Sorex fumeus (smoky shrew): 130026359
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Entry
130026359 CDS
T10594
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130026359 (TOPORS)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130026359 (TOPORS)
UBL E3 ligases
130026359 (TOPORS)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130026359 (TOPORS)
Cilium and associated proteins [BR:
sfum03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130026359 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130026359
NCBI-ProteinID:
XP_055973105
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MLSPPRMSWLVEQGSPQPPGSPLSREEGEAPRPAPAPEGRRRSRRVRLRGSCRHRPSLLG
RRELAASTPTGPEPGSTEIMASATKEFKMDSFSPKAGTSKLQQTVPADASPDSKCPICLD
RFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYN
GSFATPDVRRFRYRTTMTRERERERERSNSVYSPSSTVNRRTTTPPDSGVVFEGLSISAG
LRNNDLIRQASLRRPTTVADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISA
EFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPF
LLNRTEHFIHEFISFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAEPQE
LDINIATVSQAPWDDETPGPSYSSSEQVHAAISSLLNSSDSSDDELVSARATSQIQGVQT
NEDLNNDSDSSSDNCVIVGFVKPLAERTPELVELSSDSEELGSYEKMETAKTQEQEQSYS
SGDSDVSRCSTPRSVLGKDEQINKGHCDSVTRIRSKNEEKRSTSLSSPRDLSLSIRGDRV
YSPYNHRHRRRGRSRSSDSRSQSRSDQKNHRKHHEKKRMKSKRSRSRDSSRPRSRRDKKR
SRTRESSWSRRSQTLSLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNFGSRYKWEYT
YYSRNKDRDGYESSYRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYE
RHRSRSLSSSRSKTASTGPDRVRNEKPGGKRKYKTRHLEGTSEVAQTSRDFASKVKESHY
QKSSSKLDGNYKNESDSFSDSRSSDRETKQKRKKRRTRSLSVEIVYEGKATDTTRHHKKK
KKKHKRKHKKHHGDNASRSPVVITIDSDSDKDSEVKENTECNNSGPQDPLQTEFLAPSLQ
PVETKDVVTIDDEFGVLDRECDITSLDTNRTVNSTPPQITSVEQTLDVREESTFTSDLEN
QPSNMSIQTEPSLQLPSPRTSLMPVSLGGDCDLS
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccctccgaggatgtcatggcttgtggaacagggttcgccgcagccgccgggg
tctccgctgtctcgcgaggagggtgaagcgccccggcccgcgcccgctcccgagggccgg
cggagaagtcgccgggtgcgtctccgcggatcctgccgtcaccgacccagcctattgggc
cgccgggagctcgccgccagcaccccgaccgggccggagccgggctccaccgagataatg
gcatcggctaccaaggaatttaaaatggatagcttttcacctaaagctggtactagcaaa
ttgcaacagacagtaccagctgatgcatctcctgattcgaagtgtcctatatgtttggat
agatttgataatgtgtcttacttagaccgctgcttacataagttctgttttcgctgtgta
caggagtggtcaaaaaacaaagctgaatgtccactatgtaaacaaccttttgactctatt
ttccattctgtgcgggcagaagatgacttcaaggaatatgtcctaaggccttcatataat
ggatcttttgctacccctgatgttcgaaggttccgctatcgcacaactatgacaagggaa
cgggaacgggaacgggaacgaagtaattctgtttattcacctagtagtactgtgaataga
agaacaactactccaccagatagtggagtggtatttgaagggttaagcatttcagcagga
cttagaaataatgaccttataagacaggcttcactaaggagaccaaccacagttgcagat
gaacgatctttgcggaaaatacaagagcaggatattataaatttcaggcgaactctctat
cgggctggtgctcgtgttagaaatattgaagatggtggccgctacagggatatttctgct
gaattttttcgtagaaatccagcttgtcttcatagattagttccctggttaaaacgagaa
cttacagttctttttggagctcatggttctttagtgaatattgtacagcacatcatcatg
agtaatgttactcgctatgacttagagagtcaggcatttgtatctgatttaagaccattt
ttacttaatcggaccgaacattttatacatgaatttatcagttttgctcgatctcctttt
aacatggcagcctttgaccagcatgctaattatgattgccctgccccttcatatgaagaa
ggtagtcattctgattcttcagtcataacaatttctccagacgaagctgagccccaagag
ctggatattaatatagccactgttagtcaagcaccatgggatgatgaaactccaggacca
tcttactcaagctctgaacaggtacatgctgctatatcttcccttttaaattcttctgac
agttcagatgatgaacttgtatcggcaagggccacatctcagatacaaggagtacaaacc
aacgaggacctaaataatgacagtgattcttcctcagataattgtgtcattgttgggttt
gttaaaccactagctgagagaaccccagaacttgttgaactatcttctgattctgaggag
ttaggctcttacgagaaaatggagacagcgaagacacaagaacaagagcagtcttacagt
tcgggcgatagtgatgttagtagatgttcaactccacgctctgtccttggaaaggatgag
caaataaataaaggccactgtgattctgttacaagaatcagatcaaagaatgaggaaaaa
cgatctacatcactgtcatctcccagagacctgagcttatctatcagaggagacagggta
tattctccttataaccatagacaccggaggaggggacgatcaagaagttcagattcacgt
tcacagagtagaagtgatcagaagaatcataggaagcatcatgagaagaaaagaatgaaa
agcaaacgatccagaagcagagatagtagccgacctagaagtagaagagacaaaaagaga
tcacgaactagagagagcagttggtccagaagaagccaaactttgtctttaagtagtgaa
agcacaagcagatccaggtctcgcagcagtgatcatggtaaaagaagatcacgaagcaga
aatagagatcgttattacttaagaaataattttggaagcagatataagtgggagtatacc
tactatagtagaaataaggacagagatggttatgaatcatcttacaggaggaggacacta
tccagagctcattattctagacaatcttcaagtccagaatttagaattcagtctttttct
gaaagaacaaatgctcgaaaaaaaaataatcacagtgaaaggaaatattattactatgaa
agacacagatcaaggagcttatctagtagtagatcaaagactgcatctacaggacctgac
cgggtaagaaatgaaaaacctggagggaaacgaaaatataaaacacgtcatttggagggt
actagtgaagtagctcagacatctcgagactttgcctctaaagttaaggagagtcattac
caaaagtcttcatcaaaattggatggaaactacaaaaatgagagtgacagcttttcagac
agccgatcatcagacagagaaacaaaacaaaagaggaagaaaaggagaacccggagtcta
agtgtagagatagtctatgaaggaaaagccaccgatacaactagacatcataaaaagaaa
aagaagaaacacaagaggaagcataagaaacatcatggggataatgcttcacgttctcca
gttgtcatcactattgatagtgatagtgataaggattctgaagtaaaggagaatacagaa
tgtaacaatagtggtcctcaagaccctctacagactgagtttttggcaccatccttgcag
ccagttgaaactaaagatgtagttacaatagacgatgaatttggtgttctggacagggag
tgtgacattacttcactcgatactaacagaactgtaaatagtactccaccacagataact
tcagttgaacaaactcttgatgttagagaagaaagcacctttacctctgatttggagaac
cagccgagtaatatgtctattcaaactgagccatcattacaattgccatctccacggaca
tcattaatgccagtgtctcttggtggagactgtgatttgtcttaa
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