KEGG   Sorex fumeus (smoky shrew): 130029085
Entry
130029085         CDS       T10594                                 
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04260  Cardiac muscle contraction
sfum04261  Adrenergic signaling in cardiomyocytes
sfum04814  Motor proteins
sfum04820  Cytoskeleton in muscle cells
sfum05206  MicroRNAs in cancer
sfum05410  Hypertrophic cardiomyopathy
sfum05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    130029085 (TPM1)
   04820 Cytoskeleton in muscle cells
    130029085 (TPM1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    130029085 (TPM1)
   04261 Adrenergic signaling in cardiomyocytes
    130029085 (TPM1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    130029085 (TPM1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    130029085 (TPM1)
   05414 Dilated cardiomyopathy
    130029085 (TPM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfum04812]
    130029085 (TPM1)
   04147 Exosome [BR:sfum04147]
    130029085 (TPM1)
Cytoskeleton proteins [BR:sfum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     130029085 (TPM1)
Exosome [BR:sfum04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   130029085 (TPM1)
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II Crescentin TMF_DNA_bd PUMA_CC DUF3450 Laminin_I ERM_helical CENP-F_leu_zip ATG16 DUF745 Lebercilin MscS_porin AAA_13 DUF1664 DUF16 CCDC144C FPP XhlA DUF4200 Fib_alpha
Other DBs
NCBI-GeneID: 130029085
NCBI-ProteinID: XP_055975928
LinkDB
Position
Unknown
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKALSDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctgaagctcgacaaggagaacgccttggac
cgagccgagcaggccgaggccgacaaaaaggcggccgaggaccgaagcaaacagctggaa
gacgagctggtgtcgctgcaaaagaaactcaagggcactgaagatgagctggacaaatac
tctgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggcgaccgac
gcggaagctgatgtggcctccttgaacagacgtatccagctggttgaggaagagctggat
cgtgcccaggagcgcctggccacagccctgcagaagctagaggaggctgagaaggccgca
gacgagagcgagagaggcatgaaagtcattgaaagccgagcccaaaaagatgaggagaaa
atggaaattcaggagatccagctgaaagaggccaagcacattgctgaggatgctgaccgc
aagtatgaagaggtggcccggaagctggtcattattgagagtgacctggagcgcgcggag
gagcgggccgagctctcagaaggcaaatgtgccgagcttgaagaagaattgaaaactgtg
accaacaacctaaagtccctggaggctcaagccgagaagtactcacagaaggaagacaaa
tacgaggaagagatcaaggccctttccgacaagctgaaggaggctgagacccgggctgag
ttcgcagagcggtcagtaactaagttggagaaaagcattgatgacttagaagacgagctg
tacgctcagaaactgaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacttccatataa

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