Sorex fumeus (smoky shrew): 130028957 Help Entry 130028957         CDS       T10594                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum01524   Platinum drug resistance sfum03430   Mismatch repair sfum05200   Pathways in cancer sfum05210   Colorectal cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     130028957 (MSH6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     130028957 (MSH6)   09162 Cancer: specific types    05210 Colorectal cancer     130028957 (MSH6)   09176 Drug resistance: antineoplastic    01524 Platinum drug resistance     130028957 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sfum03400]     130028957 (MSH6) DNA repair and recombination proteins [BR:sfum03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      130028957 (MSH6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV PWWP MutS_II Motif Other DBs NCBI-GeneID:  130028957 NCBI-ProteinID:  XP_055975794 LinkDB All DBs Position Unknown AA seq 1279 aa AA seqDB search MEGYPWWPCLVYNHPFDGTFIREKGKKSKSIRIHVQFFDDSPTRGWVSKRMLKPYTGSKS KEAQKGGHFYSAKPEILRAMQRADEALTKDKTKRLELAVCDEPSEPEEEEEMEVWPVANT SSLRDENAREGVGATYASDKSEDNEMESDEEVLPKVQGSRRSSRQVKKLRVISDSESDVG GSDVEFKPDTKEEGSSDEMSSGAGESDSEGLDSPIKVAPKRKRTGTGNGSIKRKSSKKEI PSAAKRAPGLSPETKNTLSGFSAPHSSESQAPVGGVCDDSRSLWYHETLEWLKQDKRRDV HRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDAL IGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAH ISKHDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSIKEKEEDSSGHSRVYGVCFV DASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKTILKVLLSSSLQEGL VPGSQFWDAAKTLRTLLEEGYFTEKLGKDSGVMLPEVLKGMTSESDVIGLTPGEKSELAL SALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDVISATKPGALFAKTNQRMVLDAVTLS NLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMDV PDKVSEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSA LEGFKIVCKIIGIMEDTVGDFKSKILKQIITLQTKNPKGSFPDLTIELNRWDTAFDHEKA RRTGLITPKAGFDADYDQALADIRENEQSLLEYLEKQRSRIGCRSIVYWGIGRNRYQLEI PESFTNRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFD KNYKDWQSAVECIAVLDVLLCLANHSHGADGPMCRPVIVLPEEHTPPFLELRGARHPCIT KTFFGDDFIPNDILIGCEEEDESGKAFCVLVTGPNMGGKSTLMRQAGLLAVMAQLGCYVP AEVCRLTPIDRIFTRLGASDRIMSGESTFFVELSETASILTHATSHSLVLVDELGRGTAT FDGTAIANAVVRELAENIKCRTLFSTHYHSLVGDYSQNVAVRLGHMACMVENECEDPSQE TITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLFREVCLVSE RSTVDAEAIHKLLTLIEEL NT seq 3840 nt NT seq  +upstreamnt  +downstreamnt atggagggttatccctggtggccttgcctggtttacaatcacccctttgatggaacattc atccgtgagaaagggaagaagtctaagtccatccgaattcatgttcagttttttgatgac agtccaaccaggggctgggttagcaaaaggatgttaaaaccatatacaggttcaaaatcg aaggaagcccagaaaggagggcatttttatagtgcaaagcctgaaatactcagagcaatg caacgtgcagatgaagctttgactaaagacaagactaagaggcttgaattggcagtatgt gatgagccctctgaaccagaggaagaagaagagatggaggtgtggcctgttgcaaacact tcttcattgagagatgaaaacgcaagggagggggtaggtgcaacctatgcatcagataaa agtgaagataatgaaatggagagtgacgaggaagtgctgcccaaggtgcaaggatctagg agaagtagccgccaagtgaaaaagctgagggttatatccgactcggagagtgacgtcggg ggctcagatgtggaattcaaaccagatactaaggaggaaggcagcagtgatgaaatgagc agtggagcaggggagagtgacagtgagggcctagacagtccaatcaaagttgctccaaag cggaagagaacagggactggaaatggctctatcaaaaggaaaagttcaaagaaggaaatc ccctccgctgccaagcgagcccctggtctttcacctgaaacaaagaatactttgagtggt