KEGG   Sorex fumeus (smoky shrew): 130028032
Entry
130028032         CDS       T10594                                 
Symbol
GCNT1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
  KO
K00727  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:2.4.1.102]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum00512  Mucin type O-glycan biosynthesis
sfum01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    130028032 (GCNT1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sfum01003]
    130028032 (GCNT1)
Enzymes [BR:sfum01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.102  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
     130028032 (GCNT1)
Glycosyltransferases [BR:sfum01003]
 Glycan extension
  O-Glycan
   130028032 (GCNT1)
SSDB
Motif
Pfam: Branch EndA_linker
Other DBs
NCBI-GeneID: 130028032
NCBI-ProteinID: XP_055974760
LinkDB
Position
Unknown
AA seq 427 aa
MLWRLLPRRLLCFPTKYFIWLLIFSLVTFTILRLHQKPFVSVHHLELRGENPSSDINCTK
VLQGNEEEIEKVKLELLTVKFRKQPRWTTYDYINMTSDCTSFIKRRKYFTEPLSKEEAAF
PIAYSIVVHHKIEMFDRLLRAIYMPQNFYCIHVDKKSEESFLEAVTGIASCFSNVFVASR
LENVVYASWNRVQADLNCMQDLYSMSATWKYLINLCGMDFPIKTNLEIVRKLKSLMGENN
LETEKMPHNKKERWKKHYTVVNGKLTNTGTDKAPPPLETPLFSGSAYFVVSRQFVGYVLE
NERIQRFMEWAKDTYSPDEYLWATIQRIPEVPGSVSLSHKYDMSDMLAIVRFVKWHYFEG
DTAKGAPYPPCNGVHVRSVCIFGAGDLKWMLGTHHLFANKFDTDVDLFAIQCLDEHLRHK
ALQALKY
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgctgtggaggctgctacccagaagacttttgtgttttcccactaaatacttcatctgg
cttcttattttttccctcgtcactttcactattctaagacttcatcaaaagccatttgta
agtgttcaccatctggagctgcgtggtgagaatcctagtagtgacattaattgcaccaaa
gtcttgcaaggcaatgaagaggaaattgaaaaagtcaagcttgagctcctaacagtgaaa
tttcgaaagcaacctcgatggaccacctacgactacataaacatgaccagcgattgtacc
tctttcatcaagaggcgcaagtatttcaccgaacccctcagtaaggaagaggctgcgttt
ccaatagcctattcgatagtggtccatcataaaatcgaaatgtttgacaggctcctgcgc
gcgatctatatgccccagaatttctattgcattcatgtggacaaaaagtcggaggaatcc
tttctggaggcggtaactggcattgcgtcctgtttcagtaatgtgtttgtagccagccgg
ctggagaatgtagtctatgcttcatggaaccgtgtccaggcagatctcaactgtatgcag
gacctgtacagcatgagtgcgacttggaagtacttgatcaatctttgcggtatggatttc
cctatcaaaaccaacctggaaattgtcaggaagctcaagtccttgatgggtgaaaacaac
ctggagacagagaaaatgccacacaataaaaaggaaaggtggaagaaacactacacagtg
gtcaatgggaagctgacgaacactggcaccgacaaagcgccccctcctcttgagacacct
ctcttttccggcagtgcctattttgtggttagtaggcagtttgtggggtatgtgttagag
aatgaaagaatccaaaggtttatggaatgggcaaaggacacgtacagccctgacgagtat
ctctgggccactattcagcgcatccccgaagtcccaggctccgtgtccttaagccacaag
tatgacatgtctgacatgcttgccatcgttaggtttgtcaagtggcactactttgaaggt
gatactgccaagggcgctccctaccccccctgcaacggggtccatgtgcgctccgtgtgc
atctttggagcaggtgatttgaagtggatgctgggcacccaccatttatttgccaataaa
tttgacacagatgttgacctttttgccatccaatgcctggatgaacatcttcggcataaa
gccctgcaggcattgaaatactga

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