Sorex fumeus (smoky shrew): 130028923
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Entry
130028923 CDS
T10594
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
130028923 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130028923
NCBI-ProteinID:
XP_055975734
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MSLGHLSPGTRRRLLQGQAGPLPEPPASSVSIFLSSNGSDMDAEREALHSSACPEVQTFC
QKHGLMFEVVDLHWGVRSSEASAHMSPELCLEELERCQRTSLGPAFVALLGNQYGPCPLP
TLIEEKEWEVLRAQLTSRPGDLELVCRRFRKDENAVPPAFLLQTPGASEARSPEEPSVGS
VLRTAAQDALRLGLLSQEQCSRYHRSVMAWEMERGVLGPAGEQGATVFLREVQDLQRHIL
DDCALWLVDRLADGCLDTDAQRLLGDLKGRLTDTRPEALKAHQLPWSRDLVNPKNKAHGR
YLKELGEQFVARANHQVLERLREQEAAARPEPSWLFTEIRHHLALGAQATRVFCGRQDLL
ALLGQWLRQNHDGPHPPLLLWGPPGVGKTALLCRLAEQMPALLGRKTVTVLRLLGASGMS
TDAGGLLRGLCCQVCLAYGLPPPPGQVLAARARLVPFFHTLLHTVSSRHFESLVILLDSL
DDVDGGRWGRRVLWLPTQCPPRVHLILSACSGPRGALDAARRALPTAAEWEVPPLPAGQA
QELVQRLLAAARRSLSPGQRDLLWASLPECGHPGRLQLAFEEARRWASFTVPAPLAATAE
EATHQLCARLEQTHGRLLVASVLGYLAASRHGLSEAELKDILSLDDEVLQAVYRDWTPPS
RELLRFPPLLWVRLRRDLGHCLAQRPVDGFTLLGIAQRQLAEVVQARYLSGPEAAKRHGV
LADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAAQPLWFSDSVANVRKLQELPLHLLRAG
RVQELKQEVLGSMNWISCRGVSGGLEALLDDFALCGPHVDCAEVDLVREALQLCRPAVEL
RGLDKCLLYTELLARLLYFSASHPALVGPLCQQAQSWFRQCPHPVLVPLAGFLQPPGGPL
LAILTGCHKGISAIAWSLEKQLLLVGTQDGTVAVWDTEEWQTVHVLTGHTGEVKGLEVLA
QGTLVISASRDHTLRLWDLQAGQEKFTIWDGGSQEPSEPQSWSLHVDGPGKVLYSVSSYK
VNAWHLETAELVFRILGDAGDPWMCAAILPAQAVLLTVSAGCMVSLWSSVTGKRQGKRPM
TSITDEVPTCGVPVQKRGTMVVGFSQGALCLVSSEEDRLLDTLSAAVGLLVASEDDSLLA
AGFGKSVRVFLADSQGFHRFMASDLEHEDTVSAAAFGLQNNLLVTGSQDTLIQVWSLSEQ
GALLAVLEGVGAPVSLLAAGGTLVASASQQSSSLKVWDLSRTQQQGPCVPFPDRTGLTAV
SHNGAFVYFPKIGDRNKVSIWDLAEGQEQDAVDTSNEVCCLEVAEQAQLLLAGLVSGVVL
VFPLRSRQDVLCIPPPEARRAVRCVALSKDERRLAVAYDHTVLVLDVSPGEPCPVIDGPI
YTFYTQLPETLARAAVLADCRVLYGMSDGSLYVYECAGARVSQLEAHAGRVTCLEVSHRE
QLAVSGSEESRLCLWDLQACKWKLELSYTSSFCRGVQCACFSRDDKHVFAGLKDRSVIVW
SVQDGTLLAVQFVHAVVNRIIPTSNGFVAPTRHGHLIRQRFQCPAARVSQQDPLKNFKKA
VWMVKCRQREELAAGEEAPQDAEGLREDEAKCHRRSQVCLLL
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggggcacctcagcccaggcacccgccggcggctcctacagggccaggctggg
cccctgccagagcccccggccagcagcgtgtccatctttctcagctccaacggctcggac
atggacgccgagagagaggccctgcacagtagcgcctgccctgaggtgcagaccttctgc
cagaagcacgggctgatgtttgaggtggtggacttgcactggggcgtccggagcagcgag
gcttctgcacacatgagccctgagttgtgtctggaggagctcgagcgctgccagaggaca
