Sorex fumeus (smoky shrew): 130028377
Help
Entry
130028377 CDS
T10594
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Others
Others
130028377 (LRBA)
Endosome - Golgi transport
130028377 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130028377 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130028377
NCBI-ProteinID:
XP_055975114
LinkDB
All DBs
Position
Unknown
AA seq
2855 aa
AA seq
DB search
MASGDQKVPSPPPTGDDGGGGGKAEEPPAEGGALSLTPGLPIRGIRMKFAVLTGLVEVGE
VSNRDLVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDITCQAEIWSMFTAILK
KSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH
VSRSVLELCLAFSKYLSNLQSGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFI
STVNIYNAIRRVGTVLLIMHTLKYYYWTVNPQNRSGITPKGLDGPRPNQKEILSLRAFLL
MFIKQLIVKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GLRVIYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLI
TMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCQESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPQNSDEQKITEMVYAIFRILLY
HAVKYEWGGWRVWVDTLSITHSKVTFEIHKESLATVFREHQGKGDDEVEQCPSNLAQAIS
GINRDVHASVASQPPDIKDSPVSSHSTRNSDENSSIEKTSLVDSTSNIEPQTHNTSNEER
KVGQENQELLDQVSLEKTHVNEAIHAVDLEVSSDKVENVTLPSNSLKTTDKDLITVNEVT
ASVSSPSEDDASEVPELLEKSIVEDEDDDDYVELKVESSPTEVINLPTELQDSSLTPAAS
EASEKLDVSNNDHKLLGQEEEPVRKQTETDTQDSKDFGILTMTASESSADSPDKSASQTV
QSDTDQLLEEGKNVTKESKLISDSHANNLECPTSEPRIAKLDVSSVATDTERLELKASVN
TEAAQSHQPVLEMSRQQERPGQGIAPDAVNGQRRDSRSTMFRIPEFKWSQMHQRLLTDLL
FSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLSAAT
SATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQC
LRLVCAVAVRNCLECQQHSQLKSKGDILKGQKTIHSLIPMGKSAAKSPVDIITGGISPIR
DLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERCTQ
ETGSESGNLSLTDVENTPTVSAAAALSVEESECTSSSGPRRDSGIGEETASGLGGRVDAA
PQAAPPSVIAGPDAVSEVLSTLSLEVNKSQETKNDEGNELDNKAVPSVPVSKNVNVKDIL
RSLVNIPADGVTVDPALLPPSCLGTLNDLSAEQPVQFRSFDRSVIIATKKSAVLPSVPSA
SVSSNAVSVVSSVDSAQTSDGGGDSPGGRSSNAKLPSVPTVGSVPPDQVSNMSITERLEH
ALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEW
QNSIQKNAGLAFIELVNEGRLLSQTMKEHLVRVANEADFILSRQRAEDIHRHAEFESLCA
QYSANEREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSTVSRPREFWRL
DYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSPALGNQNSENE
ILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDP
NFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDSATV
KKVVNSLPRVGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMFLNTIA
GRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWED
DQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRD
TSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRINRLALES
EFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVSLNSITDPVLREAIEAQIRS
FGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQ
PGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGIHRRQISD
LLDQSIQVHSQCFVITSDNRYILICGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLTRSE
SYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAILTGHDFEITCAAVCAE
LGLVLSGSKEGPCLIHSMNGDLLRTLEAPEKCLKPKLIQASREGHCVIFYENGCFCAFSV
