Sorex fumeus (smoky shrew): 130027699
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Entry
130027699 CDS
T10594
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04151
PI3K-Akt signaling pathway
sfum04510
Focal adhesion
sfum04512
ECM-receptor interaction
sfum05145
Toxoplasmosis
sfum05146
Amoebiasis
sfum05165
Human papillomavirus infection
sfum05200
Pathways in cancer
sfum05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
130027699 (LAMB4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130027699 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130027699 (LAMB4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130027699 (LAMB4)
09162 Cancer: specific types
05222 Small cell lung cancer
130027699 (LAMB4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
130027699 (LAMB4)
09174 Infectious disease: parasitic
05146 Amoebiasis
130027699 (LAMB4)
05145 Toxoplasmosis
130027699 (LAMB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
Motif
Other DBs
NCBI-GeneID:
130027699
NCBI-ProteinID:
XP_055974528
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MQFQLTILLHLGLLSYTKDQEECNMGACRPPTGNLLVGRGDQLSASSTCGLSGVQKYCIL
SYLEGEQKCFICDSRFPYDPYTQPNSHTIENVITSFEPDRENKWWQSENGLDHVSVRLDL
EALFQFSHLILKFKTFRPAAMLVERSTDYGHSWKVFKYFAKNCAASFPNISSGQAQEVGD
LVCDSKYSDIEPSTGGEVVLKALDPRFHIENPYSPYIQDLMTLTNLRINFTKLHTLGDTL
LGRRHNDSFDNYYYAVSEMVVRGSCFCHGHASECGPRQMVRGDVFSPPGMVHGQCVCQHN
TDGPNCERCKDFFQDAPWQPAAGLRDSTCRACRCNHHAQRCHFDRSRYVASGGLSGGVCE
DCQHHTEGPHCERCRPLFYRNPSRPLSDPYTCLPCECDPDGTISGGICVSHSDPALGTVA
GQCLCKEHVEGAKCDRCKPHYYGLSATDSLGCQPCNCHSWGSLPLSTCDADTGQCLCQPF
ATGPRCEECIVGYWGLENHLRACSPCGCDVGGAYSNACSPQTGQCECRPDITGRTCTKPA
PGYFFAPLTFYLYEAEEAMPLQQLAPLDSVASEQVSAVHVIFREPIPGTPVTWTGPGFAK
VLPGTGLRFVINNIPFPMDFAIAIRYEAQTSANWAAQIMVTPSEERKHCSHKTPQGKSSL
FTLPTTSRVMLLPTTICLEPDVQYSIDVYFSQSLEGGSHAHSHILVDSLGLIPQISSLEN
SFSKQDLEEYQLHNCMEIASEIGSQVLPGVCERLIVSLSALLHNGALACNCHPQGSLGPH
CSQLGGQCQCQPRVTGRSCDRCSPGSYKLGHQGCLECHCHPQGSKSTVCDQITGQCSCHR
EVTGHHCDQCLAGYFGFPNCRPCLCNGFAELCDPETGFCINCKGLTAGRNCERCIEGYHG
NPSAGQSCRPCQCPGVPSSNQYFAHSCYQNPWSTDVICNCHQGYTGAQCEECAAGFYGNP
RTGGAPCQPCACNNNIDVTDAGSCNQVTGECLRCLHNTQGPNCQFCKPGYFGSAFNQTCK
RCSCYPLGVNPAECPPDLEVCLCDPDTGSCACLPNVTGQNCDHCADGYWNLIPSRGCQPC
DCDPRTSHSSQCDQFTGQCPCKSGYGGKHCRECKKNHYGGPLGQCIPCDCNREGTQEPIC
DQATGTCHCREGVSGQRCDHCARGHGQEFPACLRCHLCFDQWDHTISALSKAVQGLIKLA
ANMEDKREALSVCEADFKGLRKNMSEIEKILKYPVFSSGEFLKVKDYQDFLGKQIMQLSE
QLKTVYEFQDLKETIITMGNTANFLVEDIQKKIGLYSKSHNTSIMDSLENIKMHYQRSSS
AEKITKETFSDINNSKKTRTDLVTTLDTLFSKGNLSLETLKQIKLPDIQILSEKVIFTMS
NFPCKVCGDHLCVSSSCSGPICPGSLNLSRNAFQKAQDAESLIHNLNNQVQGLKTQIKNT
SKLAEVSQNNTLQLSEKLRNMKNQSESEEEKINLLIKKLKKIVLEENVPPEDIEKIANHV
LDTHLPITSQNLTHELDKIRKLTQLREDYKRDENKLKKAADEVPKILQKAKEAEEAANVL
LNLDNMLNDLQQVQIIQGQANSAITQLTAKITNIRKNVLQAENQTKETRRELDLEERQLD
LKDGLSQLQTKLQRNQEQTLLAKAQAESAQRQAGGLEEGYVELKNQYAALQHKTSATGLT
