Sorex fumeus (smoky shrew): 130028098
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Entry
130028098 CDS
T10594
Name
(RefSeq) tripartite motif-containing protein 75-like
KO
K12037
tripartite motif-containing protein 75
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130028098
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130028098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
PRY
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-Nse
RING_XB3-XBAT31
TRAF3_RING
Sina_RING
zf-B_box
zf-RING_10
DUF5955
Motif
Other DBs
NCBI-GeneID:
130028098
NCBI-ProteinID:
XP_055974801
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MEVLAALATLQAELTCPICLDYLKDPVTIECGHNFCDSCIRMSWEDLQDTFPCPVCHHPC
PQRCFSVNPQMGMLVDMAKLFHSSRREMKPEKKRRYEELNEGLTLFCEDDQELICSQNTQ
PPEHHGHHLKLMAEAAADHRHRLNGHTELLKKQMEEVKNLIVSQDRNLLQLREEVRKQRS
QLALEFEFLNRLIANEQEAALSRWVEKEKDFERKLSTSLTAISEHISVLKGLQKEVAERS
MMSPGMVLKEFKSITPRHKNLEPPVLQSQHFSDKGFPISLYLTLKNIIQKFREEVTLDPK
TAHPSLCVSEDRKTVNYVWKRSKDDGEVRDTDYAVVLGSEGYSSGRHYWEVQVGNKTEWA
VGVCTDTPSSKEQPPLLGQNSSWTIQLQDGNYLAGGSVPVILSVKNKPQKIGIYLDYELG
EVSFYDASDRSHIYSLTETFSDVLKPYFWVGWDSTPLILCEVEIL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgttggcagccctggcaacgctgcaggcagagctcacctgtcccatctgcctg
gactacctcaaagacccagtcaccattgaatgtgggcacaacttctgtgactcctgcatc
cggatgtcatgggaggatctacaggacacatttccttgtcccgtctgccaccacccttgc
ccacagaggtgctttagcgtcaaccctcagatgggaatgctggtggacatggccaagcta
ttccacagctctaggagagagatgaagccagaaaagaagcgcaggtatgaggagctcaat
gaaggcctgactctgttctgtgaggatgaccaagaactgatatgttcccagaacacacaa
ccccctgaacaccatggccaccacctgaagctcatggcagaggctgccgctgatcacaga
cacaggctcaatggtcacactgaactcctaaagaagcagatggaagaggtgaagaactta
attgtctcccaagacaggaatctcctgcagctgagagaggaggtgagaaagcagaggagt
cagttagctttggaatttgagttcctgaatcggctgatagcaaatgagcaagaagctgca
ctctccaggtgggttgaaaaagagaaggactttgaaaggaaactaagtaccagtctcact
gcaatctctgagcatatttccgtcttgaaaggtctacagaaagaggtggcagagaggagc
atgatgtctccagggatggtgttgaaagagttcaagagcatcacaccacgccataagaat
ctggagcccccggtcctacagtcccagcacttcagcgacaaaggctttcccatttcgcta
tacttaacactgaagaacattatacagaaattcagagaagaggtgactctggaccccaaa
acagcacaccccagtctgtgtgtgtctgaagatagaaagactgttaactatgtgtggaaa
agatcaaaagatgatggggaagtgagagatactgactatgcagtggttctgggctctgaa
ggatacagttcaggccgacattactgggaggtgcaggtgggtaacaagactgagtgggcc
gtgggggtgtgcacagacaccccttccagcaaggagcagccaccccttttgggtcagaat
agttcctggacaatccagttacaggatggcaactacttggctggaggctctgtacctgtc
attctctctgtgaagaacaagccccaaaagattggcatttacctggactatgagttgggt
gaggtttccttctatgatgctagtgacaggtctcatatctattctttaactgagacattt
tctgatgtactaaagccttatttctgggtgggttgggattctactcctcttatactgtgt
gaagtagagattctatag
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