NGKLQATVDTEDNIRAMQLSRDGQYLLTGGDHGVVVVRRVSDLKQLFAYPGCDAGIRAMA
LSYDQRCVISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8568 nt
NT seq
+upstream
nt +downstream
nt
atggctagtggggaccagaaagtcccttctccgccaccaacaggtgatgacgggggaggt
ggagggaaagcagaagaaccccccgccgaagggggcgcgttgtccctgacgccggggctc
cccatcaggggcatcaggatgaagttcgccgtgttgaccgggttggtggaagtcggagaa
gtgtccaatagggacctcgtagaaacggtctttaacctgcttgttggagggcagtttgat
ttggaaatgaattttattattcaagaaggtgagagtatcatctgtatggtggatctactg
gaaaaatgtgatattacttgccaagcagaaatctggagcatgtttacagccatactgaag
aaaagcatacggaatcttcaagtctgcactgaagttggccttgtagagaaagtgcttggg
aaaattgaaaaagttgacaatatgatagcagatcttttagttgatatgttgggagtgctg
gctagctataatctgacagttcgagaactaaagctattcttcagtaaacttcaaggagat
aaaggacaatggcctccacatgctgggaagttattgtctgtgttaaagcatatgcctcaa
aaatatggtcctgatgcctttttcaacttccctggaaagagtgctgcagctattgcatta
cctcctatagccaaatggccataccagaatggttttacatttcatacttggcttagaatg
gatcctgtaaataacatcaatgtggataaggataaaccatacttgtattgtttcagaacc
agcaaaggtcttggttattctgctcactttgttgggggctgtttgattataacatccata
aagtcaaaaggaaaaggctttcaacactgtgtgaagtttgatttcaagcctcaaaagtgg
tatatggtaactatagtacacatttataatcgatggaagaacagtgagctccgatgttat
gtaaatggtgagctggcttcctatggagagataacatggtttgtcaacaccagtgatacc
tttgacaaatgtttccttggttcatcagaaacagcagatgctaatagagtattctgtggt
cagatgactgcagtttacctttttagtgaagctcttaatgctgcccagatttttgccatt
tatcagttgggccttggatacaagggtacatttaaattcaaagcagaaagtgacctgttc
cttgctgagcatcacaaacttttattgtatgatggcaagctgtctagtgccattgcgttc
acatacaatccacgtgctacagatgcccagctctgcctcgaatcatcccctaaggacaac
ccctcaatttttgttcattcaccacatgcacttatgctacaggatgtgaaggcagtttta
acacattctatccaaagtgctatgcattcaatcggaggagtacaagtgctctttccactt
tttgcacagttggattacaggcaatatttatctgatgaggttgacttgactatatgttca
actttgctggcttttatcatggagctgttgaagaattcaatcgctatgcaagaacagatg
cttgcttgcaagggcttcttggtaataggatatagtctggaaaagtcttccaaatcccat
gtcagcagatcagtacttgaactttgccttgcgttttctaaatatctgagtaatctgcag
agtgggatgcctttgctcaagcagttgtgtgatcatatacttcttaacccagctatatgg
attcataccccagccaaggttcagttgacactttatacttacttgtccacggaattcatc
agtacagtcaacatatataatgccattcggagagttggaacagtacttcttataatgcat
acactgaagtactattattggacagtaaatcctcagaatcgaagtggtatcaccccaaaa
ggattagatgggccgcgacctaatcaaaaggaaatactttctctacgagcattcttattg
atgttcattaaacaattaattgtgaaggattctggagtaaaggaagatgaactacaagct
attcttaattacctactcactatgcatgaggatgacaatctaatggatgtcctacagtta
cttgtggcattaatgtcagagcaccctaactcaatgattcctgcctttgaccaaaggaat
gggttacgtgttatctataaacttatggcatcaaccagtgaaggaatcagagtacaagct
ctcaaggcaatgggttattttttaaaacacctggcccctaaaagaaaagctgaagtcatg
cttggtcatggattgttttcattgctagctgaaagactcatgcttcagacaaatttaatc
acaatgaccacctacaatgtcttatttgagattcttatagaacagatttgtactcaggtg
atacataaacagcatccagatcctgattcttcagtaaagatacagaatcctcaaattctg
aaagtaattgcgaccttacttcgaaattctccccagtgtcaagagagtatggaagttcgc
agagccttcctttctgacatgattaaactttttaataatagtagagaaaacagaaggagc
ttgctacagtgctctgtgtggcaggagtggatgctttctctctgctattttaatcctcag
aattcagatgagcaaaagataacagaaatggtatatgccatattcagaatcctgctttac
catgcagtcaaatatgagtggggcggttggcgtgtatgggtggacaccttatcaatcaca
