Sorex fumeus (smoky shrew): 130028664
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Entry
130028664 CDS
T10594
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfum03037
]
130028664 (CFAP54)
Cilium and associated proteins [BR:
sfum03037
]
Motile cilia and associated proteins
Sperm associated proteins
130028664 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
fn3
PqiA
Motif
Other DBs
NCBI-GeneID:
130028664
NCBI-ProteinID:
XP_055975453
LinkDB
All DBs
Position
Unknown
AA seq
3168 aa
AA seq
DB search
MAARGASQASPSFSSYSPDSPSGPLPPPSPSSAAASKSPLDSKASSSSSPPPAGSAPDVS
LPLAVFYGPLDAKNPLLASFQKEIRELLGFVKRKKALATTEEQKYEFQRRCATCLFNIWT
KYAPRLPADYYNENLLRVGNSLCEMKEYKLALLQCYGRYLQQFSADFDENKADVNQFKTV
FFPKGFGDKTAAQTFQALNGKNICSYQLICDSDVNLQNQDSMAHCLRILSSLRLLMQVAL
PQEHLCWIVFNGTIYIYTICRKLMVVGQSAKALEYLLWASICMESSVPLLSVRYLTWRAT
LYTAVCQCYYDSQAAIHGETFARRGLAKIDELRQLELMSSSQSQQESRSCYREATIKMAV
MIFKRGVFESRKKNKAYLRPKLRMNIKETQAFSWPSTLTERLLDEMFDSTASRFLAVLEA
LSDPNRRTLQTAPVATDEIEVRDIVTELFTAGRTLLLVSNTDKEGIFDFPVTSFLKLLIG
GKNVISLDAALKFAKFAFNYEEWSLFESSAGQILEFLQGRDEPESKKAEKDLILLVVVET
LINIKKNRGTILPLENYKEGLSAQDFVKKYVLHNTCMKTCTYSEDIFHLAAVLYSCVCNC
PQDIQPDKEIVVDMIMFLWQKCKFGIQRLNIPKNDYAKFTQKISSNKWIYLLWQINEVIQ
CYRMEDIDIVMVAEVTLRISEILEFLGNPQRRFKKSLEMGLRELGEEFLRTPKGSPEILP
ILKKKPIEQLFLAYTLLDKTINGINLHCMLTNLSNGSSAIDHCYTKYPHADGDIYKPVTT
NTFIMDLHLELIRAQHRIATLLLDKLNVLQIPEVSENVPTRAPEKLKQSKNPDCFTELTV
MNKIRKNKISKAIFLIQKALLIFEKDATCIFSQEFLMEAYSLIEKAEAEQNALYLCQKCL
ESSERKKKQVPPPPLLLSRTYCSVTLKPAPFTTNVKVSWYSILGCKAEGSFGKVRLNNNH
LPNSGEMIPADGKTVFEVKGLETNEKYIFAVAAYSSSGKLIGDSIGESTKPILIYPPLST
VTTRMYLTQAAYQIGEYDLAKKIFSPVWDYFVASPPHDEKSIVSLNNIMTVTQRRLYSDI
LADTSSTLLYLFLRNIFVISDIKVKEENLFCDNIKGNEISPAQNIARLVECERVLVALEL
SNYLNDSSFALQAVTQCYGLLAPLIFHNIVLVPVVQILIKCLVVLQALPDVLQSKKNAAS
FESMQHMVACCIYYLIKILRSWREYDLAVIIINYGKRMLDITPGYKLFSYSDREEVLEEV
IESKKILFGKSKKVQQPLVPEKINEQLVMLETHLLKLVKQVATCELSGAEDPIFLYPIVL
NWPVKGAAKEVLKFKHRPRFLEFFTQIMLKCLNDEKFHLVVELTNPVIDFLRRRNESLTG
MRRYRYKDNILSKKRHKSVKYKAVVMEIGRTDKIIRKRTKKRETLREFFSRNPNIFEMTE
QERNRRNDVRKVAQKFLISSLNPLILRYVKRKRFHQICIEELPWRAQMNLYLAMAYYNLF
LTKLAERIKGKCYSHTFFSFQSCDPDMFSLTNSGTVLPTRKLSLKYYEILLDFLLKSRKR
KANLPNDAEEFSAFINAKLNEENAAKPQNIHKIDSQVGLNYKEKDRGNMSILDNFTKIFL
FCRRAMVLAHRGGYWTLLQNCCRTFWNITQELQLFFKQTMNMSKIFPVNQDGFLCTIVLP
