Sorex fumeus (smoky shrew): 130027570
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Entry
130027570 CDS
T10594
Symbol
HOXA2
Name
(RefSeq) homeobox protein Hox-A2
KO
K09302
homeobox protein HoxA/B2
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130027570 (HOXA2)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130027570 (HOXA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
IFT52_central
Rib_recp_KP_reg
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
130027570
NCBI-ProteinID:
XP_055974393
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All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLN
PASHARHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPASAAAAAAA
TGPACLSHKESLDIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLD
LTERQVKVWFQNRRMKHKRQTQCKENQNGEGKLKGLEDSEKVEEDEEEKSLFEQALSVSG
ALLEREGYTFQQNALSQQQAPNGHNGDSQSFPVSPLTSNEKNLKHFQHQSPTVPNCLSTM
GQNCGSGLNNDSPEALEVPSLQDFNVFSTDSCLQLSDAVSPSLPGSLDSPVDISADSFDF
FTDTLTTIDLQHLNY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaatttgagcgagagattggttttatcaatagccagccgtcgctcgccgag
tgtctgacatcttttccccctgtcgctgatacatttcaaagttcatcaatcaagacctcg
acgctttcacactcgacactgattcctcctccttttgagcagaccattcccagcctgaac
ccggccagtcacgctcgccacggcgctggcggccgccccaagccgagccccgcgggcagc
cgcggcagccccgtgcccgccggcgccctgcagccgcccgagtacccctggatgaaggag
aagaaggcggccaagaaaaccgcgctgcctcccgcctcggccgccgccgccgccgccgcc
accggccctgcctgcctcagccacaaagaatccctggacatcgcggacggcagcggcggg
ggttcccggcgcctgcgaactgcttacaccaacacgcagctcttagagctggaaaaggaa
tttcatttcaacaagtacctctgcaggccccggagggtggaaatcgctgcgctgctggat
ttgacggagagacaagtgaaagtgtggtttcagaaccggaggatgaagcacaagaggcag
acccagtgcaaggagaaccaaaacggcgaggggaaactgaaaggcctggaggactcagag
aaagtggaggaggacgaggaggagaagtcgctcttcgagcaagccctcagcgtctccggg
gcccttctggagagagaagggtacacttttcagcaaaatgccctctcgcagcagcaggct
cccaacggacacaatggcgactcccaaagtttcccagtttcgcctttaaccagcaatgag
aaaaatctgaaacattttcagcaccagtcacccactgttcctaactgcttgtcaacaatg
ggccagaactgtggctcgggcctaaacaatgacagtcccgaggccctcgaggtcccctct
ttgcaggacttcaacgtcttttccacagattcctgcctgcagctttcagatgcagtctcg
cccagtttaccagggtccctcgacagtcccgtagatatttcagctgacagctttgacttt
tttacagacacactcaccacaatcgacttgcagcatctgaactactaa
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