Sorex fumeus (smoky shrew): 130027721
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Entry
130027721 CDS
T10594
Symbol
PSMC2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130027721 (PSMC2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130027721 (PSMC2)
09164 Neurodegenerative disease
05010 Alzheimer disease
130027721 (PSMC2)
05012 Parkinson disease
130027721 (PSMC2)
05014 Amyotrophic lateral sclerosis
130027721 (PSMC2)
05016 Huntington disease
130027721 (PSMC2)
05017 Spinocerebellar ataxia
130027721 (PSMC2)
05020 Prion disease
130027721 (PSMC2)
05022 Pathways of neurodegeneration - multiple diseases
130027721 (PSMC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130027721 (PSMC2)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130027721 (PSMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PRS7_OB
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
RuvB_N
AAA_28
AAA_7
AAA_14
Prot_ATP_ID_OB_C
AAA_33
AAA_18
TIP49
Sigma54_activ_2
Mg_chelatase
RNA_helicase
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
130027721
NCBI-ProteinID:
XP_055974546
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MPDYLGADQRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacctcggcgccgatcagcgcaaaaccaaagaagaggagaaggatgacaag
cccatccgagctctggatgaaggagatattgccttactgaaaacttacggtcagagtact
tactctagacagatcaagcaagtagaagatgacattcagcaacttctcaagaaaattaat
gagctcacaggtattaaagagtctgacactggtctggccccacctgccctctgggatttg
gctgcagataaacaaacactgcagagtgaacagcctttgcaggttgcaaggtgtacaaag
ataattaatgctgattcggaagacccaaaatacattatcaatgtgaagcagtttgccaag
ttcgtggtggacctcagtgatcaggtagcacctactgacattgaagaaggaatgagagtt
ggtgtggacagaaataagtatcaaattcatattccattgcctcctaagattgacccaaca
gttaccatgatgcaggtagaggaaaaacctgatgtcacatacagtgatgtgggtggctgt
aaggaacagattgaaaaacttcgagaagttgtggaaactccactactccatcctgagagg
tttgtgaaccttggcattgagccccccaagggcgtgctgctgtttgggccgccaggcaca
ggcaagaccctctgtgctcgggccgttgctaatcggacggacgcttgcttcatccgcgtt
attggatcggaacttgtacagaagtacgtcggtgagggggctcgaatggttcgtgagctc
tttgaaatggccagaacaaaaaaagcctgccttatcttttttgatgaaatcgatgctatt
ggaggcgctcgttttgatgatggtgctggaggtgacaatgaagtgcaaagaactatgttg
gaattgattaatcagctggatgggtttgatcctcgaggcaacattaaggttctgatggcc
actaacagacccgacactctggatccagcactgatgaggccagggagactggacagaaag
attgaatttagcttacccgatctagagggtcggactcacatttttaagattcatgctcgc
tcaatgagtgttgaaagagatatcagatttgaactgttggcacggctctgtccaaacagc
actggtgctgaaataagaagtgtctgcacagaagctggtatgtttgccatcagagcacgg
cgaaaaatcgccactgagaaggatttcttggaagctgtaaataaggtcattaagtcctat
gcaaagttcagtgctactccccgctacatgacatacaactga
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