KEGG   Sorex fumeus (smoky shrew): 130026820
Entry
130026820         CDS       T10594                                 
Symbol
CCNT2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03250  Viral life cycle - HIV-1
sfum05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130026820 (CCNT2)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    130026820 (CCNT2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfum03021]
    130026820 (CCNT2)
Transcription machinery [BR:sfum03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130026820 (CCNT2)
    Brd4/P-TEFb complex
     130026820 (CCNT2)
    7SK RNP complex
     130026820 (CCNT2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB BUR2_N
Other DBs
NCBI-GeneID: 130026820
NCBI-ProteinID: XP_055973507
LinkDB
Position
Unknown
AA seq 733 aa
MASGRGASSRWFFTREQLENTPSRRCGMEADKELSSRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFSRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDT
KCDAYLQQTQELVLLETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEF
LQILEKTPNRLKKIRNWRADQAASKKPKVDGQVSEKPLLGSSLVQNSILVDSATGVPTNP
SFQKPSTSAFPAPVSLNSGNISVQDSHTSDNLSMLATGMPSTSYGLSSHQEWPQHQESAR
TEQMYSQKQETSLSGSQYNINFQQGPSLSLHSGLHHRPDKIPDHSSVKQEYTHKAGSSKH
HGPISATPGVIPQKMSLDKYREKRKLETLDPDVRDHYIAAQVEQQHKHVQSQAASSSSVT
SPIKMKIPISSSEKSDKFMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHS
SSDEGSGKSKHSSPHINRDHKEKHKEHLSNRHHLSSHKHSHMHSGSSSGGSKHSADGIPP
TVLRSPVGLSSDGISSSSSSSRKRLHINDASHNHHSKMSKSSKSSGSSSSSSSVKQYISS
HNSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVETNGPDVNHEYSTNSQHMDYKDTFD
MLDSLLSAQGMNM
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggcgtcgggccgtggagcctcttctcgctggttcttcactcgggagcagctggagaac
acgccgagccgccgttgcgggatggaggcggacaaagagctctcgagccgccagcaggcg
gccaacctcatccaggacatggggcagcgcctcaacgtctctcagctgacaataaacact
gcgattgtttatatgcacaggttttatatgcaccattctttcaccaaattcagtagaaat
attatatcacctactgcattatttttggctgcaaaagtggaagaacaagctcgaaaactt
gaacatgttatcaaagtagcacatgcttgtcttcatcccttagaacccctgctggatact
aaatgtgatgcttaccttcaacagactcaagaactggttttacttgaaaccataatgcta
caaaccctaggttttgagatcaccatcgaacatccacacacagatgtggtgaaatgtacc
cagttagtaagagcaagcaaggatttggcacagacatcctatttcatggctaccaacagt
ctgcatcttacaaccttctgtcttcagtacaaaccaactgtgatagcatgtgtgtgcatt
catttggcttgcaaatggtccaattgggagattcctgtgtcaactgatggaaaacattgg
tgggaatacgtggatcctacagtaactctagaattactagatgagctaacacatgagttt
ctacaaatattggagaaaacgcctaataggttgaagaagattcgaaactggagggcagat
caggcggcttctaagaaaccaaaagtagatggacaagtatcagagaagccacttcttggt
tcatctttggtccagaattccattttagtagacagtgctactggtgtgcctacaaaccca
agttttcagaaaccatctacatcagcatttcctgcaccagtatctctgaattcaggaaac
atttctgttcaggacagccatacatctgataatctatcaatgctggccacgggaatgcca
agtacctcatatggcttgtcatcacatcaagaatggcctcagcatcaagaatcagcaagg
acagaacagatgtattcacagaaacaggagacatctttgtctggtagccagtacaacatc
aacttccagcagggaccttctctttcactgcattcaggattgcatcacagacctgacaaa
atacctgatcactcatctgttaagcaggaatatactcataaagcagggagcagtaaacac
cacgggccaatttctgccactcctggagtaattcctcagaaaatgtctttagacaaatac
agagaaaagcgtaagctagaaacccttgatccggatgtcagagatcattatatagctgcc
caggtagaacagcaacacaaacacgtacagtcgcaggcagccagcagcagttctgtgact
tctcccattaaaatgaaaattcccatctcaagttctgaaaaatctgacaagtttatggca
gataaaaaggaaaagagtggatcgctgaagttacggataccaataccacccactgataaa
agtgccagtaaagaagaactgaaaatgaaaataaaagtttcttcctcagaaaggcacagc
tcttctgacgaaggcagtgggaagagtaagcattcaagcccacatattaaccgagaccat
aaggagaagcacaaggagcatctatcaaatcgccatcacctcagcagtcacaagcattcc
cacatgcatagtggcagcagcagtggtggtagtaaacacagtgctgatggaatacccccc
actgttctgaggagtcctgttggcctgagcagtgatggcatttcctctagttcgagctct
tcgaggaagaggctgcatatcaatgatgcatctcacaaccatcactccaaaatgagcaaa
agttccaaaagttcaggtagttcatctagttcttcctctgttaagcagtatatatcctct
cacaactctgtttttaaccatcccttaccccctcctccccctgtcacataccaggtgggc
tacggacatctcagcaccctcgtgaaactggacaagaaaccagtggagaccaacggtcct
gatgtcaatcacgagtacagtacaaacagccagcatatggactacaaagacacattcgac
atgctggactcgctgttaagtgcccaaggaatgaacatgtaa

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