHKIVSKVKNEKSLDNIENIFEDEV
KQGENKFEDRLEDQSKTNTERTCLMSLDITDYELQILEQQASRKVLSGITCKSPEHLSSE
NNEEDMSYVIESDEDLEIEMLKSLENLNSDTVDPVHSECIEMESNLDLHFEEEDDEDEAI
KEAEEDIDPSLPEPSAEQVTCLKTYFGHSNFKPVQWKVIHSILKERRDNVVVMATGYGKS
LCFQYPPVYEGGIGLVISPLISLMEDQVLQLEMSNIPACFLGSAQSKNVIADLKLGKYRI
VYITPEFCASYLDLLQQLEVNIGFTLIAVDEAHCISEWGHDFRNSYRSLHSLRRVLPLVP
IVALTATATSSIREDIIRCLKLKDPQITLTSFDRPNLYLEVGRKTGNICQDLKQFLVRKT
SSTWNFEGPTIIYCLSRKMTEQVAAQLRLLQVACETYHAGMSIKSRKEVHHKFMRDEIQC
IVATIAFGMGINKADIRRVIHYGAPKEMESYYQEIGRAGRDGLPSSCHLLWAPADIALNW
NRLNEIKNEQFRLYKLKMMAKMRKYLYSSKCRRQIILSHFEDKQLRKASLGIMGTEKCCD
NCRSRLNPCLAIDDTEETLQDFGPQAFQLLSAVNILGEKFGIGVPILFLRGSYSQRLEER
YRKHSFFGIGKDQTESWWKALSYQLVIEGFLIEASGHNKFVKIYKLTKKGRNWLDKANAE
SARKLILQTNEELCSSRHLQSSKTVSSGSRSQQYFSRQEPIELSAERKSNLEKVYSYKTV
DKMSPGKNSPKKSIMVESSGKFSRSSEPVVSAQEQETQTVLYCKLVEARQKHANKMNVPP
AILATNKILLDMAKMRPTTVENVKRIDGVSEGKSTMLAPLLEVIKDFCQLNTIQTDLFSS
AEPQEGLNNRLRVKEACLPSPSVSSTDPLFQEEKMVLKREAENRRLPLTAVGRPLSQAVR
AGYPLQTQGAGLTPEVQKIIADVIRNPPVNSDTSQMKLIRTLVPEDIDTYLIHMAIEILE
KDHNNKSFCQPSYDSSIKRCYPDSEEGCSSSKRHKEEGISTKVNEKCFDDVALKEESQRL
TSWDQPFSDSEIEDLFTDCYPQTSSETSKEKLPAEGNYVRKKTVAKTKKKGLFS
NT seq 4305 nt   +upstreamnt  +downstreamnt
atgagcatttccatgatgagtaaaaaaaaggaaacacagcggaaacttcctgagtggatg
tctgtgcagaataagaaatgtgatgtagaagagaaaaagtcatctattcagaagagtgtt
tttgaagatgacctccccttcttagaattcactggatccattatgtatagttatgaagct
agtgattgctctttcttagcagaagatattagcaagagtctatctgatggatatgtggta
ggatttgacatagaatggccgccaatataccacaaagggcaactgggcaaagttgcacta
attcagttgtgtgtgtcagaaagtaaatgttacttgtttcatattccttctgcatcagtt
tttccccagggattaaaactgttgcttgaaaatgaagcaattaaaaaggcaggtgtagga
attgaaggagatcagtggaaactcctacgtgactttgatgttaaattgaagagtctcgtg
gaactagcagatgttgccaatgaaaagttgaaatgtacagagacatggagcctcaatggt
ttggttaaacatctcttaggtaaacagcttctgaaagataaagctgttcgctgtagcaac
tggaatgattttcctctcagtgaaacacagaagctgtatgcggcaacggatgcttatgct
agtctcgtcatttatcgaaaactggaaattttggagaatgatgtgcaaatatttgctata
aataaagaggagaaattatcaccccacagtgtgaagaaacagttgacttccatctctgag
gagatgatgaagctggctgaacaccttccggatactttaagcaaatgtgaagactcacag
aggatgtgtttactgctaaaggatatttcaaaaagtttgtattcattgaaaaagatgcta
ttaggttcttctgacaccaagactgaactgcaccccagcagtgatttcagcttattgcca
gttcagaatccagttgctggtgaagcacatcagaaacaaattaggaaacataaaattgtt
agtaaagttaaaaatgagaaatctcttgataatatagaaaatatatttgaagatgaagta
aaacaaggagaaaataaatttgaagatcgattagaagaccaatcaaaaacaaatacagag
agaacttgtttgatgtcattagatattacagattatgaactccaaattttggaacagcag
gcttccagaaaagttctgagtggtattacttgcaaatctccggagcatttgtcttctgag
aataatgaagaggatatgtcttatgtaattgaaagtgatgaagatttagaaattgagatg
cttaagtctttagaaaacctaaatagtgacacagtggatccagttcattcagaatgtata
gaaatggaaagtaatctggatcttcattttgaagaagaggatgatgaggatgaagcgatt
aaagaggcagaagaagatattgacccttcattaccagaacctagtgcagagcaagttact
tgcctcaagacctactttggccattccaattttaagcctgttcaatggaaagtaattcat
tcgatactgaaagaaagacgagataatgttgttgtcatggcaactggatatggaaagagt
