Sorex fumeus (smoky shrew): 130027804
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Entry
130027804 CDS
T10594
Symbol
ABCB5
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130027804 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130027804 (ABCB5)
Transporters [BR:
sfum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
130027804 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_22
DEAD
AAA_29
AAA_30
AAA_14
RsgA_GTPase
Zeta_toxin
AAA_7
AAA_15
AAA_16
AAA_28
AAA_5
Rad17
DUF2207_C
AAA_33
G-alpha
APS_kinase
AAA_10
AAA_23
TMCCDC2
YebG
Motif
Other DBs
NCBI-GeneID:
130027804
NCBI-ProteinID:
XP_055974676
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MAQLYNGTSSGRQATKRFQLHSSWSAQPRKIAKLHNTVNPCADPTQFLPSLVRETLPPPA
PLAPQRFLNRALIDLLDVTPTEPAPGWSLSAAAVAGKQTPNMEEQPPSKVRRKVVGPIEI
FRFADRVDIILMVLGLLTSLMNEACLPIMSLILGEVSDKLTSGCLAKSSTKNYQNYTQSQ
EKLNKEMIVLTLYYVGVGVAALVFGYIQISFWVMAAARQTRRIRKQLFHSILAQDISWFD
SCETGEFNTRMTDDINKINDGIGDKIALLFQNISTFLIGLKIGLVKGWKLTLVTLSTSPL
IIASVAMFYKIVIELSSKELKAYSKAGAVAEEVLSSIQTVIAFGAQEKEIXRYTKNLKDA
KDFGIKKAIALKLSLGAVYFFMNGTYRLAFWYGTSLILRGEPGYTIGTVLAVFFSVIHSS
YCIGAGAPNFENFTIARGAAFNIFQVIDQKPNIGSFSTTGYKPECIKGIVEFKNVSFSYP
SKPSVKILKGLNLKIKSGETVALVGPNGSGKSTAVQLLQRLYDPEDGYITLDGNDIRTLN
VQHYRECIGVVSQEPVLFGTSISNNIKYRREGVTDEEVEKAAKEANAYDFIMEFPNKLNI
LVGDKGTQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESFVQAALEKASKGRTT
IVVAHRLSTIXSADLIVTIKDGIVVENGTHAELMASQGLHYSLAMSQDIIKAEEPMESMT
YSIEKTASSDPLCSTNSIKSGFTNKSEESIQNKKAHIPEVSLLTIFKLNKSEWPSMVLGT
LASILNGTVHPVFSIIFSKIVTMFENDDKTTLKHDAEIYSMIFVILGVICFISYFIQGLF
YGRAGETLTMRLRHLAFKAMLYQDISWFDDKENSTGALTTLAIDIAQIQGATGSRVGVLT
LNATNMGLSAIISFMYEWEKTLLILSIAPVCFLTGMIETAAIXGFANKDEQELKRAGKIA
TETVENIRTIISLTREKVFEKMYEEMLQTQHRNALKKAQIIGSCYAFSHAFIYFAYAAGL
QFGVNLIQAGRMTPEGIFIVFTEIAYGAMAMGETLVLAPEYSKAKSGAAHLFALLEKKPT
TNDNQEGKKVNACEGNIEFRDVSFVYPCRPDVLGLHGLSLCIEKGKTVAFIGSSGCGKST
SVQLLQRFYDPVKGQVLFDGVDAKELNIQWLRSQIAIVSQEPVLFNCSIAENIAYGDNSR
IVPLDEKKEAANAANIHSFIESLPEKYNTQVGLKGTQLSGGQKQTLAIARALLRKRKILL
LDEATSALDNESEKVVQHALDKVSEGRTCLMVTHRLSTIQNADLIVVLHDGKIKEQGTHQ
ELLRNRDMYFKLVNAQSVQ
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactctacaacggaacctcctcaggccgccaagccaccaaacggttccagctc
catagctcctggagtgcacagccacggaaaatagccaaactccataatactgtcaaccca
tgtgctgaccctacacaatttctcccttccttggtacgcgagacactcccgccaccggcc
ccgttggcaccacaaagattccttaaccgagctctcatagacctgctggatgtgacgccc
acagagccggcacctggctggtcactaagtgcagcggctgtagcaggaaagcagacacca
aatatggaagaacaaccaccatccaaagtaagaaggaaagttgttggaccaattgagata
tttcgctttgctgatagagtggacatcatactcatggtcttaggattgctgacatcacta
atgaatgaagcctgtcttcctataatgtcactgattttaggagaagtgagtgataaactt
actagtggatgcttagccaaaagcagcacaaaaaattatcagaactatactcaatctcag
gagaagctgaataaagagatgattgtattaaccctgtattatgttggagtaggagttgct
gccttggtgtttggctatatacagatttctttttgggttatggctgcagcgcgacaaacc
agaagaattcgaaaacaactttttcattcaatcttggcacaggacatcagctggtttgac
agctgtgagactggtgaatttaacactcgcatgacagatgacatcaacaaaattaatgat
ggtattggagacaagattgctctattatttcaaaacatatctacttttttaattggcctg
aaaattggtttggtaaagggctggaaactcacactggtaaccttgtccacatctcctctt
ataattgcttctgtggccatgttttataagatagtcatcgaactgagcagtaaagaactt
aaagcttattccaaagcgggtgctgtagcagaagaagttttgtcatcaatccaaacagtc
