Sorex fumeus (smoky shrew): 130025992
Help
Entry
130025992 CDS
T10594
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130025992 (AFF3)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130025992 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
130025992
NCBI-ProteinID:
XP_055972625
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MDSFDLALLQEWDLESLWGEDILNQRNDSLLVEFQSSASRCRSVYEPDRNVLRRKERERR
NQETQQDDGTFNSSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGIPQTPVNKIDEHFAADSRAPPPPPSVCSTASSTPAAVPVPQSKRGTMGWQKTGHPP
SDGQQRATQQGSLRTLLGDGVGRQQPRAKQVCNVEVGLQTQERPPAMAAKHRGGGHCVQT
FPPSLASKPSLVQQKPTAYVRPMDGQDQAPDASPKLKSPSETSMHCTPYRGLPAAKQESA
RAKARLAKFSIPKQGEESRSGEANSCVEEIIREMTWLPPLSAIQAPSKVEATKFPFPNKD
SQLVSSGHNNPKKGDAEPASPDNGTSNTSMLEDDLKLSSDEEENEQQAAQRTALQALSDS
AVGPPAACQASVPSSQRSSSGSSSSGSSSSSDSESSSGSDSETESSSSESEGSKPPHYSS
PEAEPASSNKWQLDKWLNKVTPHKPPAPVPGDALPEGAPFYAKEPECPPVPDAAAAKGPC
RDEQRPRTASKAPGSKAGRQKSPPAALAVAVAVAPAESAPAPARRPLPKKPPRRAERAGP
GDGPPCAPCARPDEPDEPPRPRPGAGSGRSGHRKEPRPAGAGDKRRTRGLGRSVPKSREF
IETESSSSSSSSSSDSDAESERDECPLAKAPAPDARPREAAPRASVGSISARSAGDAAEL
EEQFYTLVPFGRNELLSPLKDSEEGRALWVKIDLSLLARVPEPGLPAPRAPKDAADGAPP
SHPADPPPDKALPKSKRKRKCDNEDDYREVKKAQGEKEGASRLTTSANNSLSANHCAINI
NSLAIPINKNDKMLRSPISPLSDASKHKYPSEDLTSSCRPNGTGLFPAATTTKKHKAESQ
LQPHSGDLTKAAHSTSENILHKSRLQAEPWSPGPNGHRDCKRQKLVFDDMPRSADYFMQE
AKRMKHKADAMVEKFGKALNYAEAALAFIECGNAMEQGPMESKSPYTMYSETVELIRYAM
RLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQA
PSPWGASGKSTGTPSPMSPNPSPTSSVGSQGSLSNASTLSPSTIVSIPQRIHQMAANHVS
ITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNST
HLS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacctggcgctgctgcaggagtgggacctggagtcgctgtggggtgaa
gacatcttaaaccagaggaatgactctctccttgtggaatttcagtcatcagccagcaga
tgcaggagtgtctatgagccagatagaaatgtgttacgaaggaaagaacgagaaagaaga
aatcaggaaactcaacaggatgatggcaccttcaattcaagttattctctcttcagtgaa
ccctacaagactaacaaaggggatgaactctccaatcggatccagaacacgttaggcaat
tacgatgaaatgaaggactttttaactgatcggtctaatcagagtcatcttgttggtgtt
cctaaacctggcattcctcagactcctgtgaacaaaatcgatgaacattttgctgcagat
tcaagagccccacccccacccccatcagtttgtagcaccgcatcttccacaccagcagct
gtccccgtgccacagagtaaaaggggcaccatgggctggcagaagactgggcacccacct
tctgatggccaacagagagcaacgcaacagggttctctcaggaccttgcttggagatggt
gttggcagacagcagccgcgggccaaacaagtgtgcaatgtagaggtgggtctgcagacc
caggaaaggccacctgccatggcagccaagcacagaggcggaggacactgtgtccaaacc
tttcctccatccctggcttcgaaacccagcctggtccaacagaaaccgactgcgtatgtg
cggcccatggacggccaagaccaggctcctgatgcgtctccaaagcttaagtcaccctcg
gaaaccagcatgcactgcactccgtacaggggccttccagccgccaagcaggagtctgcc
agagccaaggccaggctggccaagttcagcatccccaaacaaggcgaggagagcagatct
ggagaagccaacagctgtgtagaagaaataattcgggagatgacctggcttccacccctt
