Sorex fumeus (smoky shrew): 130027340 Help Entry 130027340         CDS       T10594                                  Symbol LAMB1 Name (RefSeq) laminin subunit beta-1   KO K05636   laminin, beta 1 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04151   PI3K-Akt signaling pathway sfum04510   Focal adhesion sfum04512   ECM-receptor interaction sfum05145   Toxoplasmosis sfum05146   Amoebiasis sfum05165   Human papillomavirus infection sfum05200   Pathways in cancer sfum05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     130027340 (LAMB1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130027340 (LAMB1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     130027340 (LAMB1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     130027340 (LAMB1)   09162 Cancer: specific types    05222 Small cell lung cancer     130027340 (LAMB1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     130027340 (LAMB1)   09174 Infectious disease: parasitic    05146 Amoebiasis     130027340 (LAMB1)    05145 Toxoplasmosis     130027340 (LAMB1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 CorA F5_F8_type_C Motif Other DBs NCBI-GeneID:  130027340 NCBI-ProteinID:  XP_055973999 LinkDB All DBs Position Unknown AA seq 1788 aa AA seqDB search MDLGLPQVLVCCFLALCGARARAQEPEFSYGCAEGSCYPATGDLLIGRSHKLSVTSTCGL QKPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGV ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGTTWRVYRYFAYDCESSFPGIS TGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFV KLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVHGFDEEVEGMVHGHC MCRHNTKGLNCEQCMDFYHDLPWRPAEGRNSHACKKCNCNEHSSSCHFDIAVYLATGNVS GGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNLCEKCTCDPAGSQNEGICDSYTDFS VGLIAGQCRCKLYVEGEHCDVCKEGFYGLSAEDPYGCKSCACNPLGTIPGRNPCDSETGH CYCKRLVTGQRCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSPESGQCSCRPHMIGR QCNEVEPGYYFINLDHYIYEAEEGTFGPGVSIVERQYIEDRIPSWTGAGFVRVPEGAYLE FFIDNIPYSMEYEILIRYEPQLPDKWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLS PGSRYVVLPRPVCFEKGVNYTVRLELPQYTSYDSDVESPYTLIDSLVLMPFCQSLDIFTV GTSGDAVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQ GSLSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCRPCECDLQGSVNAFCDSVTG QCHCFQGVYTRQCDRCLPGYWGFPSCQPCQCNGHAEDCDSVTGQCLGCQDYTAGHNCERC LPGYYGDPIIGSGDHCRPCPCPDGPESGRQFANSCYQDPITLQLECVCNPGYIGTRCEDC ASGYFGNPSEVGGTCQPCRCHHNIDMTDPGACDRETGRCLKCLYHTEGEHCQHCRLGYYG DALRQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLSNVIGQNCDRCAPNTWQLASG SGCEPCSCDAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPNVECRACDCDARG IETPQCDQSTGQCVCIEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIISELTNRTQ KFLEKAKALKISGVIGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGALFEEAEKLTK DVTERMTEVEVKLSDTASQGNSTARELDALQREAESLDSTIKELSEQLEFIKNSDIRGAL DSITKYFQMSLDAEQRVNASTTDPGSTVEQSALTRDQVEDLMLERESQFREKQEEQARLL DELAGKLQSLDLSAAAELTCGTPPGASCSETECGGPNCRTDEGEKKCGGPGCGGLVTVAH NAWQKAMDFDQEVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDRSNE DLRNLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPEQLQNLTDDIRERVESLSQVE VILQQSAADIARAETLLGEAKKASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADE DIQGTQNVLTSIESETAASEETLLNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYT VKQSADDAKKSLDGELDEKYKKAEDLIAKKSEESADARRKAEMLQNEAKTLLAQANSKLQ LLQDLEKKYEDNQKYLEDKAQELVRLEGEVRTLLKDISQKVAVYSTCL NT seq 5367 nt NT seq  +upstreamnt  +downstreamnt atggacctggggctgccgcaggtgttggtttgctgtttcttagcgctctgcggggctaga gcgagagctcaggaacccgagttcagctacggctgtgcggagggcagctgctacccggcc accggcgaccttctcatcggccgatcgcacaagctgtcggtgacctcgacgtgcgggctt cagaagcccgagccctactgtatcgtcagccacctccaggaggacaaaaaatgcttcata tgcaattcacaagatccttatcatgaaacactcaatcctgacagtcatctcattgaaaat gtggtcactacatttgctccaaaccgcctgaagatttggtggcagtctgaaaatggtgtg gagaatgtaacgatccaactggatttggaagcagagtttcattttactcatctcataatg accttcaagacattccgtccagctgctatgctgattgaaagatcatccgactttgggacc acctggcgtgtgtacagatattttgcctatgactgtgagagctcatttccaggcatttca accggtcctatgaaaaaagttgatgatataatttgtgactcccgatactctgacattgag ccctcaacagaaggagaggtgatatttcgtgctttagatcctgccttcaaaattgaagat ccttacagtccaaggatacagaatctcctgaaaattaccaacctgagaatcaagtttgtg aaactgcatactttgggagacaaccttttggattccagaatggaaatcagagagaagtac tattatgcggtttatgatatggtagtgcgaggaaattgcttctgctatggccatgctagt gagtgcgcccctgtgcatggattcgatgaagaagtcgaaggaatggtccatggacattgc atgtgtaggcataataccaagggcttgaactgtgaacagtgtatggatttttaccatgat ttaccctggagacctgctgaaggccgaaacagtcatgcctgcaaaaagtgtaactgcaat gaacattccagctcatgccactttgacatagcagtttacttggctactggaaacgtcagt ggaggagtatgtgacgattgtcagcacaacacaatgggacgcaactgtgagcagtgcaaa cccttttactatcagcacccagagagagatgtccgcgatccaaatctctgtgaaaaatgt acatgtgatccagctggttctcagaatgaaggaatttgtgacagttacacagatttttct gttggtctcattgctggccagtgtcgctgtaaattatacgtggaaggagaacattgtgat gtttgcaaagaaggcttttatggtttaagtgctgaagacccatatggttgtaaatcttgt gcttgcaatcctctgggaacaattcctggtaggaatccttgtgattcggagactggccac tgctattgtaagcgtctggtgacaggacagcgttgtgaccagtgtctgccagagcattgg ggcttaagcaatgatttggatggatgtcgaccttgtgactgtgaccttgggggagccttg aacaatagctgctcgcctgagtccggccagtgctcctgccgaccccacatgatcgggcgt cagtgcaatgaagtggaacctggttactattttatcaacttggaccactacatctatgaa gccgaggaaggcacctttggacctggtgtcagcatagtggagcgacaatatatcgaggac cggattccttcctggactggagcaggctttgttcgagtacctgaaggagcctatttggag tttttcattgacaacataccatattctatggagtatgagattctgattcgctatgagcca cagcttcccgacaagtgggagaaagctgtcatcacagtgcagcgacctggaaagattcca accagcagccgatgtggtaatactgtccccgatgatgacaaccaggtggtgtccctctca cctggctctaggtatgtggtcctgcctcgccccgtatgctttgagaaaggtgtgaactac acagtgaggctagagctgccccaatacacctcctacgacagcgatgtggaaagcccctat acgctgatagactcacttgttctcatgccattctgccaatcgctggatatctttacggtg ggaacttcgggagatgcggtagtcaccaacagtgcctgggagaccttccagagataccga tgtctggagaacagcagaagtgtggtgaaaacaccaatgacagacgtttgcagaaacatc atctttagcatttctgccctcttacaccaaacaggcctggcctgtgaatgcgaccctcag ggctccttaagttccgtctgtgaccccaacggaggccagtgccagtgccggcccaacgtg gtgggaagaacctgcgacagatgtgctcccggcacttttggtttcggccccagtggatgc agaccttgtgaatgcgacctacaaggatctgtcaatgccttctgtgattccgtcactggc