Sorex fumeus (smoky shrew): 130026364
Help
Entry
130026364 CDS
T10594
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04137
Mitophagy - animal
sfum04141
Protein processing in endoplasmic reticulum
sfum05014
Amyotrophic lateral sclerosis
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130026364 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130026364 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
130026364 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130026364 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
130026364 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130026364 (VCP)
03009 Ribosome biogenesis [BR:
sfum03009
]
130026364 (VCP)
04131 Membrane trafficking [BR:
sfum04131
]
130026364 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130026364 (VCP)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130026364 (VCP)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
130026364 (VCP)
Membrane trafficking [BR:
sfum04131
]
SNARE
SNARE associated proteins
Others
130026364 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130026364 (VCP)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130026364 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
130026364
NCBI-ProteinID:
XP_055973112
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagctgattcaaaaggtgatgatttatctacagccattcttaaacagaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtca
ctgtcccagcccaagatggatgaactccagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgcgtacgcctaggggatgttatc
agcatccagccatgccctgatgtgaagtacggcaaacgtatccatgtgctacccatcgat
gacacggtggaaggcatcactggcaatctcttcgaggtttatctaaagccgtacttcctg
gaagcttaccgacccattcggaaaggagacatttttcttgtccggggtggaatgcgtgct
gtagaattcaaagtagtggagacagatcccagtccttattgcattgttgctccagacaca
gtgatccactgtgaaggggaacccatcaaacgagaggatgaggaagagtctttgaatgaa
gtaggctatgatgacattggtggctgcagaaaacagctagcccagattaaggagatggtg
gagctgccactgagacatcctgccctctttaaggcaattggtgtgaagcctcctcgagga
atcctactctatggacctcctgggactgggaagacactgattgctagagctgtggcaaat
gagactggagccttcttcttcttgattaatggtcctgaaatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggcagagaaaaatgctccagctata
attttcattgatgaactagacgccattgctcccaaaagagagaagacccatggggaggtg
gagcgacgtattgtatcacagttgttgacccttatggatggcttaaagcagagagcccat
gtgattgttatggcagcaaccaacagaccaaacagcattgacccagccctacgacggttt
ggtcgttttgacagggaggtggatattggaattcctgatgccacaggacgtttggaaatt
cttcagattcacacaaagaacatgaagttggcagatgatgtggacctagaacaggtagcc
aatgagactcatgggcatgtgggtgctgacttggcggcgctgtgctctgaggccgctctg
caggccatccgcaagaagatggatcttattgatttagaggatgagaccattgatgctgaa
gtcatgaactccctggcagttactatggacgacttccggtgggccctgagccagagcaat
ccatcagcattgcgggaaaccgtagtggaggtgccacaggttacctgggaggacatcggg
ggcctggaggatgtcaaacgtgaacttcaggagctggtccagtatcctgtggaacaccca
gacaaattcctcaagtttggcatgacaccctccaagggagttctgttctatggacctcct
ggctgtgggaaaactctgttggctaaagccattgctaatgagtgccaggccaacttcatc
tccatcaagggccctgagttgctcaccatgtggtttggggagtctgaggccaatgtcagg
gaaatctttgacaaggctcgccaagctgccccatgtgtattgttctttgatgagctggat
tcaattgccaaagcccgtggtggcaacattggagatggtggtggggctgctgatcgagta
atcaaccagatactgacagaaatggatggcatgtctacaaaaaagaatgtgtttatcatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctgcgacctggtcgccttgat
caactcatctacatccctcttcctgatgagaaatctcgtgttgccatcctcaaggccaac
ctacgcaaatccccagtagccaaggatgtggatctggagttcttggctaagatgactaat
ggcttctctggagctgacttgacagagatttgccaacgtgcttgcaagcttgccattcgt
gaatccattgagagtgagatcaggcgagaacgggagagacagacaaacccatcagccatg
gaggtagaagaagatgatccagtgcctgagattcgccgagatcactttgaggaagccatg
cgttttgcccgccgttctgttagtgacaatgacattcggaagtacgagatgtttgctcag
actcttcagcaaagtcggggctttggcagcttcagattcccttcaggaaaccagggtgga
gctggccccagtcagggcagtggaggtggcacaggtggcagtgtgtacacagaagacaat
gatgatgacctgtatggctaa
DBGET
integrated database retrieval system