ttctctgcccctcacagttctgaatcccaagcccctgttggtggagtatgtgatgatagt cgctctctctggtatcatgaaactttagaatggcttaagcaggacaagaggagagacgtg cacaggaggcgacctgaccaccctgattttgatgcatccactctgtatgtgcctgaggat ttcctcaattcttgtactcctgggatgagaaagtggtggcagataaagtctcagaacttt gatctcgtcatattttataaggtgggaaagttctatgagctctaccatatggatgctctt attggagtcaatgaactgggtcttgtgttcatgaaaggcaactgggcccattctggtttt cctgaaattgcatttggccggtattcagattccttagtgcagaagggctataaagttgca cgagtggaacagactgaaaccccggaaatgatggaggcccgatgccgaaagatggcgcac atatctaagcatgatagagtggtgaggagagagatctgtaggattattaccaaggggaca cagacatacagtgtcctagaaggggatccgtctgagaactacagtaaatatcttctcagt atcaaggaaaaagaggaagattcttctggtcacagtcgagtgtatggtgtgtgttttgtt gatgcctcactgggaaagtttttcataggtcagttttcagacgatcgccattgctccagg tttaggactctcgtggcacactaccctccagtccaagtcttgtttgagaaaggaaacctc tcaacggagaccaagacgattctcaaggttttgctatcttcttctcttcaggaaggtctg gtaccaggctcccagttttgggatgcagctaaaacactaagaactctactcgaagaagga tattttacagaaaagttaggcaaggatagcggggtgatgttacctgaggtgcttaaaggt atgacttcagaatctgatgttattgggttgacaccaggagagaagagtgaattggccctt tctgctctaggtggttgtgtcttctacctcaaaaaatgccttatcgatcaggaactttta tcaatggctaattttgaagaatacattcccctggattctgacgtgattagtgctaccaaa cctggtgctctctttgctaaaaccaatcaacgaatggtgctagatgctgtgacattaagt aacttagagattttcctgaatggaacaaatggttctactgaagggactctgttagaaaag attgatacttgccatactccttttgggaagcgtctcttaaagcagtggctttgtgccccg ctttgtagcccttatgcaatcaacgaccgcctggatgctatcgaggatctcatggatgtg cctgacaaagtctctgaggttgtagaccttctcaagaaacttccagaccttgaaaggctc ctgagtaaaattcataatgttgggtctcccctaaagagccagaatcaccctgatagcagg gctataatgtatgaggaaacaacatacagcaaaaaaaagattattgattttctttctgct ctggaaggattcaaaatagtatgtaaaattatagggatcatggaggataccgttggtgac tttaagtctaaaattcttaaacaaatcattactctgcagaccaaaaaccccaagggcagt tttcctgatttgactatcgaactgaatcgatgggatacagcttttgaccatgaaaaggct cgaaggactgggctcattactcccaaagcagggtttgatgctgattatgaccaagctctt gctgatattagagaaaatgaacagagtctcctggaatacttggagaaacagcgcagtcga attggctgtaggtccatagtctactgggggattggtaggaatcgttaccagttagaaatt ccagagagtttcaccaaccgtaatttgccagaagagtatgagttgaaatccactaagaag ggctgtaaacgatactggacaaaaaccattgagaagaaattggctaatctgataaatgct gaagaacgcagagatgtgtcactgaaggactgcatgcggagactgttctacaactttgac aaaaactacaaggattggcagtctgctgtggagtgcattgcagtactggatgttttgctg tgcctagctaaccacagccacggggctgatggtcctatgtgtcgcccggtgattgtattg ccagaagaacacaccccccccttcttagaacttagaggagcacgccatccctgcattaca aagactttttttggagatgattttattcctaatgacattctaataggttgtgaggaagag gatgaaagtggcaaagctttttgtgtgcttgttactggaccaaatatggggggcaaatct acacttatgagacaggctggtctgttagctgtgatggcacagttgggttgttatgtgcct gctgaagtatgtaggctaacacctattgacagaatattcaccagacttggtgcctcagac agaataatgtcaggtgaaagtacattctttgttgaattgagtgaaacagccagtatactt acacatgcaacctcacattctttggtgcttgtggatgaattaggaagaggcactgcaaca tttgatggtacagcaatagcaaatgcagttgttagagaacttgctgagaatataaagtgt cgcacactgttttctacccactaccattcattagttggagattattctcaaaatgttgca gtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagtcaggag acgatcaccttcctatataaattcattaaaggagcttgtcctaaaagctatggctttaac gcagctcgactggctaatcttccagaggaggttattcaaaagggacatagaaaagcaaga gaatttgagaagatgactcagtcactgcgattatttcgggaagtctgcctggttagtgaa aggtcgactgtagatgctgaagctattcataagttgctgactttgattgaggagttatga

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