cattcaaaggttacttttgaaatacacaaagaaagtcttgccactgtatttagggaacac
caagggaaaggtgatgatgaagtagagcagtgtccttcaaatctagcccaagcaatttct
ggaattaacagggatgttcatgcttcagtagcatcccagccaccagatatcaaggattct
cctgtatcttctcacagcaccagaaatagtgatgaaaattcaagtattgagaaaacaagt
ttagtagactctacgtccaacattgagccacaaactcacaatacatcaaatgaggaaagg
aaggttggtcaagaaaatcaggagttattagatcaagtttctttagaaaaaacacatgtg
aatgaagcaatacatgcagttgatttagaagtatcttctgataaagtagaaaatgtgact
cttccctctaattctttgaaaacaactgacaaagacttaattactgttaatgaagtaact
gcctctgtaagttctccttcagaagatgatgcttcagaggtaccagaattattggagaag
tctatagtagaggatgaagatgatgatgattatgtggaactgaaggtggaaagcagtcct
acagaggtaatcaacctgcctacagagctccaagacagtagtttgacaccagctgcatct
gaagccagtgaaaagttggacgtgtccaataatgatcacaaattactaggtcaagaggaa
gaacctgtaagaaagcaaactgaaactgacacgcaagactctaaagattttggaatcttg
actatgacagcatcagaatcctcagctgactcacccgacaagtctgcttctcaaactgta
caatcagacactgatcagttgcttgaggaagggaagaatgtaacgaaggagagtaaatta
ataagtgattctcatgctaataatctggagtgccctacttctgagccgagaattgctaaa
ttggatgtttccagtgttgctactgacacagagagattggaattgaaggccagtgtgaat
acagaggcagctcagtctcatcagcctgtgcttgagatgtcaaggcaacaggaacggcca
gggcaagggatagcaccagatgcagttaatggacaaaggagggattccagatctactatg
tttcgtattcctgagttcaaatggtctcagatgcatcagcgtttactcactgatttactg
ttttcaatagaaacagatatacaaatgtggagaagccattcaacaaagacagttatggac
ttcgtgaatagcagtgataacgtcatctttgtacacaacacaattcatctcatctctcaa
gtgatggacaatatggtcatggcttgtgggggtatactgccattgctttcagctgctacc
tcggctacacatgagttggagaatattgaacccactcaaggcctttcaatagaagcctct
gtgacatttttgcagaggctaataagtcttgtggatgtacttatatttgcaagttctctt
ggctttactgaaattgaagctgaaaaaaatatgtcatctggaggaattttacgacagtgt
cttcgactagtgtgtgcagtggcagtaagaaattgcttagagtgtcagcagcattcacaa
ctaaaaagtaaaggagatatattaaaaggccagaaaacaatacacagcctgattcccatg
gggaaatctgcagcaaagagtccagtggacattataactggtggtatatctccaataaga
gatcttgacagacttctacaagatatggatattaatcgacttagagcagtggttttcaga
gacatagaggatagcaagcaagctcaatttttagcattggcagttgtatattttatctct
gttcttatggtctcaaagtacagagatattttggaaccccaaaatgaaagatgtactcag
gaaactggtagcgaaagtggaaatttatcacttactgatgtagaaaacacaccaactgta
agtgcagccgctgcattatcagtggaagaatctgagtgcacgtcatcctctggtccgaga
agggactcaggcattggggaagaaacagcttccggtttaggaggccgtgtggacgcagct
cctcaggcagcacctcccagtgtcattgcaggtccagatgcagtcagtgaggtgctttcc
actctttctttagaagtcaataaatctcaggaaaccaaaaatgatgaagggaatgagttg
gataataaggctgtaccatcagttcccgtttccaaaaatgtcaatgtgaaggacattctc
cgcagcctagtgaacataccagcagatggagtcacagtggatcctgccctcctgccacca
tcctgccttggcactcttaatgatctgtctgcggagcagcctgtgcagttcaggtctttt
gacagaagtgtcatcattgcaaccaaaaaatcagcagttttaccctctgtgccttctgca
agtgtgtcttcgaacgctgtcagcgtggtgtcttcagtggactcagctcagacttcagat
gggggaggagactcgccaggtggtagatcgtctaatgcaaaattgccttcagttccaaca
gttggttcagttccaccagaccaagtttcaaatatgagtatcactgaaagacttgaacat
gctctggaaaaggcagctcctcttttgagagaaatttttgtggattttgcaccttttctt
tctcggacgcttttgggtagccacggacaagaattacttatagaaggaacaagtttggtt
tgcatgaagtctagtagttcagttgtggagttggttatgctgctatgttctcaggaatgg
cagaattctattcaaaagaatgcaggccttgcttttattgaacttgtcaatgaaggaagg
ttacttagccaaacaatgaaggagcatctggtaagagtggcaaatgaagctgattttatc
