Sorex fumeus (smoky shrew): 130029067
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Entry
130029067 CDS
T10594
Symbol
ASIC1
Name
(RefSeq) acid-sensing ion channel 1 isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
130029067 (ASIC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130029067 (ASIC1)
Ion channels [BR:
sfum04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
130029067 (ASIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASC
EFP
Motif
Other DBs
NCBI-GeneID:
130029067
NCBI-ProteinID:
XP_055975911
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MPIQIFCSVSFSSGEEAPGPLGEVWGGHRRQPQGNSDSEEEEEKEKTREEGLPVDLVAFA
NSCSLHGASHVFVGGGPGLRQAVWAVAFVLALGAFLCQVGDRVAYYLSYPHVTLLDEVAT
AELAFPAVTLCNTNAVRLSQLSYPDLLYLAPMLGLDESDDPGVPLAPPGPEAFSGEPFNL
HRFYNRSCHRLEDMLLYCSYRGGPCGPHNFSVVFTRYGKCYTFNSGRDGRPRLKTMKGGT
GNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVA
CQEQRQLIYLPPPWGTCKAVTMDSDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDAP
YCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFN
KSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFD
YAYEVIKHKLCRRGKCQKEAKRSSADKGVALSLDDVKRHNPCESLRGHPAGMTYAANILP
HHPARGTFEDFTC
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccagatcttctgttccgtgtctttctcctctggggaggaggccccagggccc
ctgggagaagtttggggtggccaccggcgccagccacaaggcaactcggactcagaagag
gaggaagagaaggaaaagaccagagaggagggcttgcctgtggacttggtggcttttgcc
aacagctgctccctgcacggtgccagccatgtatttgtgggagggggtccaggactgagg
caggccgtatgggcagtggctttcgtcctggcactgggtgccttcctgtgccaggtcggg
gaccgcgtcgcctattacctcagctacccacacgtgactctgctggacgaggtggccacc
gcggagctggctttccccgcggtcacgctctgcaacaccaatgccgtgcggctgtcccag
ctcagctaccccgacttgctctacctggcccctatgctggggctggatgaaagtgatgac
cccggggttcccctggcccccccagggcctgaggccttctctggggagccctttaatctg
caccgcttctacaatcgctcctgccaccggctggaggacatgctgctgtactgctcctat
cgcggggggccctgtggccctcacaacttctcggtggtcttcacgcgctatggaaagtgt
tacacattcaactcaggccgagacgggcgacctcggctgaagaccatgaagggcgggaca
ggcaacgggctggagatcatgctggacatccagcaggatgagtacctgcccgtctggggg
gaaactgatgagacatcatttgaagccggtatcaaggtacagatccacagccaggatgag
cctcccttcattgaccagcttggctttggcgtggccccagggttccagaccttcgtggcc
tgccaggagcagcggcagctcatctacctgcccccgccctggggcacctgcaaagctgtt
accatggactcggatttcttcgactcctacagcatcacagcctgccgcattgactgtgag
actcgctacctggtggagaactgtaactgccgcatggtgcacatgccaggggatgccccg
tactgcactcccgaacagtacaaggagtgtgcagatcctgcgctggacttcctggtggag
aaagaccaggaatactgcgtgtgtgaaatgccctgcaacctcacccgctatggcaaggag
ctgtccatggtcaagattcccagcaaggcttctgccaagtacctggccaagaagttcaac
aagtctgagcagtacataggggaaaacatcctggtgctggacattttctttgaagtcctc
aactatgaaaccatcgagcagaagaaggcctatgagatcgcagggctcctgggtgacatt
gggggccagatggggctgttcatcggggccagtatcctcacagtgctggagctcttcgac
tacgcctacgaggtgataaagcacaaactgtgccgccgcgggaagtgccagaaggaggcc
aaaaggagcagcgctgacaagggcgtggccctcagcctggatgacgtcaagagacacaac
ccgtgcgagagcctccggggccacccggccgggatgacgtacgcggccaacatcctacct
catcatcccgcgcgaggcactttcgaggactttacctgctag
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