KETIEKVKRLKDAAEKLAEDTEDKIRRVTDLEKKIRDLNLSRQEKVDQLKQLEDQVIAIK
NEIVEQENKYAECYT
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcaactaaccattcttctgcaccttgggttactcagttacaccaaagatcaa
gaggaatgcaacatgggtgcctgccgtccccccactggcaacctcctagtgggccgtggt
gatcagctctcagcctcttccacttgcgggctcagtggagtccagaaatactgcatcctc
agctaccttgagggggaacaaaaatgcttcatctgtgattccagatttccatatgatcca
tacacccaacccaacagccacactattgagaatgtcatcactagtttcgagccagataga
gaaaataaatggtggcaatctgaaaatggtcttgatcatgtcagcgtcagactggaccta
gaagcattgtttcagttcagccaccttattctgaaatttaagactttccggccagctgcg
atgttagttgaacgttccacagactacggacatagctggaaagtgttcaagtattttgca
aaaaactgtgctgcttccttccccaatatctcatctggccaggcccaggaagtgggagac
cttgtttgtgactccaaatactcggatattgaaccctcaactggtggtgaggttgtttta
aaagcattggaccccagatttcacatagaaaacccttacagtccctacatacaagacctc
atgacattaacaaacctgaggataaactttaccaaactccacacccttggggatactttg
cttggaagaaggcataatgattcctttgacaactactactatgctgtgtctgagatggtg
gttcggggcagttgtttttgccatgggcatgccagtgagtgtgggcccaggcagatggtg
cgaggagatgttttcagtcctcctggaatggttcacggccagtgtgtctgtcagcacaat
acagatggcccgaactgtgagagatgcaaggacttcttccaggatgctccttggcagcca
gcagcaggcctccgggatagtacctgcagagcctgtcgctgtaaccaccacgcccagcgc
tgtcactttgacaggtcccggtacgtggcgagcggtggtctaagtgggggcgtgtgcgag
gactgccagcaccacaccgagggaccgcactgcgagcgctgcagacccctcttctacagg
aaccccagcaggcccctctccgacccttacacgtgccttccttgtgagtgcgaccctgat
gggaccatatcaggtggtatttgtgtgagccactcagatcctgccttggggactgtggcg
ggccagtgcctgtgtaaggagcacgtggaaggagccaagtgtgaccggtgcaagccacac
tactatggactgagcgccactgattccctgggctgtcagccctgcaactgccactcctgg
gggagcctgccactctccacctgtgatgcagacacaggccagtgtctatgccaaccgttt
gccactggaccgcgctgtgaagaatgcatcgttggatactggggactagaaaatcatctc
cgtgcttgttctccctgtggctgtgatgttggaggtgcttattctaatgcgtgctcaccc
cagactgggcagtgtgaatgccgcccagacatcactggccggacctgcacaaagccagcc
cctggctatttctttgctcctttgactttctatctctatgaggcagaggaagctatgcca
ctccagcaacttgcacctttggattccgtagcttctgaacaggtgtctgctgttcacgtt
attttccgagagcctattccagggacccctgtaacatggacaggccctgggtttgcgaag
gttctccctgggactggcctgagatttgtcatcaacaacattccctttcccatggatttt
gctattgccattcgctatgaagcacagacttcagccaactgggctgcccagatcatggta
accccctctgaggaaagaaagcactgttcacataagaccccacagggaaagtcttcactg
tttaccttaccaactacttccagagtcatgctgcttcccacaaccatctgcttagaacca
gatgtacagtattccatagatgtctatttttctcagtctctggaaggaggttcccatgct
cattcacacatcctggttgattctcttggtcttattccacaaatcagttcactggaaaat
tccttcagcaagcaggacttagaagagtatcagctacataactgcatggaaattgcctca
gaaataggatctcaggtgctccctggtgtatgtgaaaggcttattgtcagtctgtctgcc
ctgttacacaatggggccttggcctgtaactgtcaccctcaaggctcattggggcctcac
tgtagccaactgggaggtcagtgccagtgtcagcctcgggtgacggggcgcagctgtgac
agatgctcaccaggaagctacaagctgggccatcaaggctgtctcgaatgtcactgccat
cctcaaggctcaaagagcactgtgtgtgaccaaataaccggacaatgctcctgccacaga
gaggtgactggtcaccattgtgatcagtgcctggcgggctattttggatttcccaactgc
cgcccttgtctttgcaatggttttgctgaactttgtgacccagagacaggcttctgcatt
