Sorex fumeus (smoky shrew): 130027382
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Entry
130027382 CDS
T10594
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130027382 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130027382 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130027382 (GARS1)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130027382 (GARS1)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
130027382 (GARS1)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130027382 (GARS1)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130027382 (GARS1)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130027382 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
130027382
NCBI-ProteinID:
XP_055974083
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MPCPRPALLRAARAALLPPPSPRALRTAAPAPRSMDGAEAALAPLRLAVRQQGDLVRKLK
EDKAPQVDVDRAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYG
GVSGLYDFGPVGCALKNNIIQNWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFM
VKDMKNGECFRADHLLKAHLQKLMADKKCSAEKKAEMESVLTQLDNYGQQELGDLFVNYN
VKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFA
AAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNEKDHPKFQSVADLQLNLYSAKAQV
SGQSAQKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGVSPEKLRFRQHMENEMAHYAC
DCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPISVNVVQFEPNKG
AVGRAYKKDAKLVMEYLAACEECYITEMEKLLDEKGEFTIETEGKTFQLTRDMVSVKRFS
KTLHVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLS
QNQEFMPFVRELSDALTRNGVSHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPH
TATLRDRDSMRQIRAEVSELPGMVRDLANGTLTWADVEARYPLFEGQETGKKETLEE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcccgcggcccgcgctgctccgcgccgcccgcgccgcgctgctgcccccgccg
tccccgcgcgcgctccgcacggccgcccccgcgccccgcagcatggacggcgccgaggcc
gcgctcgccccgctccggctcgccgtgcgccagcagggagatctcgtgcggaagctgaag
gaagataaagccccccaggtggatgtcgaccgagccgtggctgagctcaaagcccggaag
agggtgctggaggcgaaggaattagcattacagcccaaagatgacattgtggacagagcc
aaaatggaagataccctcaagaggagatttttctacgatcaagcttttgccatttatgga
ggtgtcagtggcctgtacgactttgggcccgttggctgtgctttgaagaacaacatcatt
cagaattggaggcagcactttatccaagaggaacagattctcgagattgattgcaccatg
ctgactcctgagccagttttaaagacctcaggccacgtagacaaatttgctgatttcatg
gtaaaagacatgaagaatggagagtgttttcgtgctgaccatctgttgaaagctcattta
cagaagctgatggctgataagaagtgttcggctgagaagaaagcagagatggaaagtgtc
ttgacccagcttgataactatggacagcaagaacttggggatctttttgtgaactataat
gtgaaatcccccattactgggaatgacctctcccctccagtctcctttaacctgatgttc
aagaccttcatcgggcccggaggaaacatgccagggtacttgaggccagaaactgcacag
gggattttcctcaattttaagcgacttctggaattcaaccaaggaaagttaccttttgct
gctgcccagattggaaattcttttcgaaatgagatttcccctcgatctggactgatcagg
gtcagagaattcacaatggcagaaattgagcactttgtagaccccaatgagaaagaccat
cccaagttccagagtgtggcagacctccagctgaatttgtattctgcgaaggctcaggtc
agcggacagtctgctcagaaaatgcgcttaggggatgctgttgaacagggtgtgattaat
aactcagtattaggctactttattggccgcatctacctctacctcacgaaggttggagta
tctccagaaaaactccgcttccggcagcacatggagaacgagatggcccactatgcatgc
gactgctgggacgccgagtccaagacgtcctacggctggatcgagattgtcgggtgtgct
gatcgttcctgttacgacctctcttgtcatgcacgagccaccaaagtcccacttgtcgct
gagaaacctctgaaagagcccatatcggtcaacgttgttcagtttgaacccaataagggc
gccgttggcagagcatataagaaggacgcaaagctggtgatggagtaccttgccgcgtgt
gaagagtgctacattacagagatggagaaacttcttgatgagaaaggtgaattcaccatt
gaaactgaagggaaaacgtttcagttaacccgagacatggtcagtgtgaagagattctcg
aaaacattacatgtggaagaagtcgtcccaaatgtcatcgagccctccttcggcctgggc
aggatcatgtacacggtgtttgagcacactttccacgtccgagagggggatgagcagaga
acgttcttcagtttcccggccgtcgtagctccattcaaatgctctgtccttccactgagt
cagaaccaggagttcatgcccttcgtccgggaactgtccgacgccctcaccaggaacggc
gtctcccacaaagtcgacgactcctcggggtccatcgggagacgctacgccaggacggat
gagatcggggtggccttcggcatcaccatcgactttgacaccgtgaacaagacccctcac
accgccaccctgcgcgaccgggactccatgcggcagatcagagccgaggtctcggagctg
ccgggcatggtccgagacctggccaacggcaccctcacgtgggctgacgtggaggccagg
tacccgctcttcgaagggcaggagactgggaagaaggaaaccctggaagagtga
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