Sorex fumeus (smoky shrew): 130026400
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Entry
130026400 CDS
T10594
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130026400 (RNF20)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130026400 (RNF20)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
130026400 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
BRE1
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130026400
NCBI-ProteinID:
XP_055973163
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MSGIKRAAGESGTSMPPEKKAAVEDSGTTVETIKLGGVSSTEELDIKTLQTKNRKLAEML
DQRQTIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEHGLGDLLT
ERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVESSR
RAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQENMRLQELTDLLQEK
HHTMSQEFSKLQSKVETAESRVCVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVNSK
GYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDLEEVTTQNEK
LKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQVEL
IERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISS
LQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKQDSED
LPSQSSASKASQEEVNEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEK
ERDSAKDKEKGKHDDIRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQ
LMAAEKKSKAELEDLRQRLKELEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAMAK
QEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKE
ELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKALEAAQ
LADDLKTQLELAQKKLHDFQEEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPDNV
PKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNA
AFGANDFHRIYIG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaataaaaagagcagctggagagtctggcacatccatgcctccggagaagaag
gcagctgtggaagactcagggaccacggtggagaccataaaactaggaggtgtttcttca
acggaggaattagacattaaaacactgcaaaccaagaatcgcaagctggcggaaatgctg
gatcaacggcagaccattgaagatgaactccgtgagcacattgaaaaactggagcgaagg
caggctactgatgatgcctcattgctgatcgtcaaccgctactggagtcagtttgatgaa
aatatccgtatcatccttaaacgctatgatttggagcatggtttgggagacctcctcaca
gaaagaaaagcccttgttgtgcctgagccagaaccagactctgatagcaaccaggagcgg
aaagatgatagagagagaggggaagggcaagaaccagctttctctttccttgctactttg
gccagtagttccagtgaagagatggaatctcagcttcaggagcgtgtagagtcttcccgt
cgagctgtgtcccagattgtgaccgtctatgataaattgcaagagaaagtggagctctta
tcgcgaaagctaaatagtggagataatctgatagtggaggaagcagtacaggagctgaat
tccttccttgcacaagagaatatgagactgcaggaattgacagacctccttcaggagaag
catcacaccatgtctcaggagttctccaagctgcagagtaaagtggaaacagctgaatcc
cgagtgtgtgtcctggagtccatgattgatgacctacagtgggatattgacaaaattcga
aagcgggagcagcgactcaacagacacttagcagaagttctagaacgggtgaattcaaaa
ggttataaagtctatggtgcgggtagcagtctttatggaggcacaatcaccatcaatgct
cggaagtttgaggaaatgaatgcagagcttgaggagaacaaagagctggctcagaaccgg
cactgtgagctggagaaacttcgtcaagaccttgaggaagtcactacacagaatgaaaaa
ctgaaggtggaattgcggagtgcagttgaggaggtggttaaggagaccccagaatatcgc
tgcatgcagtcacagttctctgttctgtacaacgagagcctgcagttgaaagcacacttg
gatgaggctcggaccctgcttcatggcactagagggacccaccagcgccaggttgaactc
attgagcgagatgaggttagtcttcataagaagctgaggactgaagttatccagctagaa
gatacactggcccaggttcgcaaggaatacgaaatgctgcggatagaatttgagcaaacc
cttgctgccaatgaacaagcaggtcccataaatcgggagatgcgtcaccttatcagtagc
ctccagaatcataatcaccagctgaaaggggaggtcctaagatacaagcggaaactgaga
gaagcccagtcagacctgaacaagacacgtctgcgcagtggcagtgccctcttgcagtct
cagtctagtactgaggaccctaaagatgaacctgcagagctaaaacaagattctgaagac
ttacccagtcagtcctctgcatcaaaggcatctcaggaggaagttaatgaaattaagtcc
aaacgggatgaagaagaacgagaacgagaaaggagggagaaagagagagagcgagaaaga
gagagggagaaggaaaaggaaagagaacgagagaagcagaaattaaaagagtcagaaaaa
gagagagattctgctaaggacaaagagaaaggaaaacatgatgatataaggaaaaaggaa
gcagaaattatcaaacaactgaagattgaactcaaaaaggcacaggaaagccaaaaggag
atgaaactattactagatatgtacaggtcagccccaaaggaacagagagacaaagttcag
ctaatggcagctgagaagaagtctaaggcagagttggaagatctaagacaaagactcaag
gaactagaggataaagagaaaaaagaaaacaagaaaatggctgatgaggatgccttaagg
aagatccgggcagtcgaggagcagatagaatacctgcagaagaagctggccatggccaag
caggaggaagaagctctcctctctgagatggatgtcacaggccaggcttttgaggacatg
caggaacaaaatatccgtttgatgcagcagttgcgggaaaaggatgatgcaaatttcaag
cttatgtcagaacgtattaagtccaatcagatccataagttgcttaaagaagagaaggag
gaactagcagaccaggttttgactttgaagacgcaggttgatgcccagttacaggtagta
aggaagttggaagagaaggagcatctattacaaagcaacattggcacaggggaaaaagaa
ctgggtcttaggacccaagccttagagatgaataaacgcaaggctctggaagcagcccaa
cttgcagatgaccttaaaacacagttggagttagcgcagaagaaactgcatgattttcag
gaggagattgtggagaacagtgtcaccaaagaaaaggacatgttcaatttcaaacgagcc
caggaggacatctccagacttcgaaggaagctggagacaacaaaaaaaccagacaatgta
cccaaatgtgatgaaattctaatggaggagattaaggattacaaggcacgtctgacctgt
ccatgttgtaacatgcgtaaaaaggatgctgtacttaccaagtgttttcatgttttctgc
tttgagtgtgtgaagacacgctacgatactcgccaacgcaaatgtcccaagtgtaatgca
gcttttggtgccaatgatttccatcgcatctacattggttga
DBGET
integrated database retrieval system
