Sorex fumeus (smoky shrew): 130027522
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Entry
130027522 CDS
T10594
Symbol
MINDY4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130027522 (MINDY4)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130027522 (MINDY4)
Ubiquitin system [BR:
sfum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
130027522 (MINDY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
130027522
NCBI-ProteinID:
XP_055974330
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MDSLFVEEVAASLVREFLSRKGLKKTCWTMDQERPRSDLSINSRNDLRKVLHLEFLYKEN
KAKENPLKTNLELITRYFLDHCGNTTNNFTQETPIPALSMPKKSTKLPLRCSETTLVNIY
DLADEDASWRSSLSETSKVRHDNHDGDVLGNFVSSKRPPHKNKPVQIVPGETSPLAPVWE
KTDKLPPSEPSLDTKKMAEKIRPRTGLIVRGMMSRPTANCPQDPSRKHSLKRSPTTTVKS
MSQPGPHAQEEESRKVTELSTCTPAGPSPEEGLALNNGFVAQSSLPSDRPRPSSPPPLSS
KGLPPRGRGQQREAAVDSGLGADRMPLKLYLPGGNARATQERLERAFKRQGSQPTPIRKN
LSPPSSKAGGELDTLELEDVEDELIEEEVIRCPVPSVLQLQTASRPIDLSVAKDIKNVLF
GSSFCCFNEEWKLQNFTFSEAASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGEGRANG
VRSLQPSSAQRTRCLALALADIVWRAGGHQRAVLALTSGTQQFSPTGKYKADGVLETLSL
HSLTSYDELLRFLHHCVPQFEAGPYGCILLTVSAILSRTTELICQDFDVPSNHLIGAHGY
CTQELVNLLLTGRAVSNVFNDVMELDSGDGSVTLLKGIAARSNIGFLSLFEHYNVCQVGC
FLKTPRFPIWVVCAESHFSVLFSLQPALLQDWRSERLFDLYYYDGLANQEEQIRLTVDTT
QTVPKDNGQDLTPPLELCIRTKWKGASVCWNGSDPIL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctcttcgtggaggaggtggccgcctccctggtgcgggagttcctcagcaga
aagggtttaaagaagacgtgctggaccatggaccaggagcgcccacgctccgacctcagc
atcaacagcagaaacgacctccgcaaggttttgcatcttgagttcctctacaaagagaac
aaggcaaaggaaaaccctctaaaaacaaaccttgaactcattaccagatactttttggat
cactgtggaaatactaccaacaacttcactcaagaaacaccaatccctgcgctctcgatg
ccaaagaaaagtaccaaattgccactgagatgctcagagaccacacttgtaaatatctat
gacttagcagatgaagatgccagctggagaagctcgttgtcagaaaccagcaaagtcaga
cacgacaatcatgatggggatgtacttggtaattttgtatcatccaaaaggcccccccac
aaaaataagcccgtccagattgtccctggtgagaccagccccttggccccggtgtgggag
aagacggacaagctcccaccatccgagccttccttggacaccaagaagatggcagagaag
atcaggcccaggactggcctgattgtgcgaggcatgatgtccaggcccaccgccaactgc
ccacaggatcccagccggaagcactctctgaagcggtccccaacgacgaccgtgaagagc
atgagccagcccgggccgcacgcccaggaggaggagagccggaaagtgactgaactgtcc
acctgcaccccagccggccccagccctgaggaaggtctggcactgaacaacggcttcgtg
gcccagagctcactgccctccgacaggccgagacccagcagccctcctcccctgtccagc
aaagggctgccccccaggggcaggggccagcagagagaggcggctgtggacagtggcctg
ggagctgacaggatgcctctgaagctctacttgccaggtgggaacgccagggcgacccag
gagaggctggagagagccttcaaacggcaggggagccagccgacgcccatcaggaaaaac
ctgtcgccaccatccagtaaggctgggggagagctggacaccctggagctcgaggatgtg
gaggatgagctgatcgaggaggaggtcatccgctgccctgtcccatcggttctccagctg
cagacggcatctcggcccatcgacctctcagtggccaaggacatcaagaacgttctgttt
ggctccagcttctgctgtttcaatgaagaatggaagctccagaacttcaccttcagcgag
gcggcctccttaaagtacggcattgtgcagaacaaggggggtccctgcggggtcctggca
gcggtgcagggctgtgtcctgcagaagctcctgtttgagggcgagggcagagccaacggc
gtgcggtcgctgcagccttctagtgcccaaaggacacgctgcctggccctggccctggcc
gacattgtgtggcgggctggtggtcaccagagagccgtgctcgcactgacgtcgggaaca
cagcagttcagtccaacggggaaatacaaagcagatggagtcttagaaacactcagcctg
cacagcctgacgagctacgacgagctgttgcgttttctccaccactgcgtgcctcagttt
gaagcaggcccctatggctgcatcctgctcactgtgtctgccatcctgtccaggaccacg
gagctcatctgccaggacttcgatgtccccagcaaccacctgatcggagcacatggctac
tgcacgcaggaacttgtcaatctgctcctgaccgggagggccgtgtccaatgttttcaat
gacgtgatggagctggattctggggatgggagcgtcactctcctcaaaggcatcgccgcg
cgcagcaacatcggcttcctgtccctcttcgagcactacaatgtgtgccaggtgggctgc
ttcctgaagaccccacgcttcccgatctgggtggtatgtgccgagagccacttcagcgtc
ctcttcagcctgcagccggcgctcctgcaagactggcgctctgagcggctcttcgacctc
tactactacgacggcctggccaaccaggaggagcagatccgactgaccgtggacaccacc
cagacagtgcctaaggacaacggccaggacctcaccccacccctggagctctgcatcagg
accaagtggaagggcgcctccgtgtgctggaatggctcggaccccatcctgtga
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