FYFGAELLIDMLLELQNVNAIKVMEEKEEFSVPSCYGNIRTDNGGSSLSFEQPLDDVNMV
DLKWIRDFVLKSLELLYQVEKWETLVSIAMQFNAISHERYTEQVTPLLVYAQHQLLLRMN
RLKGPDITQQACVRYEAEHGEKITYKNFIGKQFKIRPSIKKELSPATIKEVTQDFIYSEC
DMAKELVCVPVDVTDTLRYFRETLEKSRYHNRCIRHSRKLLSLFLAQLQGDKERASSPKV
NTGKVEFSLGTEDMHLPTPPDLSQEHFRVFSSVEKSKLPLSQLGLVISSYHKTIDVLETS
NQRSLKVQALHELGNLLIFAEKKRAALKCWSQALDDIFRKPDVLRTWKEFGPSPTSATNS
NSPPQFKDYSEEFLLKVDIWGCLQGAVISAKIAQFIETLDVSKRTNCCILSALLFQGLLR
TTLPHPKAERCYAQYEVTQLLPGVELFSDRYRADICTVIASLYYVIRELHFANHNLIILP
LLALYQYFVSVICQDLVRNLEARILKIEVLTDLRFFSEAFSEMMYIFYGKNMPSSIPAGY
KPFGRVKVFQSFDTGKSLYNKENAQALDELINKGMPPILTTIGQQHLLNKYSFVKAYFLI
NLAATINCIPECIAKSPPNPEKYKINTLSLKELIIKEEGSSALQLTKPKDDVILCAIKSV
LLTEAEDKLNSLLVELDHSSHKSLAQYSAGELEIVVEARLQLAAIALQRHRAAYSSAIVF
SILKLLQDSKLFKKKVSSEGRESFISTPTFHTEQKEDEFLDSITLHAREYFNIHLWLRCC
LALVTAFVAQVRGIGIITENDLTDVGSLINDVFMEAKNSDDKELQAEFLMQAVIIGLQEK
HLKTEIITKLQDIIQLLEGNAFISPRSYLTLVRSMLLMDDLTKAEKFQDASSKTDKLHLL
AQCHSILIEQMLVFGETIEFPVSNTDYASPIQPLKNIYLPHIMLLAKTKMRIGHTMAKQV
CQSSKKKESSRWLPSLHILQIALKLCKISITEEHEVEAEILFQKGKIERQMFMEDKSSPS
KFESLFEAIQLSLKNDQNSGLIRDSYLEMAILFLHLLKPKNKLSVSPSAFVAPVRRHSSL
KDQLGNRLEMYSSLAWIAIRAASQVSKAVLAVNQHFGKNNSRIDKVSQDTIPTIPEFASM
DLFSSYTDYLHGNHQVVFQTGGNQSVFYQSDDWSDNTDTSKKTETKVDVTWILLLRYYIH
LQRTNNMSKLLASLKSETGNFVPVDSLFTSLFNSALILRQKEMHCFLKKFLHLYSSSCID
EFPRELLQDWENLPSSDKNLFESSGKAYRNARCFSLVVYEPFVPGVDKTVVSIDMATQAL
NKELCFQWYIPPLERPPRDTEPMVLLLYAYNLKPMKISDVRCSTYNNASVGSLWVPLNRV
ISIHEELSNLTQIAEISLPTSSEIISDEEEPEKEMDRLVDKDIELMVLECCSNILSLLLN
EKDSSPLSKVPFVISLKSILDLERLFDLANGGVISEGSLFQWLLSLVS
NT seq
9507 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggcgcttcgcaggcgtccccctcgttctcttcttactccccggactcg
ccgtccggtccgctgccgcccccatccccgtcctcggccgcggcctccaagtcgcccctg
gactccaaggcgagctcttcgagctcaccgccgcccgcgggaagcgccccggacgtgtcg
ttgcccctcgcggtgttttacggtccgctcgatgcgaagaacccgctcctggcctctttt
cagaaggagatccgggagttgctaggctttgtgaagagaaaaaaagctttagcgaccacc
gaggaacagaagtacgagttccagcggcgctgtgctacctgtttgtttaatatctggacc
aaatacgcccctcggttgccggctgactattacaatgaaaaccttctaagagttggaaat
agcctttgtgaaatgaaagaatataaattggcccttttacagtgctatgggagatacctt
cagcagttcagtgctgactttgatgagaataaagcagatgtgaatcaattcaagactgtc
ttttttccaaaaggctttggagataaaactgcggcacaaacatttcaagctttaaatggc
aaaaatatttgcagctaccagcttatctgtgacagtgatgtgaacctgcagaaccaggat
tccatggcccattgtctgcggatcttgtcttctcttcgactcctcatgcaagtggctctt