ctgagcaggcagagagcagaagatattcacagacatgcggaatttgagtcattgtgtgcc
cagtattctgcaaatgagcgagaagatgagaagatgtgtgatcatttgatcagagcagct
aaatatcgagaccatgtgacagctactcaacttatccagaaaattatcaacattctcaca
gacaagcatggagcctggggaaattctactgtgagtcgtcctcgtgagttctggcgcctt
gactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccctctaggatcg
acacatcctgaagcgacactaaaaacagccgtggaacacgctgcagatgaagatatcctt
gctaaaggcaaacagtccatcaagagtccggctttaggaaatcagaactcagagaacgag
atcctcctggaaggcgatgacgatactctgtcctccgtggatgagaaagatttagagaat
cttgcgggtcctgttagcctgagcacaccagctcagcttgtggccccctctgtggtagtc
aagggcactctctccgtcacctcctctgaactctattttgaggtggatgaagaggaccct
aacttcaagaaaatcgaccccaagatcctggcatatacagaagggctgcatggaaaatgg
ctgttcacagagattcgatcaatcttttctcgtcgttatcttttgcaaaatacagccctg
gagatctttatggcaaacagagttgctgtgatgttcaacttcccagactctgctacagta
aagaaagtggttaactctctacctcgtgtgggtattggaaccagttttggattgcctcaa
accaggcgcatctcattggctagtccacgtcaacttttcaaagcttctaatatgactcag
cgatggcagcatagagagatttcaaattttgagtacctgatgtttctcaatacaatagca
ggacggagttacaatgacttaaatcagtacccagtctttccctgggtcatcactaattat
gaatcagaggaattggatctcaccttacctagtaacttcagggatttgtccaagccgatc
ggagctttgaatccaaaaagagcagcattttttgcagagcgctatgaatcatgggaagat
gatcaagttccaaagttccactatggtactcattactcaactgcgagttttgttcttgca
tggctgctaagaatagaacccttcacaacttacttcctaaatctgcaaggagggaaattt
gatcatgccgatcgaactttttcatcaatttccagagcttggcgaaatagtcagcgggat
acatctgatattaaggagttgatccctgaattttattatctccctgagatgtttgtcaac
ttcaataattacaatcttggagtgatggatgatgggacagtggtatctgatgttgaactt
cctccttgggccaaaacctcagaagaatttgttcgcataaacagactggccctggagagt
gaatttgtttcttgccagcttcaccaatggattgatctaatttttggctataagcagcaa
ggaccagaggcagttcgatctctcaatgtgttctactacctgacctacgaaggagcggtc
agtctgaattccatcactgaccctgtgctaagagaggccattgaagctcaaatccgcagt
ttcggacagacaccctctcagctcctcatcgagccccatcccccccggggttccgccatg
caagtgtatctcctcctgcagagtccattgatgttcacagaccaagcccagcaggatgtt
atcatggtcctaaagttcccttccaactcccctgtcactcacgtggcagccaacacccag
cctggtttggcgactcctgctgtgatcacagtcactgctaacaggctcttcgctgtgaac
aagtggcacaatcttcctgctcatcaaggtgctgtacaagaccagccataccagctgcca
gtggaaatcgatcctctcatagccagcaatacaggaattcacaggaggcaaatctctgac
cttttagaccaaagtattcaagtccactcccagtgctttgtcatcacttccgacaaccgc
tatattctcatctgtggcttctgggacaagagtttccgagtctactccaccgacacaggc
aaattgatccaagtggtgtttggccattgggatgttgtcacttgcctcactcgttctgag
tcatatatcggaggaaattgctacattctctccgggtcacgtgatgcaactctgctgctc
tggtactggaatgggaaaagcagcgggattggagataaccctggcagcgagaccaccacg
ccgcgggccattctgacgggccacgactttgagatcacctgcgcggccgtctgcgcggag
ctgggcctggtgctgagcggctcgaaagagggaccatgcctcatccattccatgaatgga
gacctgctgaggactctggaggcgccagagaagtgcctgaagcccaaactcatccaggcc
tcgcgagagggccactgcgtcattttctatgagaatggctgcttctgtgcattcagcgtg
aacgggaagctccaggccacggtggacacggaggataacatcagggccatgcagctgagc
cgcgacgggcagtacctgctcaccggaggagaccacggggtggtcgtggtccggcgggtg
tcagacctcaagcagctcttcgcctatccaggctgtgatgccggcatccgggccatggcc
ctgtcttatgaccagaggtgcgtcatttccggcatggcctcaggaagcatcgtgctcttc
tacaacgacttcaaccggtggcaccatgagtaccaaacccgctactga
DBGET
integrated database retrieval system
