KEGG   Sorex fumeus (smoky shrew): 130028608
Entry
130028608         CDS       T10594                                 
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
  KO
K04659  thrombospondin 2/3/4/5
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04145  Phagosome
sfum04151  PI3K-Akt signaling pathway
sfum04510  Focal adhesion
sfum04512  ECM-receptor interaction
sfum04820  Cytoskeleton in muscle cells
sfum05144  Malaria
sfum05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    130028608 (COMP)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130028608 (COMP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130028608 (COMP)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130028608 (COMP)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130028608 (COMP)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    130028608 (COMP)
  09174 Infectious disease: parasitic
   05144 Malaria
    130028608 (COMP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfum04131]
    130028608 (COMP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfum04147]
    130028608 (COMP)
   00536 Glycosaminoglycan binding proteins [BR:sfum00536]
    130028608 (COMP)
Membrane trafficking [BR:sfum04131]
 Endocytosis
  Phagocytosis
   Opsonins
    130028608 (COMP)
Exosome [BR:sfum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130028608 (COMP)
  Exosomal proteins of colorectal cancer cells
   130028608 (COMP)
  Exosomal proteins of bladder cancer cells
   130028608 (COMP)
Glycosaminoglycan binding proteins [BR:sfum00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130028608 (COMP)
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA EGF_3 COMP cEGF EGF_MSP1_1
Other DBs
NCBI-GeneID: 130028608
NCBI-ProteinID: XP_055975337
LinkDB
Position
Unknown
AA seq 757 aa
MGLAAACVLLLALAARGASAQGQMPLGADLAPQMLRQLQETNAALQDVRELLRQQVKEIT
FLKNTVMECDACGMQPAMTPGVSVRPLPGCAPGHCFPGVVCTQTASGARCGPCPEGFTGN
GSHCADVNECNAHPCFPRVRCINTSPGFRCESCPPGYSGATHEGVGLAFAKANKQVCTDI
NECETGQHNCIPNSVCLNTQGSFQCGQCQPGFVGDQESGCYRRGQRFCPDGTPSQCHEKA
DCVLERDGSRSCVCVVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCMTVPNSGQE
DVDRDGIGDACDPDADGDGIINEEDNCPLMRNPDQRNSDGDKWGDACDNCRAQKNDDQKD
TDSDGRGDACDDDIDGDRIRNSADNCPRVPNSDQKDSDGDGVGDACDNCPQKSNPDQRDV
DHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGQGDACDDDDDNDGIPDIS
DNCRLVPNPNQEDSNRVGVGDACHGDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQMEQTYWQASPFRAVAEPGIQLKAVKSSTGPGEHLRNALWHTGDTG
SQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGR
LGVFCFSQENIIWANLRYRCNDTIPEDYENQQQRLRA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgggtctcgccgccgcctgcgttctcctgctcgcgctggctgcgcggggcgcatccgcc
cagggccagatgccgctgggtgccgacctggccccgcagatgctccgacaacttcaggag
accaacgcggcgctgcaggacgtgcgggagctgctgaggcagcaggtcaaggaaatcacg
ttcctgaaaaacacggtgatggagtgcgacgcgtgcgggatgcagcccgcaatgacgccc
ggggtgagcgtgcgcccgctgcccggctgcgcgcccggccactgcttccccggcgtggtc
tgcacgcagacggccagcggcgcgcgctgcggcccctgccccgagggcttcaccggcaac
ggctcccactgcgctgatgtcaacgagtgcaacgctcacccgtgctttccccgcgtgcgc
tgcatcaataccagcccaggcttccgctgcgagtcttgcccgccagggtacagcggcgcc
acccacgagggcgtgggactggccttcgctaaggccaacaaacaggtctgcacggacatt
aacgagtgtgagacggggcagcacaactgcatccccaactccgtgtgcctcaacacccaa
ggctccttccagtgcggccaatgccagcctggctttgtgggcgaccaggagtcgggctgc
tatcggcgtgggcagcgcttctgtcccgacggcacgcccagccagtgccatgagaaggcc
gactgcgtcctggagcgcgacggctcccggtcgtgcgtgtgcgttgtcggctgggcaggc
aacgggcttctctgtggccgagacactgatctggacggtttcccggatgagaagctgcgc
tgctccgagaggcagtgccgcaaggacaattgcatgacagtgcccaactcagggcaggag
gacgtagatcgcgatggcatcggagatgcctgcgaccctgatgctgacggagatggaatc
atcaatgaggaggacaactgcccactgatgaggaacccagaccaacgcaattctgatggt
gacaaatggggtgatgcatgtgacaactgtcgggctcagaagaacgatgaccagaaggac
actgacagcgatggccgaggggatgcctgcgatgatgacatcgatggcgatcggattcga
aactcagcagacaactgtcccagggtgcctaactcagaccagaaagacagcgatggtgac
ggtgtaggggatgcgtgtgacaattgtccccagaagagcaacccagaccagagggatgtg
gaccacgacttcgtgggcgatgcatgtgacagcgatcaggaccaagatggggatgggcac
caggactcaagggacaactgcccgacggtacccaacagcgcccagcaggactcggaccat
gatggccagggtgatgcctgtgatgatgatgatgacaatgatgggatcccagacatcagc
gacaactgccgcttggtgcccaaccccaaccaggaggactcaaatagagttggtgtggga
gacgcgtgtcacggtgacttcgatgccgataaggtggttgacaagatcgatgtgtgtcct
gagaacgcagaggtcaccctcactgacttcagggccttccagacagtcgtgctagaccct
gagggcgacgcacagatagaccccaactgggtggtgctgaaccagggcatggaaattgtg
cagacaatgaatagtgatccaggcctggctgtgggctacacggccttcaatggcgtggac
ttcgaaggcacgttccatgtgaacacggtcacggacgacgactatgcaggcttcatcttt
ggctaccaggacagctccagcttctacgtggtcatgtggaagcagatggagcagacgtat
tggcaggccagccccttccgtgctgtggctgaaccgggcatccagctcaaggctgtgaag
tcgtccacaggccccggagagcacctccggaatgcgttgtggcatacaggggacacgggg
tcccaggtgcggctgctgtggaaggatcctcgcaatgtgggctggaaggacaagacttcc
taccgctggttcctgcagcaccggccccaagtgggctacatcagggtgcggttctatgag
ggcccagagctggtggcagacagcaacgtggtcctggatacgaccatgcggggcggccgc
ctgggagtcttctgcttctcccaggagaatatcatctgggctaacctgcgttaccgctgc
aatgacaccatcccggaggattatgaaaaccagcagcaacggctgcgggcctag

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