ccccaggagcacctctgctggattgttttcaatggtactatttacatttacacgatttgc
agaaaactgatggtcgtaggccagtctgccaaggctttagaatatctcctgtgggctagt
atatgtatggagtcctctgtcccactcctctctgtcaggtatttgacatggagagctact
ctttacactgcggtctgccagtgctactatgatagccaagctgctattcatggagagaca
tttgctcggcgtggtttagctaaaatcgatgagttaaggcaactggaattaatgagttct
tcacaatcacagcaagaatccagaagctgttatagagaggccacgataaagatggcagtg
atgatcttcaaaagaggagtatttgaatctagaaagaaaaacaaagcttacttaagacca
aaattaagaatgaacataaaggaaacacaagccttttcatggccatctactctcaccgaa
cgtctgttggatgagatgtttgacagcactgcatcccgctttctggctgtcttggaagct
ctttctgatccaaatagacgaacactacaaactgcaccagttgctacagatgaaatagaa
gtccgtgatattgtcacagagctattcacagcaggaagaacgcttttattagtatcaaat
actgacaaagaaggaatctttgattttcctgtgacatcctttttgaagctacttataggg
ggaaaaaatgttatttctctggacgcagccttgaaatttgcaaaatttgcttttaactat
gaggaatggagtttgtttgaatcttcagctgggcagattcttgaatttctccaggggcgg
gatgagccagagtcaaagaaagcagagaaggatttaattcttcttgttgtagtagaaact
ctaatcaatataaagaaaaacagaggtacaatcctgcctttggagaactacaaagaaggc
ctgtcagctcaagattttgtaaaaaaatatgttttgcataatacctgcatgaagacttgt
acatattcagaagacattttccatctagcagcagtgttgtattcctgtgtttgtaactgt
ccccaggatattcagcctgataaagaaatcgttgtggacatgataatgttcctctggcag
aaatgcaaatttggaattcaacggctcaatataccaaaaaacgactatgcaaaattcacc
cagaaaatcagttctaataaatggatttatcttctgtggcagatcaatgaagtaattcaa
tgctacagaatggaggacattgacatcgtgatggtggcagaagtcacattacggattagt
gaaatattggagtttttaggaaacccccaaagaaggtttaaaaagtctctagaaatgggc
cttagagaactgggagaggaattccttaggactccaaaagggagtccagaaattcttcca
atattaaagaaaaaacccatagaacaattatttttggcttatacacttcttgacaaaaca
attaatggaataaatttacattgcatgttaactaacctgtccaatggatcatcagcaatt
gaccactgctataccaagtacccccatgctgatggagacatttacaaaccagttacaaca
aatactttcattatggatttgcatcttgaactaattcgagctcagcatcgaatagccact
ttgctccttgataaattgaatgttttacagattccagaagttagcgaaaacgtacctacc
agagctccagagaagctaaaacaatccaaaaaccctgattgttttacagaattaactgta
atgaataaaataaggaagaataagatatccaaagcaattttcttgattcagaaagctctt
ttaatatttgagaaagatgcaacttgcatattttcacaagaatttttaatggaagcatat
tctttaattgagaaagctgaagcagaacaaaatgccctatatttatgtcagaaatgtttg
gaaagttctgaaagaaaaaagaaacaagtccctcctccacctctcctgttgtcccgaact
tattgttctgtgaccttgaaacctgctccatttactacaaatgtcaaggtctcctggtac
tccattttgggttgcaaagcagaagggagctttgggaaagttaggttaaacaataaccac
cttccaaactcaggagaaatgataccagctgatggtaaaaccgtttttgaggtgaaagga
