Sorex fumeus (smoky shrew): 130027120
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Entry
130027120 CDS
T10594
Symbol
USP43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130027120 (USP43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130027120 (USP43)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130027120 (USP43)
Peptidases and inhibitors [BR:
sfum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130027120 (USP43)
Ubiquitin system [BR:
sfum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130027120 (USP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130027120
NCBI-ProteinID:
XP_055973745
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MQSVRNHRLGAVSVPGPRARAGLGARRGGAGPGRLLPPTGTPGAQVAASPFALQPEAAWP
SPRDWVALGAAPAPGFMEPGPGPAAGEGRPGSPFRRRFLGRLWSSFRPARSRRPARAPGS
APATPGDGGDSRARALRSASPGDGGDSRARILRSASPGDGGDSRARALRSASPADGGDSR
ARALRSASPADGGDSRARALRSASPADGGDSRARILRSASPGDGGDSRARALRSASPGDG
GDSRARILRPASPGDGGDSRARAPRSAFPGDGGDSRARALRSASPGDGGDGAARVPGAAE
RPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGRAEVTGQLAALVRALW
TRQYRPQLSAAFKNAVSKYGSQFQGNYQHDALEFLLWLLDRVHKDLENSPQGPRTQKLHR
KASKTSENCVSPSTQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLR
QTRFLSITLVFPSKSQKFLRVGLAVPILSTVAALRRMVAEEGGVPAHEVILVELCSTGLQ
RSFFDEDDLNTISEGDSVYAFQTSLPPVQEITSVQPSSLPLSPCMVTCEGQQLSMPTYSK
NKVLILFCNLVGSGQLATRFGPPFLIREDRAISWAQLQQRILSKVHPLMKSKASVQNLGS
LFSIRVVGLSVPCSYLSPQDKRPLYHWAVDRVLHLRKPGGPPHIKLAVEWDSWAKECLFG
NLQQEKVQDADSVWRQQRAHQQHSCTLDECFHLYTKEEQLAQDDAWKCPHCKVLQQGVMK
LSLWTLPDILIIHLKRFCQVRERRNKLSTLVKFPLSGLNMAPHMAKRSASAKSVLGPLPS
WKQPVCLPTSCPLDFLYDLYAVCNHHGSLQSGHYTAYCRNSLDGQWYNYDDTIVEKLRED
EVNTQGAYILFYQKRNSIPPWSASSSMKGSTCSSFSEHWLLRLGGNDNGTKESLLPWSSP
PGSPQPPGPESPLLTNHLSSHKMEGLESRLREKRTGGRSMSMKALTSSQGKQKTFKTLPS
RWSFGPKEKLPGASVELVEYLETRGRPQCTSQSIVSLLAGTAGENEKSTVPRSNTSAFAK
DEDGELINQCLLATAPHLLGHPSHCARDTGHLHTARKHKENSRPDIRLPKQFDLPLMVMP
SVEHEKHSCLEDQKTRSCQGSHSTASSAKGDLPSVELPRKGACNHRNPFTKMRTKTEGKV
WETDRFPQGTFTFLKSVFWKKENKKNDQVEVAPQVPPASLISGRLTLADSSSASLSPARG
HGTHLERDIHSAPASLRLARKVSRPIRGNALGASQRSVSGEQTSSSTLQKVKYRTLFLGQ
KKILPESSF
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggtaagaaatcaccgactcggggcagtctcggtgcccggcccccgcgccagg
gcggggctgggcgcgcggaggggcggggccgggccgggccggctcctccccccgacgggc
acacctggcgcgcaggtagccgcgtccccgtttgctctccagccggaagctgcgtggccg
tcgcctcgggactgggttgcgctgggggcggcgcctgctccgggcttcatggagccgggc
ccggggcccgcggcgggagagggtcgcccggggtccccgttccgccgccgcttcctgggc
cgcctgtggagcagcttccgccccgcgcgcagccgccgccccgcccgcgccccgggatct
gctccggccacccccggggacggaggggacagccgggcccgcgccttgcgctcagcgtcc
ccgggggacggaggggacagccgggcccgcatcttgcgctcagcgtccccgggcgatgga
ggggacagccgggcccgcgccttgcgctcagcgtccccagcggacggaggggacagccgg
gcccgcgccttgcgctcagcgtccccagcggacggaggggacagccgggcccgcgccttg
cgctcagcgtccccagcggacggaggggacagccgggcccgcatcttgcgctcagcgtcc
ccgggcgacggaggggacagccgggcccgcgccttgcgctcagcgtccccgggcgacgga
ggggacagccgggcccgcatcttgcgcccagcgtccccgggcgacggaggggacagccgg
gcccgcgccccgcgctcagcgttccccggggacggaggggacagccgggcccgcgccttg
cgctcagcgtccccgggggacggaggggacggcgccgcccgcgtcccgggcgctgcggag
cggccccccggcgcgcagggcctgaagaaccacggcaacacctgcttcatgaacgccgtg
