Sorex fumeus (smoky shrew): 130027537
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Entry
130027537 CDS
T10594
Symbol
GSDME
Name
(RefSeq) gasdermin-E
KO
K22146
gasdermin-E
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130027537 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130027537 (GSDME)
Transporters [BR:
sfum02000
]
Other transporters
Pores ion channels [TC:
1
]
130027537 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
130027537
NCBI-ProteinID:
XP_055974350
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MFAKATRNFLKEVDADGNLIAVSNLNDSDKLQLLSLVTKKRRFWCWQKPKYQFLSLTLGD
VLTEDQFMNPVVVESDFVKYEGKFENHVSGSIETALGRVKLNVGGKGLVESQSSFGTLRK
QEVDLQQLIREAVDRTINLKNPVLQQVLERPEEVLCVLTQKIMTTQKCVISEHVQIEERC
GGMVGIQTKTLQVSASEDGNLVKDSNVVLEIPAAATIAYGVIELYVKQDGQFEFCLLQGK
SGGFELEQKSRYASMDPLPFREFHFGDMPDGTQEPLRVLKQAARLLEEDFQPFTELPTQQ
QTALHDVLQTVLFDDELLLVLEQVCDDLVRGLSPQAVLGKLPPPQQEAATAFLQLVGCHM
QGSVAEDEASTPKLLSTAYFLLSALAEMPDNASALLGTCCTLQIIPTLCHLLRALSEDGV
SDLGDPVLVPLQDAERFGIVQRLFAYANIHLERLQTSVKASSHQDPHVFPLILCISLNGL
RALGRAHE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagcaacaaggaattttctcaaagaagttgatgctgatggtaacctgatt
gcggtatccaacttgaatgattcagataaattacagcttctaagtctggtgaccaaaaag
agaagattctggtgctggcagaaacccaaataccagtttctgtctctcacactaggagat
gtgcttacagaagaccagtttatgaatccagtggtcgtggagtcggactttgtgaagtat
gaaggcaagtttgagaaccacgtgagcgggtccattgagacggccctggggagagtgaag
ctgaacgtgggcggcaaaggcctggtggaaagtcagtcttcgttcgggaccctcaggaag
caggaggtggacttgcagcagctcatccgggaggccgtggacaggacaataaacctgaaa
aaccccgttttgcagcaggtgctggagaggcccgaggaggtgctgtgtgtcctgactcag
aagatcatgacaacgcagaaatgtgtgatctcggagcacgtacagattgaagagcgctgt
ggtggcatggtggggatacagaccaagactctgcaggtgtcagcctctgaggacggcaac
ttggtcaaggactcaaacgtggtgctggagatcccggctgctgccaccatcgcctacggc
gtcattgagttatatgtgaaacaggacgggcagttcgagttctgcctcctgcaagggaag
agcggcggcttcgagctggagcagaagagccgctacgcatccatggacccgctgcccttc
cgcgagttccacttcggggacatgcccgatggcacacaggagcccttgagggttctaaag
caagccgcccgcctcctggaggaggatttccagcccttcacggagctgccgacccagcag
cagacagctctgcacgatgtgctccagaccgtcttgttcgacgatgagttacttctggtc
ctggagcaagtgtgtgacgacctggtgaggggcttgtcaccccaggccgtgctggggaag
ctgccgccaccacagcaggaggctgccaccgccttcttgcagctggtggggtgccacatg
cagggatctgtagccgaggatgaggccagcaccccgaagctgctgtccaccgcctacttc
ctcctcagtgccctggcagaaatgccagataatgcttcagctctgctgggtacttgctgt
acactccagatcattcctacgctgtgccacttgctccgggctctgtctgaggatggggtg
tcagacctcggggacccagtcttggtgcctctgcaggatgcagaaagatttgggatcgtg
cagcggctgtttgcctacgccaacattcacctggagaggttgcagacatctgtgaaagcc
agcagccatcaggaccctcatgtgttcccactaattctctgtatcagcttgaatgggctc
cgtgctttgggacgagctcatgagtaa
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integrated database retrieval system