ttagaaaccaatgaaaaatatatatttgcagttgctgcctattcttctagtgggaagctc
attggtgattctattggggagtcaacgaaaccaattctgatttatccacctctttccact
gttactacccgaatgtacttgacacaggcagcctatcagattggtgaatatgacttggct
aagaaaattttttcaccagtgtgggactattttgttgcttcaccacctcatgatgagaaa
tctattgtttctttaaacaatataatgactgttacacagagaagattatattcagacatt
ttggcggatacatcttcaaccctattgtacctttttcttagaaacatttttgtaataagt
gacattaaagttaaagaagagaatcttttctgtgataatattaaaggcaatgagatttcc
cctgctcaaaatattgctagattggttgaatgtgaaagagtattagtggctttggaactt
agcaactacctaaatgattccagttttgcccttcaagctgtgactcagtgttatggtctc
cttgctcctctaatctttcataatattgttctggtgcctgttgtacagatcttaataaag
tgtttggtggttttgcaagcacttccagatgtcctccaatcaaagaaaaacgctgcaagt
tttgaaagcatgcagcatatggtagcttgttgtatctactacttaataaagattctacgc
tcgtggagggaatatgacctcgcagtaatcattataaattatgggaaacggatgttggac
atcacaccaggatacaaattatttagttatagtgaccgagaagaagtcttggaggaggta
attgagtctaagaagattttgtttggcaagtccaagaaggtgcagcagccgttagtacct
gaaaagataaatgaacagttggttatgttggagacccacctactcaaactggtgaagcaa
gttgctacatgtgaactctctggagcagaggaccccatctttctttaccctatagtttta
aattggccagtcaaaggtgctgcaaaagaagtcctgaaatttaaacacagacccagattc
ctggaattctttacacaaattatgctaaaatgcttgaatgatgaaaaatttcatctcgtg
gtggaactaacgaatcccgtcattgatttcttgagaaggaggaatgaaagtttaactgga
atgagaagatacagatataaggacaatattttgagtaaaaagaggcacaaatctgtgaaa
tataaagctgtggtaatggaaattggaagaacagataagattataagaaaaagaactaag
aaaagggaaacactaagagaatttttttccaggaatccaaatatttttgaaatgacggaa
caagaaagaaataggagaaatgatgttagaaaagtagcacaaaaattcctgataagtagc
ttgaatcctttaatactgaggtacgttaagagaaagaggttccatcaaatatgtattgag
gaacttccctggagagctcagatgaacctatatctggcaatggcatactacaacttgttt
ttgacaaaactggcagagcggataaagggaaaatgctattcacatacatttttcagtttc
caatcctgcgatcctgatatgttctcactaactaattcaggaacagtattaccaacacgc
aaattgtctttgaaatactatgaaatcttgcttgattttcttctgaaatctagaaaaagg
aaggccaatttaccaaatgatgcagaggaattttcagcatttattaatgcaaaattgaat
gaggaaaatgccgccaagccacaaaacattcacaaaattgactctcaagtgggcttgaat
tacaaggagaaagaccgagggaatatgagtatactggataactttacaaaaatcttttta
ttttgcaggagagctatggttcttgctcatcgaggtggctattggacactgcttcagaac
tgctgccggaccttttggaacatcactcaggagttacagttgttttttaaacagaccatg
aatatgtctaaaatatttcctgttaaccaggatggtttcctctgcaccattgttttgcct
ttctattttggagcagaattacttattgacatgctactagagttacagaatgttaatgct