tcagctattcaagcacccagcaaagtggaagcaaccaaatttcccttcccaaataaggat
tctcagcttgtttcctctggacacaataatccaaagaaaggtgacgctgagcctgccagt
ccagacaatgggacgtcaaatacatcaatgctagaagatgaccttaaactcagcagtgat
gaagaggagaatgagcagcaggcggcccagagaactgcactccaggctctgtccgacagc
gccgtgggcccgccggcagcgtgtcaagcctctgtgccttccagccagcgcagctccagc
ggcagcagctccagcggcagcagctcatccagtgactcggagagcagctctgggtccgac
tcggagacagagagcagctccagcgagagtgagggcagcaagccgccccactactccagc
cccgaggccgaaccggcgtcctccaacaagtggcagctggacaagtggctgaacaaggtg
accccgcacaagccgccggcgcccgtccccggggatgcgctgcccgagggcgcgcccttc
tacgccaaggagccagagtgcccaccggtgcccgacgccgccgccgccaagggcccctgc
agggacgaacagcggccacggacggccagcaaggcgccgggcagcaaggcggggcggcag
aagtcgccgcccgccgccctggccgtggccgtggccgtggcgcccgccgagagcgcgccc
gcccccgcgcgcaggccgctgcccaagaagccccctcggcgcgccgagcgtgcggggccc
ggggacggccccccgtgcgccccctgcgcgcggcccgacgagcccgacgagcccccgcgg
ccacggccaggcgcgggcagcggccgcagcggccaccgcaaggagccgcgccccgccggg
gcgggcgacaagcggcgcacgcggggcctgggccggagcgtgcccaagtccagggagttc
atcgagaccgagtcgtcgtcgtcgtcctcctcctcctcgtccgactcggacgccgagtcg
gagcgggacgagtgcccgctggccaaggcgcccgcgcccgacgcgcggcccagggaggcg
gccccgcgcgcgtccgtgggctccatcagcgccaggtcggcgggcgacgcggccgagctc
gaggagcagttctacacgctcgtgcccttcggccgcaacgagctgctgtccccgctcaag
gacagcgaggagggccgcgccctctgggtcaagatcgacctgagcctgctggccagggtc
cccgagccgggcctcccggcgccccgcgcgcccaaggacgccgccgacggcgcgcccccc
agccaccccgcggacccgccgcccgacaaggcgctgcccaagtccaagaggaaacgcaag
tgtgacaacgaagatgactatagggaggtcaagaaggcccagggagagaaggagggtgct
tcacgactgaccacctctgccaataacagcttgtctgccaaccactgcgccataaacatc
aacagcctggcaataccaataaacaaaaatgacaagatgctgcgctcacccatctcgccc
ctgtctgatgcctccaaacacaaataccccagcgaggacctgacttcctcctgcagaccc
aatggcacagggctcttccctgctgccaccaccaccaagaagcacaaggccgagagccag
ctacagcctcacagtggagacctcacgaaagctgctcacagcacttctgagaacattctt
cacaagtcacggctgcaagcagagccctggtctccaggccccaatggccacagggactgc
aagaggcagaaactcgtcttcgatgacatgccacgcagtgcagattattttatgcaagaa
gctaaacggatgaagcataaagcagatgcaatggtggagaagttcgggaaggctttgaac
tacgcagaagcagccctggcattcatcgagtgtggaaatgccatggagcagggcccgatg
gagtccaaatccccgtacacgatgtactcagaaacagtggagctcatcaggtatgctatg
agactaaaaacccactcaggtcccaatgccactccagaggataaacaactggccgcatta
tgctaccgatgcctcgcgctcctttactggcggatgttccggctcaaaagggaccatgct
gtcaagtattcaaaagcactcatcgactacttcaagaattcatctaaagctgcccaggcg
ccgtctccgtggggggccagtggaaagagcacgggaacgccctcccccatgtctcccaac
ccctccccaaccagctccgtggggtctcaggggagcctgtccaacgccagcaccctatcc
ccgtccaccatcgtcagcatcccacagcgcatccaccagatggcagccaatcatgtcagc
atcaccaacagcatcctccacagctacgactactgggagatggccgacaacctggccaag
gagaacagagaattcttcaatgacctggacctgctcatgggacctgtgaccctgcacagc
agcatggagcacctggtccagtactcccagcagggcctgcactggctgcggaacagcact
cacctgtcgtag
DBGET
integrated database retrieval system