tcgctgggcccagcgtttgtggcgctgctggggaaccagtatgggccctgcccgctgccc
actctcattgaggagaaggagtgggaggtgctgagagcccagttgaccagcaggcccggc
gacctggagctggtgtgtcggcgcttccgtaaggacgagaacgcagtgccgccagccttc
ctgctgcagacgcctggcgcgtctgaggcccgcagccccgaggagcccagcgtgggctcc
gtgctgcgcacagcggcccaggacgccctccggctgggcctcctgtcccaggagcagtgc
agccgctaccaccgctcagtcatggcatgggaaatggagcgcggcgtgctgggccccgcg
ggcgagcaaggcgccaccgttttcctgcgggaggtccaggacctgcagcgccacatcctg
gacgactgtgccctgtggctggtggaccggctggcggacggctgcctggacacagatgca
cagcgcctgctgggcgacctcaagggcaggctgaccgacacgcgccccgaggccctcaag
gcccaccagctgccctggagccgcgacctggtgaacccgaagaacaaggcccacgggcgc
tacctgaaggagctgggggagcagtttgtggccagggccaaccaccaggtgctggagagg
ctgcgggagcaggaggcggcggccaggcctgagccctcgtggcttttcaccgagatccgc
caccacctggccctgggcgcccaggccacccgcgtcttctgcggccgccaggacctactg
gcgctgctgggccagtggctgcggcagaaccacgacggcccgcacccgccgctgctgctc
tgggggcccccgggcgtgggcaagacggcgctgctgtgccgcctggccgagcagatgccc
gcgctgctgggccggaagacggtgacggtgctgcggctgctgggcgccagcgggatgagc
acggacgccggcgggctgctgcgcgggctctgctgccaggtgtgtctggcctacgggctc
ccgccgccgcccggccaggtgctggcggcccgcgcgcgcctcgtgcccttcttccacacg
ctcctgcacaccgtgtccagccgccacttcgagtccctcgtcatcctgctggactcgctg
gatgacgtggacggcgggcgctggggccggcgggtgctctggctgcccactcagtgcccc
ccgcgcgtccacctcatcctctcggcctgctccgggccgcggggggctctggatgccgcg
cgccgcgcgctcccgacggctgccgagtgggaggtgccgccgctgcccgcgggccaggcg
caggagctggtgcagcggctgctggcggctgctcggcgctcactgagccccgggcagcga
gacctactgtgggccagcctgcccgaatgcggccaccccgggcggctgcagctggccttc
gaggaggcacgccggtgggcctcgttcaccgtgcccgcacccctggctgccacagccgag
gaggccacacaccagctgtgtgcgcgcctggaacagacccatggacggctgctggtggcc
agtgtgctgggctacctcgcagcttcccggcacgggctgtctgaggcggaactgaaggac
atcttgtccctggatgatgaggtgctgcaggccgtgtaccgggactggacaccacccagc
cgggagctgctgcgcttccccccgctgctgtgggtgaggctgcggcgggacctgggccac
tgcctggcacagcggcccgtggatggcttcacgctcctgggcatcgcccagaggcagttg
gctgaggtggtccaagcacgctacctgtcgggacccgaggccgccaagaggcatggggta
ctggccgacttcttctcgggagcgtggagtcagggcaccaagaagctcatcacgctgccg
ctggtggggaagcccctcaacctggaccgcaaggtggccgcgcaaccgctgtggttctcg
gactcggtggccaacgtgcggaagttgcaggagctgccgctgcacctgctgcgtgccggc
cgcgtccaggagctgaagcaggaggttctgggcagcatgaactggatttcctgcaggggc
gtctctggggggctggaggccctgctggatgactttgccttgtgcggcccccacgtggac
tgcgctgaggtggacctggtgcgtgaggccctccagctgtgccgccctgccgtggagctg
cgcggcttggacaagtgtctcctgtacacggagctcctggcccggctgctctacttctca
