Sorex fumeus (smoky shrew): 130027986
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Entry
130027986 CDS
T10594
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
130027986 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130027986 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfum03310
]
130027986 (RORB)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130027986 (RORB)
Nuclear receptors [BR:
sfum03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130027986 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130027986
NCBI-ProteinID:
XP_055974737
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSNSISNGLNNLSSEASGTYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKSLGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaatcgaagtgataccatgcaagatttgtggcgataagtcctccgggatc
cactacggagtcatcacctgtgaaggctgcaaggggttctttagaaggagccagcagaac
aatgcctcttattcctgcccaaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtccagagatgctgtg
aagtttgggaggatgtccaagaagcaaagggacagtctgtacgccgaggtgcagaagcat
cagcagcggctgcaggagcagcggcagcagcagagcggggaggcagaagccctcgccagg
gtgtacagcaacagcatcagtaacggcctcaacaacctgagcagcgaggccagcggcact
tatgccaatggacacgtcatcgatctgcccaagtcggagggttattacagcgtggattct
ggccagccatctcctgatcagtccggactcgacatgactggaatcaaacagatcaagcag
gaacccatctatgacctcacctctgtccccaacttgtttacctatagctctttcaacaac
gggcagttagcaccgggcatcaccatgaccgagatcgatcgaattgcacagaacatcatt
aagtcccatctggagacatgtcagtacaccatggaggaactgcaccagctggcatggcag
acccacacctatgaagagatcaaagcatatcaaagcaagtccagggaagcactgtggcaa
caatgtgccatccagatcactcacgccatccagtatgtggtcgagtttgcaaagcggata
acaggcttcatggagctctgtcagaatgaccagattctactcctgaaatcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggagggatgcaaatgttcaaatccttaggttctgatgacctagtaaat
gaggcttttgactttgcaaagaatttgtgttccttgcaattgaccgaggaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgattgaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcat
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacagcagtctgc
aacttgcacggggagaagctgcaggtatttaagcaatcacatccagacatagtgaacacc
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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