Sorex fumeus (smoky shrew): 130027566
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Entry
130027566 CDS
T10594
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit SEM1
KO
K10881
26 proteasome complex subunit DSS1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum03440
Homologous recombination
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130027566 (SEM1)
09124 Replication and repair
03440 Homologous recombination
130027566 (SEM1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130027566 (SEM1)
09164 Neurodegenerative disease
05010 Alzheimer disease
130027566 (SEM1)
05012 Parkinson disease
130027566 (SEM1)
05014 Amyotrophic lateral sclerosis
130027566 (SEM1)
05016 Huntington disease
130027566 (SEM1)
05017 Spinocerebellar ataxia
130027566 (SEM1)
05020 Prion disease
130027566 (SEM1)
05022 Pathways of neurodegeneration - multiple diseases
130027566 (SEM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130027566 (SEM1)
04131 Membrane trafficking [BR:
sfum04131
]
130027566 (SEM1)
03051 Proteasome [BR:
sfum03051
]
130027566 (SEM1)
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130027566 (SEM1)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
130027566 (SEM1)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
130027566 (SEM1)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
130027566 (SEM1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130027566 (SEM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
130027566
NCBI-ProteinID:
XP_055974382
LinkDB
All DBs
Position
Unknown
AA seq
70 aa
AA seq
DB search
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaaagcagcccgtagacttgggtctcctggaggaggatgacgagttcgag
gagttccccgcggaagactgggctggtttagatgaagacgaagatgcacatgtctgggag
gataattgggatgatgacaatgtagaggatgacttttccaaccagttacgtgctgaatta
gaaaaacatggttataagatggaaacttcataa
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integrated database retrieval system