gccagtcaccccgcactggtggggccactgtgccagcaggctcagagctggttccggcaa
tgtccacaccccgtgctggtgccccttgccggcttcctccagccccctggaggacccctg
ctggccattctcactggctgtcataagggcatcagcgccatcgcgtggagtctagagaag
cagctgctgctggtgggcacccaggatggcacggtagccgtgtgggacacggaggagtgg
cagacagtccacgtcctaactggacacacaggcgaggtgaaaggcttggaggtgctggcc
cagggcacgctcgtcatctccgcatccagggaccacacgctccgcctctgggacctgcag
gcggggcaggagaagttcaccatctgggacggaggctcccaggagccctctgagccgcag
tcctggagcctgcatgtggacgggcctgggaaggtgctgtactcagtgtccagctacaag
gtcaatgcctggcacctggagacggctgagctggtcttccgcattctgggggatgctggg
gacccctggatgtgcgcggccatcctgcccgcccaggccgtgctgctgaccgtgtctgcg
ggctgcatggtcagcctgtggagctcggtcactgggaagcggcagggcaagcggccaatg
accagcatcacggacgaggtgcccacatgtggggttccagtgcagaaacgggggacaatg
gtcgtcgggttcagccaaggtgccctgtgcctggtctcctctgaggaggacaggctgctg
gacacgctctcagcagcagtggggctcctggtggcttctgaggatgactcccttctcgct
gcagggtttggaaagtctgtgcgtgtcttcctggcggactcccagggcttccaccggttc
atggccagtgacctggagcacgaggacacggtcagcgcagctgcctttgggctccagaac
aacctgctggtcacggggtcccaggacacactcattcaggtgtggagcctgtccgagcag
ggtgctctgctggcggtactggagggtgtcggggcccccgtgagcctgctggccgcaggc
gggacactggtggcctccgcgtcacagcagtcctcatccctgaaagtgtgggacctcagc
cgcacacagcagcaggggccctgcgtgccattcccggacaggacagggcttacggccgtg
tcccacaacggggccttcgtctatttccccaaaatcggggacaggaacaaggtgtccatc
tgggacctggcggaaggccaggagcaggacgccgtggacacgtccaacgaggtgtgctgc
ctggaagtggcagagcaggcgcagctgctgctggcggggctggtgtcgggcgtggtgctg
gtgttcccgctgcgctcacgccaggacgtgttgtgcatccccccgcccgaggcccggcgc
gccgtgcgctgcgtggccctgagcaaggacgagcggcgcctggccgtcgcctacgaccac
acggtcctggtgctggacgtgagtccgggcgagccctgcccggtcattgacggccccatc
tacaccttctacacgcagctgcccgagacgctggcccgcgcggccgtcttggcagactgc
cgcgtgctctatggcatgagtgacggcagcctgtacgtgtacgagtgcgcgggcgccagg
gtgtcccaactcgaggcgcacgccggccgtgtcacctgcctggaggtcagccaccgggag
cagctggcggtcagcgggtcggaggagtcgcggctgtgtctgtgggacctgcaggcctgc
aagtggaagctggagctcagttacacgagctccttctgcaggggcgtgcagtgcgcctgc
ttctcccgggatgacaagcacgtgttcgccggcctcaaggaccgctcggtgatcgtctgg
agcgtgcaggacggcaccctgctggccgtgcagttcgtccatgcggtggtgaaccgcatt
atccccacttccaacggctttgtggcacccacccgccacggccacctcatccgccagcgc
ttccagtgccctgcggcccgtgtctcgcagcaggacccgctcaagaacttcaagaaggcc
gtgtggatggtcaagtgcaggcagcgggaggagctggccgccggcgaggaggccccacag
gacgcggagggcctccgggaggatgaagccaagtgccaccgccgctcacaggtgtgcctg
ctgctgtga
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