Sorex fumeus (smoky shrew): 130025993
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Entry
130025993 CDS
T10594
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
sfum05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130025993
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130025993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130025993
03041 Spliceosome [BR:
sfum03041
]
130025993
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130025993
mRNA cycle factors
Common to processing body (P body) and stress granule
130025993
Spliceosome [BR:
sfum03041
]
Common components
Common spliceosomal components
hnRNP proteins
130025993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DUF4715
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
130025993
NCBI-ProteinID:
XP_055972627
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MEVKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPG
AHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEMKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRG
GNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG
GGYGGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSP
YGGGYGSGGGSGGYGSRRF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccgcccggtcgcccccagcccgactccggccgtcgccgccgccgc
cggggggaggagggccatgatccaaaggaaccagagcagttgagaaaactgtttattgga
ggtttgagctttgaaactacagatgatagtttaagagaacattttgagaaatggggcaca
cttacagattgtgtggtgatgagagacccccaaacaaaacgttccagaggctttggtttt
gtgacttactcatgtgttgaagaggtggatgcagctatgtgtgctcgaccacataaggtt
gatgggcgtgtagtggaaccaaagagagctgtttctagagaggattctgtgaagcctggt
gcccatttaacagtgaagaaaatttttgttggtggtattaaagaagacacagaggaatat
aatttgagagactactttgaaaagtatggcaaaattgaaaccatagaagtaatggaagac
aggcagagtgggaaaaagagaggatttgcttttgtgacttttgatgatcatgatacagtt
gataaaattgttgttcagaaataccacactattaatgggcataattgtgaaatgaaaaag
gccctttctaaacaagaaatgcagtctgctggatcgcaaagaggtcgtggaggtggatct
ggcaactttatgggccgtggaggcaattttggaggtggtggaggaaactttggccgtggt
ggaaactttggtgggagagggggttatggtggtggcggtggtggcagcagaggtagttat
ggaggaggtgatggtggatataatggatttggaggtgatggtggcaactacggcggaggt
cctggttatagtagtagaggaggctatggtggtggaggaccaggatatggaaaccaaggt
ggtggatatggtggaggtggtggaggatatgatggttacaatgaaggaggaaattttggc
ggtggtaactatggtggtggtgggaactataatgattttggaaattatagtggacaacag
caatcaaattatggacccatgaaagggggcagttttggtggaagaagctcgggcagtccc
tatggtggtggttacggatctggtggtggaagtggtggctatggtagcagaaggttctaa
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