gtgcagtgcctcagcaacaccgacctgctggccgagttcctggccctggggcgttaccgg
gcggccccaggccgcgccgaggtcaccgggcagctggcggcgctcgtgcgcgcgctctgg
acgcggcagtaccggccgcagctctccgccgccttcaagaatgctgtttctaagtatggt
tcccagttccaaggcaattaccagcatgatgccctggaattcttgctctggttactggat
cgtgtgcataaggacttggaaaactcaccacaagggccaaggacccagaagcttcatcgc
aaagctagtaaaacttctgagaactgtgtgtcaccatctactcagctttctttaggccaa
agctttgtacaaagccactttcaagcacaatatagatcttccttgacctgtccccactgc
ttgaagcagagcaacacctttgatcctttcttgtgtgtgtcactccccatccccctgcgc
cagacgagattcttgagtatcaccttggtgtttccttctaagagccagaagttcctgcgg
gttggcctggctgtgcccatcctcagcacagtggcggccttgaggaggatggtcgcagag
gaaggcggagtccctgctcatgaggtaatcttggttgaactgtgttccactggactccag
agatctttctttgatgaggatgacctgaatactatttctgaaggagatagtgtgtatgct
ttccagacctctctaccacctgtccaggagataacttcagttcagccatctagtctacct
ctctccccgtgtatggtcacctgtgaaggtcagcagttgtccatgcctacctatagcaag
aataaggtgctcatcctcttctgtaacctggtggggtcagggcaactggctaccagattc
ggtccacctttcctgataagggaagacagagccatctcttgggcccagctccaacagcgc
attcttagcaaggtccatcctctcatgaagagtaaggcctctgtacagaacctagggtca
ctgttctccattcgggttgtgggcctctccgtgccttgtagctacttgtctccacaggat
aaacgaccactctatcactgggcagttgacagagttctgcacctcaggaagccaggaggc
cctccacacatcaagctggctgtggagtgggatagctgggctaaggagtgcctgttcggg
aatctccagcaggagaaggtccaggacgcagacagtgtgtggcggcagcagcgggcacat
cagcagcacagctgtaccttggacgagtgttttcacttgtacaccaaagaggaacagctg
gcccaagatgatgcatggaagtgcccccattgcaaagtcctgcagcagggtgtgatgaag
ttgagtctctggacccttcctgacatcctaatcatccacctgaagcgattctgtcaagtg
agagagagaagaaacaagctctccacactggtgaaatttccactctctggtctcaacatg
gcacctcacatggccaagagaagtgctagtgccaagtctgtgctaggccctttgccttct
tggaaacaaccagtatgcctacccaccagttgcccgctggacttcctgtatgatttatat
gctgtctgtaaccaccatggtagtctacaaagtggacattacacagcttattgtcggaac
tctttggatggccagtggtacaattatgatgacaccatagtggaaaaacttagagaagat
gaagtcaatacccagggggcctacatcctcttctatcagaaacggaacagcatccctccc
tggtctgccagcagttcaatgaaaggttccacctgctcctccttctctgagcactggcta
ctgaggcttgggggcaatgacaacggcaccaaggaaagcctgctaccatggagctcaccc
cctgggtccccccagccccctggacctgagtcgcccctccttacaaaccacctctccagt
cataaaatggaaggattggaatccagactccgggagaaacgcacaggaggccgaagtatg
agcatgaaggcgctcacctcttcccaaggcaagcagaagacctttaagaccttgccctcc
aggtggtcttttggacccaaggagaagctacctggtgcatctgttgagttggtggaatat
ttggagaccagggggagacctcaatgtacgagccagtccattgtctcattgttggctggc
actgcaggtgagaatgagaaatcaacagtgcccaggtcaaacacctctgcctttgccaag
gatgaagatggtgaactaatcaaccaatgtttgctggccacagctccccacctcctgggc
catcctagccactgtgccagagacacaggtcatctacacacagcaaggaaacacaaggaa
aactcaaggccggatatcagacttccaaaacagtttgacctgcccctcatggtgatgccc
tctgtagagcatgagaagcattcgtgtctagaagaccagaagactagaagctgtcaggga
agccacagcacagcatcctctgccaagggagacctgccgtctgtggaattacctagaaaa
ggtgcatgcaatcaccgaaatcccttcaccaagatgaggactaaaacagaaggaaaggtt
tgggagacagacagattcccccaggggacgttcacctttctaaagtctgttttttggaag
aaggaaaacaagaagaatgaccaggtagaagtagctccccaggtacctccagcctctctc
ataagtgggagactgactctggctgacagttcatccgcttcactcagtccagccagggga
catggcacacacctagagagggatatccattcagctcccgcctctctccgccttgcacgc
aaagttagcaggccaataaggggcaatgctcttggtgcgtcacaaaggagtgtttcaggg
gagcagacctcttccagcaccttgcaaaaggtgaaatatcgcactctttttttaggtcaa
aagaaaatattaccagagtccagcttttaa
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