attaaggttatggaagaaaaggaagagttcagtgttcccagctgctatggaaatattagg
actgataatggtggttctagcctttcgtttgagcaacctctggatgatgtgaatatggtt
gacttgaaatggatccgcgactttgtattaaaatctctggaacttttgtatcaagtggaa
aaatgggaaacattagtatcaattgccatgcagttcaatgccatttcacatgagagatac
acagaacaagtgacaccactcttggtgtatgcacagcaccagcttctcctaagaatgaac
aggttgaaaggcccagatattacccaacaagcttgtgtgagatatgaagctgaacatgga
gagaagataacttacaagaatttcattggaaagcaatttaagattaggccttcaatcaag
aaagagttatcgccagcaaccatcaaagaagttacacaagattttatctattcagaatgc
gacatggccaaagaacttgtctgcgtgcctgtggatgtgacagacactttgagatatttc
cgagagaccttggagaaatccagatatcacaacagatgcattcgacacagcagaaagttg
ctttcattatttcttgcccagttacaaggtgacaaagaaagagcaagctctcccaaagtc
aatactggcaaggtggaattttccctggggacagaagacatgcatttgccaacacccccg
gacctttctcaagagcacttcagagttttcagttctgtggagaaaagcaaacttcccctt
tcccagctcgggcttgtgatttcttcctaccataaaaccatagatgttctcgaaaccagc
aatcaaaggagtcttaaagttcaggcattgcatgaacttggaaatcttctcatctttgct
gaaaagaaaagagctgctttaaaatgttggtctcaagctcttgatgacatattcagaaaa
ccagatgtgttacgtacatggaaagaatttggcccctcacccaccagtgccaccaatagc
aactctcctccgcagttcaaagactacagtgaagaatttctgttaaaagttgacatttgg
ggatgtttacaaggagcagtgatatcagcaaagatagcacagtttattgagacattggat
gtgagtaaaagaaccaactgctgcattttgtctgcattactctttcagggtttgcttaga
accacacttccacaccccaaagctgaacgttgctatgctcagtatgaagtcactcagctt
cttccaggcgttgaacttttctcagatagatacagggctgatatttgcaccgtgattgca
agtctctattatgtaatccgtgagctgcactttgctaaccataacctcataattctgcct
ctccttgcattgtaccagtattttgtttctgtaatttgtcaagatttagtcagaaatcta
gaagcaagaatcctcaagatagaagttcttacagatttaagattcttttctgaagccttt
tctgagatgatgtatattttttatggaaaaaatatgccctcctccatacctgctggatat
aaaccctttggaagagtgaaggtatttcaatcatttgatacaggaaaatctctttataat
aaagaaaatgcacaggcacttgatgaattaataaataaaggcatgcctccaattctgact
accattggccaacaacatctcttaaataagtattcttttgtcaaggcatactttttaata
aatttggctgcaacaataaactgtatcccagaatgtatagcaaaaagtccaccgaatcct
gagaagtacaaaataaatacactgagcttgaaagagttaattataaaagaagaaggaagt
tcagctttacagcttacaaagccaaaagatgatgtgatactttgtgcaataaagtcggtc
ttactgacagaggctgaagataagctaaacagccttttagtagagttggatcattcatca
cacaagagcctcgcccagtactcagcaggtgagctggagattgtggtggaggcccggctc
cagctagctgcaattgccttgcagagacaccgcgcagcctacagttctgcaatagtattt
tccatacttaaacttcttcaggattccaaactttttaaaaagaaggtatcatcagaaggg
agagaaagcttcatctctacaccaactttccacactgaacagaaagaagatgaattttta