cagtgccactgtttccagggcgtgtacacacgacagtgcgaccggtgtttacccggctac tggggctttccaagctgccagccctgccagtgcaatggccatgctgaggactgcgactct gtgacggggcagtgcttgggctgccaggactacaccgcagggcataactgtgaaaggtgc ctgcctggttattatggtgatcccatcattggatctggagatcactgccgaccttgtcct tgcccagatggtcctgagagtggacgccagtttgccaatagctgttatcaagatcccatt actctccagcttgagtgtgtctgtaatccaggatacattggcacccgatgtgaggattgt gcctctggctactttggcaacccctcggaggtgggtggtacgtgccagccctgccgctgt caccacaacattgacatgacagaccctggagcctgtgaccgagagacagggcgttgcctc aagtgcctgtaccacacggaaggggagcactgccagcactgccgcctgggctactatgga gacgccctccgccaggactgtcgaaagtgtgtctgtaactacctgggcaccgtgcaggag cattgcaacggctccgactgccagtgtgacaagaccactgggcagtgcttgtgcctttcc aatgtcatcgggcagaactgtgaccgttgtgcacccaacacatggcagctggccagtggg agtggctgtgaaccctgtagctgcgatgctgctcattccttcgggccatcttgtaacgag ttcacaggacagtgccagtgcatgcctggctttggaggccggacctgcagcgagtgccag gaactcttctggggagaccccaacgtggagtgccgagcctgtgactgtgatgccaggggc attgagacgccacagtgtgaccaatccacgggccagtgtgtctgcattgagggtgtcgag ggcccgcgctgtgacaaatgcactcgtgggtactcgggcgtctttccagactgcacgccc tgccaccagtgctttgctctgtgggacgtgatcatcagtgagttgaccaacaggacccag aagtttctggagaaagcgaaggccctgaagatcagcggagtcattgggccttaccgagag acggtggactcagtggagaagaaagtcaatgagatcaaagacatcctggcccagagtccc gctgcagagccgctgaagaacattggggctctgtttgaggaagcagagaaattaaccaaa gatgttactgaaaggatgactgaagtagaagtgaaattatctgacacagcttcacaaggc aacagcacagccagagaactagatgctttacagagagaagcagaaagcttggacagcaca ataaaggagctttctgagcaattggaatttatcaaaaactcagatatccggggggcccta gacagcatcaccaagtatttccagatgtctctggatgccgagcagcgggtgaatgcctcc accacggaccccggcagcactgtggagcagtcggctctcactcgcgaccaggtggaagac ttgatgttggaacgagagtcccagttccgggagaagcaagaggaacaggcccgccttctg gatgaactggcaggcaaactgcagagtctcgacctttcggctgccgcagaactgacttgt ggaacgcctccaggagcctcctgctctgagacggaatgcggcggtccaaactgcagaacc gatgaaggagagaagaaatgcggagggcccggctgtggtggtctcgtcactgtcgcacac aatgcctggcaaaaagccatggactttgaccaagaagtcctgagtgccctggctgaagtg gagcagctctccaagatggtctctgaagcaaaacttagggcagatgaagcaaaacagaat gcacaagatgttctgttgaaaaccaatgctaccaaagaaaaagtggataggagcaatgag gatctgagaaatctgatcaagcaaatcagaaattttttgactgaggacagtgctgatctg gacagcattgaagcagttgctaatgaagtattgaaaatggaaatgcctagcaccccggag cagttacagaacctgacagacgacatccgtgaaagagtggaaagcctgtctcaagtcgag gttattctacagcaaagtgcagctgacatcgccagagcggaaacattgttaggagaagct aaaaaagccagcaaaagtgcaacagatgttaaggtcactgcagacatggtgaaggaagct ctggaagaggcagaaaaggcccagattgcagcagagaaggcaattaaacaagcagatgag gacatccagggaacgcagaacgtgctaacttcgatcgaatcagaaactgcagcatctgaa gaaacgctgttaaatgcctcccagcgcatcagcgagctagagagaaatgtggaagaactt aagcggaaggctgctcagaactctggggaggcagaatatattgaaaaagtagtatatact gtgaagcaaagtgcagatgatgcgaagaagtctctggacggtgaacttgatgaaaagtat aagaaagcagaagatttaattgccaaaaaatcagaagagtcggctgatgccagaaggaag gctgaaatgctgcagaatgaagcaaagactcttctggctcaagcaaacagcaagctacaa ctgctgcaagatttagaaaaaaaatacgaggacaatcaaaaatatttagaagataaagct caagaattagtaagattggaaggagaagttcgcacactcctgaaggatataagccagaaa gtcgccgtttacagcacctgcttataa

DBGET integrated database retrieval system