Sorex fumeus (smoky shrew): 130026183 Help Entry 130026183         CDS       T10594                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     130026183 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:sfum04990]     130026183 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:sfum04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    130026183 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ Calsarcin PDZ_6 PDZ_2 Motif Other DBs NCBI-GeneID:  130026183 NCBI-ProteinID:  XP_055972909 LinkDB All DBs Position Unknown AA seq 1094 aa AA seqDB search MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP CADLTYPEVIKLMESVTDSLQMLVKRSPSGINETLIPEAENQNHKLLTREGCVESTTLQI RPATGSQCKEFSSSPAPHRIPVAEDGESGPDCSGSVKEDPASPGAPHTVEFRRGCLAEET VLSGEVQAGLPESPVEFQLSLPQERHEGSSAPGEAPLEAEKSQSPDPTPPFQHDSAAPLQ PVPAEEPRGLSLRSSKTIQLSSGLDLTAIPDREAGNVGLSRVDVLLNCSARQQTEGYRLQ AGKGCVDSPGEGGQSEAPPSLVSFAVSSEGTEQGDEPHSERDHSRPHKHRARHARLRRSE SLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLISYGTGELDRGAG GEEEEEGDPEAISEVAFLGASESEVDEELLSDTEGSRPVVNFDWDSGLVDIEKKLNRGDR METLPDTAGKGALMFAKRRERMDQITAQQEEERGGGMPEVAPPDGLRTLTSYQRKEEQAV SMQSSVSKSYIEVTPGLGHVPQQNGLSGLPETPEAHRMMPMNRTAKPFPGSGHQAATPFS PTRNVTSPVAGFPAPPPYSAVTPPPPEAFSRGVSSPTGGPAPPPPWPQPAPWSQLAFYDA PERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNAEGKRGA GAGTDSGPEEDYLSLGAEACNFMQGASAKQKTPPPVAPKPAVRSSPSQPPTPVSPVWAPG GASTQPPAFPTPSPSQGTVVSSIKVTQPSYPPARPASVQNLAGPFPVQRAAVASQNYIPK PSTGPTPTANTTAYAGSVGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAQ SPTPSLPASWKYSSNVRAPPPMAYNPIHSPSYPLAALKSQASGPQAAKTSKKKGKKPLNA LDVMKHQPYQLNASLFTFQPPDAKDSLPQKSTVKISSVPAMTMKQALPPRPLSASSPTNA QASSVYSVPAYSSQPAYFAEASSPASASPVPVGLPTSPKQGSASPSYFVAPRPKFSAKKS GVTVQVWKPSVVEE NT seq 3285 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggacttcatctgcatttccatgaccggaggggcgccctggggcttcagg ctgcaaggcggcaaggagcagaagcagcccttacaagtggccaagattcgaagccagagc aaagcctccgggtctggactctgtgagggagatgaagtggtttctattaatggaaacccc tgcgcagacctcacctacccagaagtcatcaagctcatggagagcgtgacggactctctc caaatgctcgtcaaaagatctccgagtgggataaatgagactttgatccctgaagctgaa aaccaaaaccacaagcttctcacccgtgaggggtgcgtggaaagtaccaccctgcagatt cgaccggccacaggcagccaatgcaaagagttctccagcagcccggccccccacagaatc cccgtggccgaggacggagagagtggtccagactgctcgggaagtgtaaaagaagaccca gcctcccctggggctccccacacagtggaattccgcagaggatgcttagcagaggagact gtcctaagcggggaggtgcaagcagggctgcctgagtctccggttgaattccagttgtcc cttccgcaggagaggcacgagggctccagtgccccaggggaggctcccctcgaagccgaa aaatctcagtctcctgacccaactccccccttccagcatgacagtgctgccccactccag ccagtgcctgccgaggagccccggggcctttccctgagatccagcaagacaatccagctc