gattctattaccctacatgctcgagagtattttaatattcatttgtggctgaggtgctgt
ctggccttggtgactgcatttgtggcgcaagttcgtggaattggcataataacagagaat
gatttgactgatgtggggagcctcatcaatgatgtgtttatggaggccaagaattcagat
gacaaggagctccaggcggaattcttgatgcaagctgtaatcattggtctacaagaaaag
catttaaagacagagatcataacaaaacttcaggatataatacagttgcttgaaggaaat
gcgtttatttctcctcgatcttatttaaccctggtgagaagcatgcttttgatggatgac
ctaacaaaagctgagaaattccaggatgcctcttcaaaaacagacaaactacacttattg
gctcagtgccatagcattctcattgaacagatgctagttttcggagagacgattgaattt
cctgtatcaaacactgactatgcaagtcctatccaaccattaaaaaatatctatcttcca
catatcatgttgttggccaaaacaaaaatgagaattggacataccatggccaagcaagta
tgccaaagtagtaagaagaaggagtcctctaggtggttaccttctcttcatattcttcaa
atagcactgaaactctgtaaaatatcaataacagaagagcatgaggtagaagctgagatc
ctttttcagaaaggcaaaatagaacgtcaaatgtttatggaagacaaatcatcaccttca
aagtttgagagtttatttgaagctatacaactcagcttgaaaaatgatcaaaactcaggg
ttgatacgagactcctacctagagatggccatattgtttttgcacttactgaagccaaag
aacaagctttcagtgtcaccatcagcatttgtggctcctgtcagaagacatagttctttg
aaagatcagttgggaaataggctagaaatgtacagctcattggcctggattgcaataaga
gctgcttcccaggtcagtaaagctgtgctggcagttaaccaacatttcggaaagaataat
tctagaattgataaagttagtcaagacacaataccaaccatcccagagtttgcctcgatg
gatcttttctcttcctacacagattatttgcatggtaaccaccaagtagtcttccagact
ggaggtaaccaaagtgttttctaccaaagtgatgactggagtgacaacacagatacatca
aaaaagactgagaccaaagtggatgttacttggattcttctgttgcgctactacattcac
ctgcagagaactaacaatatgagcaaattgctagcatctttaaaatcagaaaccgggaat
tttgtgccggtcgacagtctcttcacatcccttttcaactctgcattgattttgcggcaa
aaagaaatgcattgtttccttaaaaaatttttacacttgtattcttcctcttgtattgat
gaatttccaagagaattacttcaagattgggaaaatttaccttcttcagataagaactta
tttgagtcatcaggcaaggcttatagaaacgccagatgcttctctctggtagtttatgaa
ccttttgtgcctggcgttgataaaacagtggtatcaatagatatggcaacacaagctcta
aacaaagaactttgttttcaatggtacattcctccactggagagacccccaagggatacg
gaacctatggttttattgttgtatgcatataatttaaagcccatgaagatttcagatgtg
aggtgttccacttataacaatgcatctgttggctctctctgggttccactgaacagagtt
atttcaattcatgaggagctatctaatcttacacaaattgctgaaatttccttgccaaca
agctctgaaattatttcagatgaagaggaacctgagaaagaaatggatagattagttgat
aaagatatagaactcatggttcttgaatgttgctctaatattttaagcctgcttttgaat
gagaaagactcatcaccactatcaaaggtcccatttgtcatctcactgaaatctatattg
gatcttgagagactttttgatcttgctaatggaggtgtcatatcagaaggaagcctgttc
cagtggctattgtcccttgtttcctga
DBGET
integrated database retrieval system
