| Entry |
|
|---|
| Symbol |
VCP
|
|---|
| Name |
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
|
|---|
| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
|
|---|
| Organism |
sfum Sorex fumeus (smoky shrew)
|
|---|
| Pathway |
| sfum04141 | Protein processing in endoplasmic reticulum |
| sfum05022 | Pathways of neurodegeneration - multiple diseases |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:sfum00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130026364 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130026364 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
130026364 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130026364 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
130026364 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sfum03019]
130026364 (VCP)
03009 Ribosome biogenesis [BR:sfum03009]
130026364 (VCP)
04131 Membrane trafficking [BR:sfum04131]
130026364 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:sfum04147]
130026364 (VCP)
Messenger RNA biogenesis [BR:sfum03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130026364 (VCP)
Ribosome biogenesis [BR:sfum03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
130026364 (VCP)
Membrane trafficking [BR:sfum04131]
SNARE
SNARE associated proteins
Others
130026364 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130026364 (VCP)
Exosome [BR:sfum04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130026364 (VCP)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
806 aa
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG |
|---|
| NT seq |
2421 nt +upstreamnt +downstreamnt
atggcctccggagctgattcaaaaggtgatgatttatctacagccattcttaaacagaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtca
ctgtcccagcccaagatggatgaactccagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgcgtacgcctaggggatgttatc
agcatccagccatgccctgatgtgaagtacggcaaacgtatccatgtgctacccatcgat
gacacggtggaaggcatcactggcaatctcttcgaggtttatctaaagccgtacttcctg
gaagcttaccgacccattcggaaaggagacatttttcttgtccggggtggaatgcgtgct
gtagaattcaaagtagtggagacagatcccagtccttattgcattgttgctccagacaca
gtgatccactgtgaaggggaacccatcaaacgagaggatgaggaagagtctttgaatgaa
gtaggctatgatgacattggtggctgcagaaaacagctagcccagattaaggagatggtg
gagctgccactgagacatcctgccctctttaaggcaattggtgtgaagcctcctcgagga
atcctactctatggacctcctgggactgggaagacactgattgctagagctgtggcaaat
gagactggagccttcttcttcttgattaatggtcctgaaatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggcagagaaaaatgctccagctata
attttcattgatgaactagacgccattgctcccaaaagagagaagacccatggggaggtg
gagcgacgtattgtatcacagttgttgacccttatggatggcttaaagcagagagcccat
gtgattgttatggcagcaaccaacagaccaaacagcattgacccagccctacgacggttt
ggtcgttttgacagggaggtggatattggaattcctgatgccacaggacgtttggaaatt
cttcagattcacacaaagaacatgaagttggcagatgatgtggacctagaacaggtagcc
aatgagactcatgggcatgtgggtgctgacttggcggcgctgtgctctgaggccgctctg
caggccatccgcaagaagatggatcttattgatttagaggatgagaccattgatgctgaa
gtcatgaactccctggcagttactatggacgacttccggtgggccctgagccagagcaat
ccatcagcattgcgggaaaccgtagtggaggtgccacaggttacctgggaggacatcggg
ggcctggaggatgtcaaacgtgaacttcaggagctggtccagtatcctgtggaacaccca
gacaaattcctcaagtttggcatgacaccctccaagggagttctgttctatggacctcct
ggctgtgggaaaactctgttggctaaagccattgctaatgagtgccaggccaacttcatc
tccatcaagggccctgagttgctcaccatgtggtttggggagtctgaggccaatgtcagg
gaaatctttgacaaggctcgccaagctgccccatgtgtattgttctttgatgagctggat
tcaattgccaaagcccgtggtggcaacattggagatggtggtggggctgctgatcgagta
atcaaccagatactgacagaaatggatggcatgtctacaaaaaagaatgtgtttatcatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctgcgacctggtcgccttgat
caactcatctacatccctcttcctgatgagaaatctcgtgttgccatcctcaaggccaac
ctacgcaaatccccagtagccaaggatgtggatctggagttcttggctaagatgactaat
ggcttctctggagctgacttgacagagatttgccaacgtgcttgcaagcttgccattcgt
gaatccattgagagtgagatcaggcgagaacgggagagacagacaaacccatcagccatg
gaggtagaagaagatgatccagtgcctgagattcgccgagatcactttgaggaagccatg
cgttttgcccgccgttctgttagtgacaatgacattcggaagtacgagatgtttgctcag
actcttcagcaaagtcggggctttggcagcttcagattcccttcaggaaaccagggtgga
gctggccccagtcagggcagtggaggtggcacaggtggcagtgtgtacacagaagacaat
gatgatgacctgtatggctaa |
|---|