aactgtaaaggtcttacagctggaagaaactgtgaaagatgcatcgaaggttaccacgga
aatccttctgcaggacagtcctgtcgcccttgccagtgtccaggggtaccttcaagcaac
cagtattttgcccattcctgctatcagaatccttggagcacagatgtcatatgcaattgt
catcaaggttacacaggggcacagtgtgaagaatgtgctgccggattctatggaaatcca
agaactgggggagccccctgccagccctgtgcctgcaacaataacattgatgtcacggat
gcggggtcctgcaaccaagtgacaggggaatgccttagatgcctgcacaacactcaaggc
cccaactgccagttctgcaaaccgggttactttggctcagccttcaatcagacctgcaag
agatgctcctgttatcctttgggagtgaatcctgcagaatgtccccctgacctggaagtt
tgtctctgtgaccctgacactggctcatgtgcttgcttgccaaacgtcacaggacagaat
tgtgatcattgtgctgatggatactggaacctgatcccgagcagaggctgtcaaccatgt
gattgtgaccccaggacctctcacagcagccaatgtgatcagtttacaggccagtgtcca
tgtaaatcaggatacggtgggaaacactgcagggagtgtaaaaaaaatcattatggtggc
ccactaggacagtgcattccctgtgactgcaacagggaagggacccaggagcccatctgt
gaccaggccacaggcacgtgccactgccgagagggtgtgagtggccagcgatgtgaccac
tgtgcccgaggtcacggccaggaattccctgcttgtttgcggtgtcatctgtgctttgat
cagtgggaccataccatttctgctctctccaaagccgtgcaagggttaattaagctggct
gctaacatggaagataaaagagaggccctatctgtctgtgaggccgacttcaaaggcctc
agaaagaacatgtctgaaatagaaaagattttgaaatatcctgttttctcatctggagaa
ttcttaaaagtcaaggattatcaagattttttggggaaacagatcatgcaactaagtgaa
caactgaaaacagtgtatgaatttcaagatctgaaagaaacaataataacaatgggaaat
acagcaaatttcttggttgaagatattcagaaaaaaattggtttgtactccaaatcccat
aatacaagcatcatggattccttagagaatatcaagatgcattatcaaagatcatcatct
gctgaaaagataactaaggaaactttctctgacataaataactctaaaaaaaccaggact
gacttagttaccaccttagatacactattctcaaaaggaaacttatcgttggaaacatta
aagcagattaagttaccagatatccaaatattgagtgaaaaggtaattttcaccatgagc
aatttcccttgtaaggtgtgtggggaccatctgtgtgtgagttcatcctgcagtggccct
atttgtcctggctccctgaatctgtccagaaacgccttccagaaagcccaggatgcagaa
tctctaattcacaatttgaacaaccaggttcaaggattgaaaactcagataaaaaataca
agcaaactggcagaagtctcccaaaacaataccttacaactgagtgagaaactaagaaat
atgaaaaaccaaagtgaatctgaagaagaaaaaataaatcttttaattaaaaagctgaaa
aaaattgtgttagaggaaaacgtgcctccagaggatatagagaaaattgcaaatcatgta
ctcgacacccacctaccaataacatcacaaaatctaacccatgaacttgacaaaataagg
aaactgacacaacttcgtgaggactataagagagatgagaacaagctaaagaaagcagca
gatgaagttccaaagattttacaaaaggccaaagaagctgaagaagcagcaaatgttcta
ttgaatcttgacaacatgttgaatgacttgcaacaagttcagatcattcaaggacaagca
aattctgccatcacacagctgactgccaagataacaaatatcagaaagaatgtattgcag
gctgaaaatcaaacaaaagaaactcggagggaattggaccttgaagagcgacagttagac
ttgaaggatgggctttcccagctacagaccaagctgcaaaggaaccaagagcaaaccctc
cttgcaaaagctcaggctgaatcagctcagcgtcaggccgggggccttgaggagggctat
gttgagttgaaaaatcaatatgctgctcttcaacataagacaagcgctacaggactgaca
aaagaaacaatagaaaaagtgaaacggctaaaagatgcagcagaaaaattggctgaagat
acagaagacaaaataagaagagtaacggatttggaaaagaagattcgagatttaaattta
agtaggcaagaaaaagttgatcaactgaaacagttggaagatcaagtcattgcaattaaa
aatgaaattgttgaacaagaaaataaatatgctgaatgctatacttag
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integrated database retrieval system