Sorex fumeus (smoky shrew): 130026380
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Entry
130026380 CDS
T10594
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03410
Base excision repair
Brite
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
130026380 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
130026380 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
130026380 (APTX)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130026380 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
130026380 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130026380
NCBI-ProteinID:
XP_055973136
LinkDB
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Position
Unknown
AA seq
343 aa
AA seq
DB search
MMRACWLVRQDNRHQRIKLPHLEVIVLGRSPETKITDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSVIIGKDQEVKLQPGQVLHMVNELYPYIIEFEEESTSSGPMTPRKRKRSGN
RDSLESNAAPEPEPGTRLESGIHSSQCSVSPKKSKDDASTKKESLGHWSQGLKVSMQDPK
MQVYKDEQVVVIKDKYPKARYHWLVLPWASISSLKVVSREHLQLLKHMHSVGEKVIADHA
GASEVRFRLGYHAIPSMSQVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVVEMIQE
SGRVTVRDGMPELLKLPLRCHECQQLLPSMPHLKEHLKKHWSK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggcgtgctggttggtgaggcaggacaatcggcaccaacgaatcaagcttcca
catctggaagtgattgtgcttgggcgcagccccgagaccaagatcacagacaagaaatgt
tcccgccaacaagtacaattgaaagcagaatgtaataaaggctatgtcaaggtgaagcag
gtcggggtcaatcccaccagcattgactcagtcataattgggaaggaccaagaagtgaag
ctgcagcctggccaggttctccacatggtgaatgagctttatccatatattatagagttt
gaggaagagtcaacgagctctggtccgatgacacccaggaagagaaagaggtcaggcaac
agggattctttagaaagtaatgctgctccggagcctgagcctgggactagactggagtct
gggatccactctagccaatgctctgtttccccaaagaagagcaaagatgatgcatctacc
aagaaggaatcattgggccactggagtcaaggcttgaaggtttctatgcaggacccaaaa
atgcaggtttacaaagacgagcaggtggtggtgatcaaggataaataccccaaggctcgg
taccactggctggtcttaccgtgggcgtccatttccagtctgaaggttgtgagcagggag
caccttcagctgctcaaacacatgcactccgtgggggagaaggtgattgcagaccatgct
ggcgccagtgaggtccgtttccgactgggctaccatgccattcccagcatgagccaagta
caccttcacgtaatcagccaggattttgattctccttgtcttaaaaataaaaagcattgg
aattctttcaatacagaatacttcctagaatcacaagctgtggtggagatgatacaggaa
tctggcagagtgacagtccgagacgggatgcctgagctcttgaaactgcccctccgttgt
cacgagtgccagcagctgctgccttccatgcctcatctgaaagagcatctcaagaagcac
tggtcgaagtga
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integrated database retrieval system