ttgtgcttccagtatcctccggtttatgaaggtgggatcggccttgtgatctctcctctt
atttctttgatggaagaccaagtgctccagctcgaaatgtccaacattccagcttgtttt
cttggatcagcacagtcaaaaaatgttatagcagatcttaaattaggcaaatatcgaatt
gtatacataacaccagaattctgtgctagttacttggacctactccagcaacttgaagta
aatattggattcactcttattgctgtggatgaggcacactgtatttctgagtggggacat
gattttagaaattcatacagatctctgcactctctgaggagagtactcccgttggtgcca
attgttgcactcactgctacagcaacttcttcaatccgggaagacattattcgttgttta
aaactgaaggatcctcagattactcttactagttttgatcggccaaacttgtacttagaa
gttggacgaaaaactggaaatatttgtcaggatctgaagcaatttcttgtcagaaagaca
agttctacgtggaattttgaaggcccaactatcatctattgtctttctagaaaaatgaca
gaacaagttgcagctcaacttaggttgctgcaggtagcctgtgaaacataccatgcggga
atgagtattaagtccaggaaagaggtgcatcacaagttcatgagagatgaaattcagtgc
atcgtagctaccatagcttttggaatgggaattaataaagctgacattcgcagagtcatt
cattatggtgctcctaaggaaatggaatcatattaccaggagattggtagagctggtcga
gatgggcttccaagttcctgccacttgctctgggctccagcagacattgctttaaattgg
aaccgccttaatgagataaaaaatgaacagtttcgattatacaaattaaagatgatggca
aagatgagaaaatacctttattccagcaagtgtaggcgacaaatcatcttgtctcatttt
gaagataaacaactacgaaaagcctccttgggtattatgggaactgaaaaatgctgtgat
aattgcagatccagattaaatccttgccttgcaattgatgatacagaggagactctacag
gactttggtccacaagcattccagttattatctgctgtgaacattttaggagaaaaattt
ggaattggggttccaattttgtttctccgaggatcttattcccaacgtcttgaagaaaga
tatcgcaagcacagtttttttggcattggcaaagatcaaacggagagttggtggaaggct
ttatcttatcagctcgttattgagggattcttgatagaggcttctggacacaacaaattt
gtgaagatttacaaacttacaaaaaagggtagaaattggcttgataaagccaatgccgag
tctgctcggaaacttatccttcaaactaatgaagaattatgttcatcgaggcatctacaa
agttctaaaactgtgtcttcaggcagtcgcagtcaacagtatttctctagacaagaacca
attgaattaagtgcagagaggaagtctaacttggagaaggtttattcttacaaaacagtt
gataagatgtctcctgggaaaaacagtcctaaaaaaagcatcatggtggagtcatcaggg
aaattttccagatcttcagaacccgtggtctcagctcaagagcaggagactcagactgtg
ttatattgcaaattagtagaagccaggcagaaacatgccaataaaatgaatgttccacca
gccattctggcaacaaataagatattgctggatatggccaaaatgagacctactactgtt
gaaaatgtgaaaaggattgatggggtttctgaaggcaaatctaccatgttggcccctctc
ttggaagttatcaaagatttctgtcagttaaatactattcagacagacttattttcaagt
gcagaacctcaggaaggactgaacaacagactgagggtgaaggaagcctgtttgccgtca
ccatccgtgtccagcacagaccctttattccaagaagagaagatggttttgaagcgtgaa
gctgagaacaggagactgccgctcacagcagttggcaggcccttatcccaagcggtgagg
gctggctacccactccagacgcagggagcaggcctgactccagaggttcagaagattatt
gctgatgttatccgaaaccctcccgtcaactcagatacgagtcaaatgaaactaattaga
acgttagttcctgaagacattgacacatatcttatccacatggcaattgaaattctggaa
aaagatcataataataaatcgttctgccaaccttcatacgattccagcataaagaggtgt
taccctgactctgaagagggctgttcaagttctaagagacacaaggaagaaggcattagt
acgaaggtcaatgagaaatgttttgatgatgttgcattgaaagaagaaagtcagagacta
acttcttgggaccagccattcagcgattcagaaatagaggatctgtttacagattgttac
ccacagacttcctctgagacttcgaaggaaaaattacctgccgaaggaaattatgtcaga
aaaaaaacagtagccaaaacaaaaaagaagggtctttttagttag

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