tccagtggcctggacttgacagcaatcccggacagggaagcaggcaacgtggggctgtcc cgagtggacgtgctcctcaactgctctgccaggcagcagacggaagggtacaggctccag gcaggaaaggggtgtgtggactctccaggggaaggagggcagtccgaagcacctccttct ctggtatcctttgcagtctcctcagaaggcaccgagcagggggacgagccccactcggaa agggatcacagcagacctcacaagcacagagcgcgccacgcacggctccggaggagtgaa agcctatcggaaaagcaggtgaaagaagccaaatctaaatgcaaaagtatcgctctcctg ctaacagatgccccgaaccccaactccaagggggtgttgatgtttaagaagcggcggcgc agggccaggaagtacaccctcatcagctacgggacaggggagctcgaccgaggggcgggc ggggaggaggaggaggaaggcgaccccgaggccatctctgaagtggccttcctgggtgcc agcgagtcggaggtggacgaggagctcctctcggacaccgagggcagcagacccgttgtg aacttcgactgggattctggactggtggacatcgagaagaagctgaaccgaggagacaga atggagacgctgccggacaccgcaggcaagggggccctcatgttcgccaagaggagggag aggatggatcagatcacagcccaacaagaagaggaaagggggggcggcatgcccgaggtt gccccgcccgatggcttgagaaccctgacttcttaccagaggaaggaggagcaggccgtg agcatgcagagctccgtgagcaaaagctacattgaggtgacaccggggctgggccacgtg ccgcaacagaatggcttgagtgggctgcccgagaccccagaagcccaccggatgatgccc atgaacagaacggccaaacccttcccggggtccggacaccaggcagcgacccccttctct cccacccgaaacgtgacaagtcccgttgctggctttcctgcccctccgccttattctgca gtcacccctcctcctccagaggccttctcccgaggagtatcgagtcccaccggtggccca gcaccgccacctccatggccgcagcctgctccctggtcccagctggccttctacgacgcc cccgagcgcattgcttcccgggatgagaggatcgcagtgccagccaagagaacgggcatc ctgcaggaagccaagaggagaagcactaccaaacccatgttcacatttaaggagcccaaa gtgagccccaaccccgagctcctgtcgctgctgcagaatgcagaaggtaagcggggtgcc ggagccggcaccgactcgggacctgaagaagactacctgagtttgggcgctgaggcttgc aacttcatgcagggtgcctctgctaaacagaagaccccgccacccgtggccccgaaacct gcagtaaggtcatccccttcccagccaccgactccagtctctccggtctgggcgccagga ggagcctctacccagcctccagccttccccacgcccagcccctcgcagggcaccgtggtc tcctctatcaaagtcacccagccttcctaccctccggccaggcccgcgagcgtccagaac ctggcaggtcccttcccggtccagagggcggcagtggccagtcagaattacatacccaag ccatcaactggtcccaccccaacagcaaacactactgcttatgccgggtcagtgggacca tccaacgagcttccaggaatgagcgggaaaggagcccagctctttgccaagcggcagtcc aggatggagaagtatgtggttgattctgacacagtgcaggcgcatgcggcccgggctcag tctcccaccccgtcgcttcctgccagctggaagtactcgtccaatgtccgggcacctcct cccatggcctacaaccccatccactctccctcctacccactggctgctctcaaatcacag gcctcaggcccacaagccgccaaaacgagcaagaaaaagggcaaaaagcccctcaatgct ttggatgtcatgaagcaccaaccatatcagctcaacgcatccttgttcactttccagcca cctgatgccaaggatagcctcccccagaagtcaactgttaagatcagttccgtgccggcc atgaccatgaagcaagcccttcctccccggcccctgagtgctagctcacccactaacgcg caggcctcatccgtgtactctgttccagcctatagctcccagcctgcctactttgcagag gccagctccccagccagcgcctccccggtgcccgtgggccttcccacgtctcccaagcaa ggatcagcctcaccatcttattttgtggcaccgagaccgaagttctcagccaagaaaagc ggtgtcacagttcaggtgtggaaaccgtcagtggtggaagagtaa

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