Sorex fumeus (smoky shrew): 130027592
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Entry
130027592 CDS
T10594
Symbol
HOXA10
Name
(RefSeq) homeobox protein Hox-A10
KO
K17443
homrobox protein Hox-A10
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
130027592 (HOXA10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130027592 (HOXA10)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130027592 (HOXA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130027592
NCBI-ProteinID:
XP_055974413
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MSARKGYLLPSPNYPTTMSCSESPAANSFLVDALISSGRGEAGGGGGGGGGGGGGAGGGG
GGGGYYGHGGVYLPPAADLPYGLQSCGLFPALGGKRNEAASPGGAGGGGGLGPGAHGYAP
APVDLWLDAPRSCRMEPPEGPPPPPPPPPQPPPPATACSFAQNIKEESSYCLYDSADKCP
KASAAAAAAELAPFPRGPPPDGCALGSSGGVPVPGYFRLSQAYGTAKGYGGGGGGGGGGG
GGGAQQLGAGPFPAQPPGRGFDPPPALATGSADAARKERVLDSPPPPTLPCAGGSGGSQG
DEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGENAANWLTAKSGRKKRCPYTKHQT
LELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTANFN
FS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagaaagggctatctgctcccttcgccaaattatcccacaacaatgtcatgc
tcggagagccccgccgcgaactcttttttggtcgacgcgctcatcagctccggcagaggc
gaggccggcggtggtggcggcggcggcggcggcggcggtggcggcgcggggggcggcggc
ggcggcggcggctactacgggcacggcggggtctacctgccgccggccgccgacctgccc
tacgggctgcagagctgcgggctcttcccggcgctgggcggcaagcgcaatgaggcggcg
tcgccggggggcgcgggcggcggcgggggcctgggccccggggctcacggctacgcgccc
gcgcccgtagacctgtggctggacgcgccccgctcgtgccgcatggagccgcccgaaggg
ccgccgccgccgccgcccccgccgccgcagcccccgccgccggccaccgcgtgctccttc
gcgcagaacatcaaagaggagagctcctactgcctgtacgactcggcggacaaatgcccc
aaagcctcggccgccgcagccgccgccgagctggcccccttcccgcggggcccgccgccc
gacggctgcgccctgggcagctccggcggggtgcccgtgcccggttacttccgcctctcg
caggcctacggcacggccaagggctacggcggcggcggcggcggtggcggtggcggtggc
ggcggcggcgcgcagcagctcggcgccggcccgttccccgcgcagcccccgggacgcggc
ttcgacccgccgcccgcgctcgccaccggctcggccgacgccgcccgcaaggagcgagtc
ctcgattcgccgccgccccccacgctgccgtgcgccgggggcagcggcggctcccagggc
gacgaggaggcgcacgcgtcgtcctcggcggccgaggagctgtccccggccccttctgag
agcagcaaagcctcgcccgagaaggactccctgggcaattccaaaggcgaaaacgcagcc
aactggctcacggcaaagagcggccggaagaagcgctgcccctacaccaagcaccagacg
ctggagctggagaaggagtttctgttcaacatgtaccttactcgcgagcggcgcctagag
atcagccgcagcgtccacctcacggacagacaagtgaaaatctggtttcagaatcggagg
atgaaactgaagaaaatgaaccgagagaatcggatccgggagcttacagccaactttaat
ttttcctga
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