Sorex fumeus (smoky shrew): 130029058
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Entry
130029058 CDS
T10594
Symbol
RARG
Name
(RefSeq) retinoic acid receptor gamma isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130029058 (RARG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfum03310
]
130029058 (RARG)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130029058 (RARG)
Nuclear receptors [BR:
sfum03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
130029058 (RARG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130029058
NCBI-ProteinID:
XP_055975898
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MATNKERLFVAGALGPGSGYPGAGFPFAFPGALRGSPPFEMLSPGFRGLGQPDLPKEMAS
LSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQK
NMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEVALDSY
ELSPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIK
IVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMH
NAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEA
LRLYARRRRPNQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPE
MFEDDSSQPGAHAKTASEDEAPRARGTGGSSPQPDQGP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacaaggagcgactctttgtggctggcgccctcgggcctggatccggctac
ccaggggccggcttccccttcgccttcccaggggcactcaggggctctccacctttcgag
atgctgagccctggtttccggggcctgggccagcctgacctccccaaggagatggcctct
ctctcggtggagacgcagagcaccagctcagaggagatggtgcccagctcaccctcgccg
ccgccgcctcctcgggtctacaagccgtgctttgtgtgcaatgacaagtcctcggggtac
cactacggggtcagctcttgtgaaggctgcaagggcttcttccgccgcagcatccagaag
aacatggtgtacacttgtcaccgggacaagaactgcatcatcaacaaggtcacccgcaac
cgctgtcagtactgccgcttgcagaagtgcttcgaagtgggcatgtccaaggaagctgtg
cggaatgatcggaacaagaagaagaaagaggtgaaggaggaggtggccctcgacagctat
gagctgagtccccagctggaagagctcatcaccaaggtcagcaaggcccaccaggagacc
ttcccctcgctctgccagctgggcaagtacaccacgaactccagcgcggaccaccgggtg
cagctggacctgggcctatgggacaagttcagcgagctggccaccaagtgcatcatcaag
atcgtggagttcgccaagcgactgcccggcttcacggggctcagcattgccgaccagatc
accctgctcaaggcggcctgcctggacatcctgatgctgcggatctgcacaagatacacc
cctgagcaggacaccatgaccttctcggacgggctgaccctgaaccggacgcaaatgcac
aacgctggcttcgggcccctcacagacctcgtctttgcctttgccgggcagctcctgccg
ctggagatggatgacaccgagacggggctgctgagtgccatctgcctcatctgcggagac
cggatggacctggaggaacctgaaaaagtggacaagctacaggagccgctgctggaagcc
ctgaggttatacgcccggcgccggcggcccaaccagccctacatgttcccaaggatgctc
atgaagatcaccgacctccggggcatcagcaccaagggagccgagcgggccatcacgctg
aagatggagattcccggccccatgccgcctctgatccgagagatgctggagaaccccgaa
atgtttgaggacgactcctcgcagcccggtgcccacgccaagaccgccagcgaggatgag
gctccgcgagcgcggggcacggggggcagcagcccacagcccgaccagggcccctga
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