atagcctttggggcccaagagaaagaaatttaaaggtatacaaagaatctaaaagatgca
aaggattttggcatcaaaaaggcgatagcattaaaactctctcttggtgctgtgtacttc
ttcatgaatggaacctatagacttgctttttggtatggaacttccttgattcttagagga
gaacccggttataccattggaactgttcttgctgttttctttagtgtaatccatagtagt
tattgcataggtgcaggagcacctaactttgaaaacttcactatagcccgaggagctgct
tttaatattttccaggttattgatcagaaacccaatataggtagcttttcaacaacagga
tataaacctgaatgcataaaaggaattgtggaatttaaaaatgtttctttcagttatcca
tcaaagccatctgtcaagattctgaaaggtctgaatctcaaaattaagtctggagagaca
gtggccttagttggtcccaatggcagtgggaagagcacagcagtccaactcttgcagaga
ttatatgacccggaagatggctatatcacgctggatggtaatgacataagaactttaaat
gtgcaacattatcgtgaatgtattggagtcgtcagccaagagcctgttctgtttgggacc
agcattagcaacaacattaaatacagacgagaaggtgtgactgatgaagaggttgaaaaa
gcagcaaaggaagccaatgcttatgattttataatggagtttcccaataaattaaatatc
ttggtaggagataaaggaactcaaatgagtgggggacagaaacagagaatcgcaattgct
agagctttagttcgaaaccccaagattctgatcttagatgaagctacatctgctctggat
acagaaagtgaatcatttgttcaagctgcactggagaaggcaagtaaaggtcggactaca
attgtagtagcacaccggctttccactatttgaagtgcggatctgattgtgaccataaaa
gatgggatagtggtggaaaatggaacacatgctgaactaatggcaagtcaaggtctacat
tattcactggcaatgtcacaagatattataaaagctgaagaaccgatggaatcaatgaca
tattctattgaaaaaactgccagctcagatcccctgtgttcaacgaacagcatcaagtca
ggctttactaacaaatctgaggaatccatccaaaataaaaaggcacatattcctgaagtg
tcgctattaacaatctttaaattaaacaagtctgaatggccttctatggttctggggacg
ttggcttctattttaaatggaactgtccatccagtattttccatcatcttttcaaaaatc
gtcactatgtttgaaaatgatgataaaaccacattaaagcatgatgcagaaatttattct
atgatatttgtcattttgggtgttatatgctttatcagttacttcattcagggattgttt
tatggaagagcaggggaaactttaactatgagattgagacatttggcatttaaagccatg
ttatatcaggatatttcctggtttgatgataaagaaaacagcacaggagctttaacaaca
ttagccatagatatcgctcaaattcaaggagcaacaggctcaagggttggtgtcttaaca
ctaaatgcaactaacatgggactatcagctattatttccttcatgtatgaatgggagaag
acactcttgattctgagtattgctccagtatgttttctgacaggaatgattgaaactgca
gcaatanacggatttgccaacaaagatgagcaagaacttaagcgtgctggaaagatagca
acagaaactgtggagaatatacgtactatcatatcattaacaagagaaaaagtctttgag
aaaatgtatgaagagatgcttcagactcagcacagaaatgccttgaagaaagcacagatc
attggaagctgttatgcattcagtcatgcctttatatattttgcctacgcagcaggactt
caatttggagtcaatttaattcaagctggacgaatgaccccagaaggcatatttattgtt
tttactgaaatcgcatatggagctatggccatgggagaaacacttgttttggcacctgaa
tattccaaagccaagtctggtgctgcacatctgtttgctttgttggaaaagaagccaact
accaatgacaatcaagaaggaaaaaaagtaaacgcatgtgaaggaaatatagagtttcga
gatgtctctttcgtctatccatgccgcccagatgtgctgggcctccatggcttatccctc
tgtattgagaaaggaaagacagtagcatttattggcagcagcggctgtgggaaaagcact
tctgtccaacttctgcagagattttatgatcccgtgaaaggacaagtgctgtttgatggt
gtggatgcaaaggaattgaacatacagtggctccgttctcaaatagcaattgtttctcaa
gaacctgtgctcttcaactgtagcattgctgagaacatcgcctatggtgataacagccgt
attgtgccattagatgagaaaaaagaagcagcaaatgcagcaaatattcactctttcatt
gagagtctccctgagaaatacaacacccaagttggactgaaaggaacacagctttctggc
ggccagaaacaaacactagctattgcaagggctcttctccgaaaacgaaaaattttattg
ctggatgaggccacgtcagcccttgataatgaaagtgaaaaggtggttcagcatgccctt
gataaagtcagtgagggaagaacatgcttaatggttactcacagactctccaccatacag
aacgcagatttgatagtggttttgcatgatggaaaaataaaggagcaaggaactcatcaa
gagctcctgagaaaccgagacatgtattttaaattagtgaatgcacagtcagtgcagtga
DBGET
integrated database retrieval system
