Sorex fumeus (smoky shrew): 130028717
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Entry
130028717 CDS
T10594
Symbol
LSS
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00100
Steroid biosynthesis
sfum01100
Metabolic pathways
Module
sfum_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
130028717 (LSS)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
130028717 (LSS)
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Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
TED_complement
Motif
Other DBs
NCBI-GeneID:
130028717
NCBI-ProteinID:
XP_055975522
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All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTDGTCLRRRGGPYPTPPATDLGRWRLECEMGRQTWTYLQEDGEASRAQTALEAHSLGMD
TRSYFKDLPKAHTAWEGALNGMVFYKELQAEDGHWTGDYGGPLFLLPGLLITCHVARIPL
PAGYKEEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGIGPDDPDLVRARNI
LHEKGGAVFIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPSWAPAHPSTLWCHCRQVYLP
MSYCYATRLSAEEDSLVQSLRQELYVEDYASINWSAHRNSVAPDDLYTPHSWLLRVVYAL
LNLYERHHSTSLRHRAIQKLYEHISADDRFTKCISIGPISKTINMLVRWYVDGPSSPAFQ
EHISRIPDYLWLGLDGMKMQGTNGSQIWDTSFAIQALLEASAELRPEFSSCLQKAHEFLR
TSQVPDNPPDYQKYYRQMNKGGFSFSTLDCGWIVADCTAEALKAILLLQEKCPFITKHVP
RERLCDAVAVLLNMRNSDGGFATYETKRGGLLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHTQFPDHRAEEIRETLKQGLAYCRQVQRPDGSWEGSWGVCFTYGTWFGLEAFACM
GQIYCDGVASAEVTRACDFLLSKQMADGGWGEDFESCEQRRYVQSAQSQIHNTCWALMGL
MAVRYPDVAVLERGVRCLLGKQLPSGDWPQENISGVFNKSCAISYTNYRNVFPIWTLGRF
SRLHPESVLAGHP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggcacgtgtctgcgccgcagaggggggccctaccccacgccgcccgccacc
gacctcgggcgctggcgcctggagtgtgagatgggccggcagacatggacctacctgcag
gaggacggagaggccagccgcgcgcagacggcgctggaagcccactcgctggggatggac
accaggagttactttaaggacttgcccaaagcccacacagcctgggagggcgccctgaat
gggatggtgttctacaaggagttgcaggccgaggatgggcactggactggcgactatgga
ggcccactcttcctcctcccaggcctcttgatcacatgccatgtggcacgcattcctctg
cctgctggatacaaagaagagatggtgcgatacctgcgctcagtgcagctacctgatggc
ggctggggcctgcacattgaggacaagtctacagtgtttgggactgcgctgaactatgtg
tctctgagaattctgggtattgggcctgatgatcctgacttggtacgagcccggaacatt
cttcatgagaaaggtggtgctgttttcatcccttcttgggggaaattctggctggctgtc
ctgaatgtttacagctgggaaggcctcaacaccctgtttccagagatgtggctgtttccc
tcctgggcgcccgcacacccttcgacactctggtgccattgccggcaggtctacctgcca
atgagctactgctatgccactcggctgagcgctgaggaggactcactggtccagagcctt
cgccaggagctgtatgtggaggactacgccagcatcaattggtcagcacacaggaacagc
gtggcccctgatgacctgtacacaccacacagttggctgctccgtgtagtgtacgccctc
ctcaacctctatgagcgccaccacagcaccagcctgcggcaccgggccatccagaagctg
tacgagcacatctcagccgacgaccgattcaccaagtgcattagcattgggccgatctca
aaaactatcaacatgcttgttcgctggtatgtggatgggccctcctctcctgctttccag
gaacacatctccaggattcctgattacctctggctgggcctcgatggcatgaaaatgcag
ggcaccaacggttcacagatctgggatacctcatttgccattcaggcactactggaggcc
agtgcagaactcaggcctgagttctcatcctgcctgcagaaggcacatgagtttctccgg
acctcacaggtcccagacaatcctcctgactaccagaagtactaccgccagatgaataag
ggcggcttctccttcagcactctggattgcggctggattgttgctgattgcaccgctgag
gccttgaaggccatccttctcctgcaggaaaagtgtccctttatcaccaagcatgttccc
cgagagcggctctgtgatgctgtggctgtgttgctgaacatgagaaattccgacggaggg
tttgccacctatgaaaccaagcgcggagggctcttgctggagctgctgaacccctcagag
gtctttggggatatcatgattgactacacgtatgtggagtgcacctcggctgtgatgcag
gcactgaagcattttcatactcagtttccagaccacagggccgaggagatcagagagacc
ctcaagcaaggcctggcatactgccggcaggtacagaggcctgacggctcctgggaaggc
tcatggggggtctgcttcacctatggcacctggtttggcctggaagcatttgcctgcatg
gggcagatctattgtgatggggtagccagtgcagaagtcacccgggcctgtgacttcctg
ctctccaagcagatggcagacggtggctggggggaggacttcgagtcctgtgagcagcgt
cgctatgtacagagcgcccagtcccagatccataacacctgctgggccctgatggggctg
atggctgtgaggtatcctgatgtagcagtcctggagagaggagtcagatgtctgcttggc
aagcagctccccagtggcgactggcctcaggaaaatatctctggggtcttcaacaagtcc
tgtgccatcagctacacaaactacaggaatgtcttccccatctggactcttggccgcttc
tcacgcctgcatcctgagagtgtccttgctggtcacccctga
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