Sorex fumeus (smoky shrew): 130028436
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Entry
130028436 CDS
T10594
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05014
Amyotrophic lateral sclerosis
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130028436 (NEFM)
05022 Pathways of neurodegeneration - multiple diseases
130028436 (NEFM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130028436 (NEFM)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
130028436 (NEFM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
130028436
NCBI-ProteinID:
XP_055975183
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MSYALDSLGNPSAYRRVTETRSSFSRLSGSPSSGFRSQSWSRSSPSTVSSSYKRSSALAP
RLAYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKV
HYLEQQNKEIEAEIQALRQKQATQAQLSDAYDQEIRELRTTLELVNHEKAQVQLDSDHLE
EDIHRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHE
EEVADLLAQIQASHITVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKL
TEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSY
QDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSI
TGPLYTHRQPSITISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDALAAIAE
ELAVSMKEEVKEEEAEEEEEEAEKEVATKKSPVKATAPELKGEEEGEKEEEEEGEEEEEE
EEEEEDEGVKSDQAEEGGSEKEGSSEKEEGEQEEEEEAEAEGNGEETEAKDEKKAEKKSE
KVASPKEELVVEAKEEKPAEKAKSPMPKSPVEEVKPKADAGAGKGDQKEEEVKVEEVKKE
AKETQKEEKGEKKEEKPKDVPEKKKAESPVKEEVVEEVLTVTKSPKVSSEKDAKEEEKSP
QQEKGKEKAEEEGGSEEEGSDQGSKESTKEDIAVNGEVEGKEEEEQTKEKGTGGEEEKGV
ITNGLDLSPADDKKGDDRSEDKVVVTKKIEKITSEGGDGATKYITKSVTVTQKVEEHEES
FEEKLVSTKKVEKVTSHAIVKEVTQSD
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgccctggactcgctgggcaacccgtccgcctaccggcgggtcaccgagacc
cgctccagcttcagccggctcagcggctcgccgtccagcggcttccgctcgcagtcgtgg
tcgcgcagctcgcccagcaccgtgtcctcgtcgtacaagcgcagcagcgcgctcgccccg
cgcctcgcctacagctcggcgatgctcagctcggccgagagcagcctcgacttcagccag
tcctcgtccctgctcaacggcggctccggcccgggcggcgactacaaactgtcccgctcc
aacgagaaggagcagctgcaggggctcaacgaccgcttcgccggctacatcgagaaggtg
cactacctggagcagcagaacaaggagatcgaggcggagatccaggcgctgcggcagaaa
caggccacgcaagcccagctgagcgacgcctacgaccaggagatccgcgagctgcgcacc
accctggagctggtgaaccacgagaaggcgcaggtgcagctcgactcggaccacctggag
gaggacatccaccggctcaaggagcgcttcgaggaggaggcgcggctgcgcgacgacacc
gaggcggccatccgggcgctgcgcaaagacatcgaggagtcgtcgctggtcaaggtggag
ctggacaagaaggtgcagtcgctgcaggatgaggtggccttcctgcgaagcaaccacgag
gaggaggtggccgacctgctggcccagatccaggcgtcgcacatcaccgtggagcgcaaa
gactacctgaagaccgacatctcgtcggcgctgaaggagatccgctcgcagctcgagtgc
cactccgaccagaacatgcaccaggccgaagagtggttcaagtgccgctacgccaagctc
accgaggcggccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgag
taccggcgccagctgcagtccaagagcatcgagctcgagtccgtgcgcggcaccaaggag
tccctggagcggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctac
caggacaccatccagcagttagaaaatgagcttcggggcacaaagtgggaaatggctcgt
catttgcgggaataccaggacctcctcaacgtcaagatggctctggatatcgaaatcgcc
gcctacagaaaactcctggagggtgaagagaccagatttagcaccttttcaggaagcatc
acggggccactgtatacacaccgacagccctcaatcacaatatccagtaagatccagaaa
accaaagttgaggctcccaagctaaaggtccaacacaagtttgttgaagagatcatagaa
gaaaccaaagtagaagatgagaaatcagaaatggaagatgccctggcagccattgcagag
gagctggctgtgtccatgaaagaggaagtaaaggaagaggaagcagaagaagaggaagag
gaagcagaaaaagaagtagctacaaaaaagtctcctgttaaagctacagcacccgaactt
aaaggagaagaagaaggagaaaaggaagaagaagaagaaggtgaagaggaggaggaagag
gaggaagaggaggaagatgaaggtgtaaaatcagaccaagctgaagaaggaggatctgag
aaggaaggttctagtgaaaaggaggaaggtgagcaggaagaagaggaggaagcagaagct
gaaggtaatggagaagaaactgaagctaaggatgaaaagaaagctgagaaaaagagtgaa
aaagtggcttcccccaaggaagagctggtggtagaagctaaagaggagaagccggcagag
aaagccaagtccccgatgcccaaatcaccggtggaagaggtgaagccaaaagcagatgct
ggagctggaaaaggtgaccagaaagaggaggaagtgaaagtagaggaagtgaagaaagaa
gcaaaggaaactcaaaaggaagagaagggagagaaaaaggaggagaagccaaaggatgtc
ccagagaagaagaaagcagaatcacccgttaaggaagaagtggtagaagaggtgctcacc
gtcaccaaatcaccaaaggtgagctcggagaaggatgccaaggaggaggagaagtcaccg
cagcaggaaaagggcaaggagaaagcggaagaggaaggagggagtgaggaggagggcagt
gaccaaggttccaaggaatccacaaaggaagacatagcagtcaatggggaggtggaaggg
aaggaggaggaagagcagactaaggagaagggcactgggggagaagaggagaaaggggtc
atcacgaatggcctagacttgagcccagcagatgacaagaagggggatgatagaagtgag
gataaagtggtggtgaccaagaagatagaaaaaatcaccagtgaggggggagatggtgct
accaaatacattaccaaatctgtaaccgtcactcaaaaggtggaagagcacgaagagagc
tttgaggagaaactagtgtctactaaaaaggtagagaaggtcacttcacatgccatagta
aaggaagtcacccaaagtgactag
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