Sorex fumeus (smoky shrew): 130027547
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Entry
130027547 CDS
T10594
Symbol
SND1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
130027547 (SND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
130027547
NCBI-ProteinID:
XP_055974360
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MASTQSGGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLAR
RAAVAQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGE
NIAESLVAEGLAARREGMRANNPEQNRLSECEEQAKAAKKGMWSEGSGAHTIRDLKYTIE
NPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDNYLVTVMLSGIKCPTFRREADGSETP
EPFAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWSI
AVYTRGAEKLRAAERFAKERRLRIWRDYVPPTANLDQKDKQFVAKVMQVLNADAIVVKLN
SGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDY
IRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLA
AEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLK
LYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEAMLFTKELVLQREVEVEVESM
DKAGNFIGWLHIDGANLSVLLVEQALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAHY
EEQPVEDLVPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRTDIASH
PPVEGSYTPRRGEFCIAKFVDGEWYRARVEKVESPAKVHVFYIDYGNREILPSTRLGTLP
PAFSTRVLPAQATEYAFAFIQVPQDEDARTDAVDSVVRDIQNTQCLLNVEHLTAGCPHVT
LQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRAD
DADEFGYSR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacgcagagcggcggctcctccgggggacccgcggtgcccaccgtgcagcgg
ggcatcgtcaagatggtcctctctggatgtgccatcattgtccgaggccagcctcgtggc
gggccccctcccgagaggcagatcaacctcagcaacattcgagcaggaaacctggcccgc
cgcgctgcagtggcacagcctgatgccaaggatactccggatgagccctgggcattccca
gctcgagagttcctccgaaagaagctgattgggaaggaggtctgtttcacgatagagaac
aagaccccccaggggcgagaatatggcatgatctaccttggcaaagataccaatggggaa
aacatcgctgagtctctggttgcagaaggcctggctgcccggagagaagggatgcgggcg
aacaatcctgagcaaaaccggctttcagaatgtgaggagcaagcgaaggcagccaagaaa
ggcatgtggagtgaggggtccggcgctcacaccatccgggacctcaagtacaccattgag
aaccccaggcactttgtggactcccaccaccagaagcctgtcaatgccatcatcgagcat
gtgcgggacggcagtgtggtcagggctctgctccttccagataactacttggttaccgtc
atgctgtccgggatcaagtgcccgactttccgacgggaagctgatggcagtgaaacacca
gagccctttgcagcagaagccaaatttttcacggagtctcgactgctacagagagatgtt
cagatcatcttggagagctgccacaaccagaacattctgggtaccatccttcatccaaat
ggcaacatcaccgagctcctcctcaaggaaggttttgcacgctgcgtggattggtcgatc
gcggtgtatactcggggcgcagaaaagctgagggcggctgagaggtttgccaaggagcgc
aggctgcgaatctggagagactatgtgcctcccactgctaacttggaccagaaggacaag
cagtttgttgccaaggtgatgcaggtgctgaatgctgatgccattgtcgtgaagctgaac
tctggcgactacaagaccatccacctgtccagtatccgacccccacggctggagggcgag
aacacccaggataagaacaagaaactacgtcctctgtatgacattccctacatgttcgaa
gcccgggaatttcttcgaaagaagctgatcgggaaaaaggtcaatgtgactgtggactac
attagaccagccagccctgccaccgagaccgtgcctgccttctcagagcggacctgtgcc
actgtgaccattggaggcataaacattgctgaggccctggtgagcaaaggtttggccaca
gtgatccgctaccggcaggacgacgatcagcggtcttcccactatgatgagctgcttgcc
gccgaggccagagctattaagaatggcaagggattgcatagcaagaaggaagtgcctatc
caccgcgtggcagacatctcgggggatactcaaaaagcaaagcagttcctgcccttcctc
cagcgggcaggccgctctgaagctgtggtggagtacgtcttcagtggttctcgcctcaaa
ctgtatttgccaaaggaaacttgccttatcaccttcttgcttgcaggcattgaatgtccc
cgcggtgcccggaacctccccggcctggtgcaggagggtgagcctttcagtgaggaagcg
atgcttttcaccaaggagctggtgctgcaacgtgaggtggaggtggaggtggagagcatg
gacaaggcgggcaacttcatcggctggctgcacatcgacggcgccaacctgtcagtgctg
ctggtggagcaggcgctgtccaaggtgcacttcaccgccgagcgcagttcctactacaag
tccctgctgtccgctgaggaggccgccaagcagaagaaggaaaaggtctgggcccactac
gaggagcagcccgtggaggacctggtgcccgtgctggaggagaaggagcgctcggccagc
tacaagcccgtgttcgtgaccgagatcaccgacgacctccatttctacgtgcaggacgtg
gagacgggcacacagctggagaagctgatggagaacatgcgcactgacatcgccagccac
ccccctgtcgagggctcatacaccccccgccggggcgagttctgcatcgccaagtttgtg
gacggagaatggtaccgcgccagagtggagaaggtggagtcccccgccaaagtgcacgtc
ttctacatcgactacggcaacagagagatcctgccgtccacccgcctgggcaccctgccc
cctgccttcagcacgcgggtgctgcccgcacaagccacggagtacgccttcgccttcatc
caggtgccccaagatgaggacgcccggacggatgccgtagacagcgtggtacgggacatc
cagaacacgcagtgcctgctcaacgtggagcacctcaccgccggctgcccccacgtcacc
ctccagttcgccgactccaagggcgacgtggggctgggcctggtcaaggaggggctggtc
atggtggaggtgcgcaaggagaagcagttccagaaagtgatcacagagtatctgaacgcc
caagagtcggctaagagtgcccggctgaacctgtggcgctacggagatttccgggccgac
gacgccgacgagtttggctacagccgctaa
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