Sorex fumeus (smoky shrew): 130027169
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Entry
130027169 CDS
T10594
Symbol
HDAC7
Name
(RefSeq) histone deacetylase 7
KO
K11408
histone deacetylase 7 [EC:
3.5.1.98
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04613
Neutrophil extracellular trap formation
sfum05034
Alcoholism
sfum05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
130027169 (HDAC7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
130027169 (HDAC7)
09165 Substance dependence
05034 Alcoholism
130027169 (HDAC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130027169 (HDAC7)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130027169 (HDAC7)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130027169 (HDAC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
130027169
NCBI-ProteinID:
XP_055973783
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MDLQVGPRPAVEPPPERSLLSLQQPLPLRLFLAGLQHQPCPQLPMDASMPELPGHPEPEV
RQLLDKDKSKWSAVASREVRQKLAEVILKKQQAALETAVPYRASKPLETDGAPCPVLGSF
LPPVPGLSSDPPEHLPLRKTISEPNVKLRCKPKKLPEGRKNPLRRKGSAPSNLHLRRRPP
DTLGESSPSSSSTPTSGCSSPSDSKHGPHPVLGSEALSGQRPRLQETSRAPFALLPAITL
GLPAPARADGDLRTHLTPGPRGPVLGSPPAPLFLLPGLEPVLLLDPSVSHGPLLTVPGLG
PLPFHFAQSLLTTERLSGSGLHWPLSRTRSEPLPPSLEQLQPHVPVTERPAHPRETPGTR
ERPSAKALQADGGGSSGQPGDGGAEPREPECGQREARRPVPLACVPQVFLWEQQQRLARR
LPTGDSVLLSLTRGGHRPLSRTQSSPAAPALLPTSEPASQARVLSSSETSTGTLPFTTGL
VYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHS
ERHALLYGTSPLSRLKLDTRKLAGLRAERMFVMLPCGGVGVDTDTTWNELHTSNAARWAA
GSVTDLAFKVAARELKNGYAVVRPPGHHAEHSIAMGFCFFNSVAIACRQLQEQGKASKIL
IVDWDVHHGNGTQKTFYQDPSVLYISLHRHDNGNFFPGSGAVEEVGAGSGEGFNVNVAWA
GGLDPPMGDPEYLAAFRVVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGY
MTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPRSEEGWRQKPNLNAIR
CLEAVIRVHSKYWDCMQHLASCPDSWVTGASAEEMEVVTT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcaggtgggcccgcggcccgcggtggagcccccgccggagcgcagcctgctg
tccctgcagcagcccctgcccctgcgcctcttcctggcgggcctgcagcaccagccctgc
ccgcagcttcccatggacgcatcgatgcccgagttgccgggccacccagagccagaggtg
cggcagcttctcgacaaggacaagagcaagtggagcgccgtggccagcagggaggtccgg
cagaagctggcggaggtgatcctcaagaagcagcaggcggccctggagacagccgtgccc
tacagagcctccaagcccctggagacggacggagccccctgccccgtgcttggcagcttc
ctgccccctgtgccgggcctgtccagcgaccccccggagcacttacctctgaggaagaca
atctctgagcccaacgtgaagctgcgctgcaagcccaagaagcttccggaggggaggaag
aacccgctgcgcaggaaggggagcgccccgtccaacctccacctccgccggcggccccct
gacaccctgggagagtcctccccgagtagtagcagcacgcccacctcagggtgcagctcc
cccagtgacagcaagcacggcccccaccccgtcctgggctccgaggcgctctcgggccag
cggccacggctgcaggagacctctcgggcccccttcgccctgctgcctgcaatcacgctg
gggctgcctgcgcccgccagggctgacggtgacctcaggacccacctgactccgggcccc
cgaggacccgtcctggggagcccccctgcgcccctcttcctgctccccggcctggagccc
gtcctcctcctggacccctccgtgtcccacggccccctgctgaccgtgcccgggctcggg
cccctgcccttccactttgcgcagtccctgctgaccacggagcggctctccgggtctggc
ctgcactggccgctgagccggacccgctcggagcccctgcccccctccctggagcagctc
cagcctcacgtgccggtgaccgagaggccagcccatccccgtgagacgcctggaacgagg
gagagaccctcagccaaggccctgcaggcggacggcggcggcagcagcgggcagccgggg
gatggcggcgcggagcccagggagcccgagtgcggccagcgggaggccaggcggcctgta
cccttagcctgtgtcccacaggtgttcctatgggagcagcagcagcgcctggcccggcgg
cttcccacaggagactcggtgctgctgtccctgacccgcggtggccaccggcccctgtcc
aggacacagtcgtccccagctgcacctgccttgctgcccacctcagaacccgccagccag
gcccgtgtcctctccagttcagagaccagcactgggaccctgcccttcaccacagggctg
gtgtatgactcggtgatgctgaagcatcagtgctcctgcggagacaacagccggcacccg
gagcacgcgggtcgtatccagagcatctggtcgcggctgcaggagcgggggctgcggagc
cagtgtgagtgtctccggggccgcaaggcctcgctggaggaactgcagtctgtgcactcg
gaacggcacgctctgctctacggcaccagcccgctcagccgcctcaagctggacacccgg
aagctggcagggctccgggcagagcggatgttcgtgatgctgccctgcggcggggtcggg
gtggacacggacaccacttggaacgagctgcacacctccaacgctgcccgctgggccgcc
ggcagcgtcaccgaccttgccttcaaggtggctgccagagagctaaagaacggttatgct
gtggttcgacccccaggacaccatgcagagcattctatagccatgggcttctgcttcttc
aactcagtggccatcgcctgccggcagctgcaagaacagggcaaggccagcaagatcctc
attgtggactgggatgtccaccatggcaatggcacccagaagaccttctaccaggacccc
agcgtgctctacatctccctgcatcgccatgacaacggcaacttcttcccaggcagcggg
gctgtggaggaggtgggggctggcagtggtgaaggcttcaacgtcaacgtggcctgggct
ggaggtctggacccccccatgggggacccggagtacctggctgccttcagggtggtcgtc
atgcccattgcccgagagttcgccccggacctggtcctggtgtcggccgggtttgatgcc
gcggaaggtcaccccgccccgctgggcggctaccatgtttcagccaagtgcttcggctac
atgacgcagcagctgatgagcctggcggggggcgccgtggtgctggcactggagggcggc
cacgacctcacggccatctgcgacgcctccgaggcctgcgtggccgccctcctgggcaac
aaggtggacccgcgctcggaggaaggctggaggcagaaacccaacctcaacgccatccgc
tgcctggaagccgtgatccgggtgcacagtaaatactgggactgcatgcagcacctggct
tcctgtccagactcctgggtgaccggggccagtgcagaagaaatggaggtggtgaccaca
tag
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