Sorex fumeus (smoky shrew): 130029183
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Entry
130029183 CDS
T10594
Symbol
HOXC11
Name
(RefSeq) homeobox protein Hox-C11
KO
K09296
homeobox protein HoxC/D11
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130029183 (HOXC11)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130029183 (HOXC11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130029183
NCBI-ProteinID:
XP_055976068
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MFNSVNLGNFCSPSRKERGADFGERGACASNLYLPSCTYYVPEFSTVSSFLPQAPSRQIS
YPYSAQVPPVREVSYGLEPSGKWHPRNGYSSCYAAADELVHRDCLPASSVTEILMKNEGA
YGGHHHPGAPHAAPAGFYPSVGKNSVLPQAFDRFFDNAYCGGGGGGGGGGDAPAEPPCPG
KGEAKGEPEAPPEAGPEAEADDESPDPSASASAPPAAKEPAKGAAPNAPRTRKKRCPYSK
FQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGN
PLL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcggtcaacctgggcaacttctgctcgccgtcgcgcaaggagcggggcgcg
gacttcggcgagcggggggcctgcgcctccaacctctacctgcccagctgcacttactac
gtgcccgagttctccaccgtctcctccttcctgccccaggccccctcgcgccagatctcc
tacccctactcggcccaggtgcccccggtgcgcgaggtctcctacggcctggagccctcc
ggcaagtggcacccccgcaacggctactcgtcctgctatgcggcggccgacgagctcgtg
caccgcgactgcctgcctgcgtccagcgtcaccgagatcctcatgaagaacgagggcgcc
tacggcggccaccaccacccgggcgccccgcacgccgcccccgccggcttctacccgtcg
gtcggcaagaacagcgtgctgccccaggccttcgaccgcttcttcgacaacgcctactgc
ggcggcggcggcggcggcggcggcggcggcgacgcgcccgccgagcccccctgccccggc
aagggcgaggccaagggggagcccgaggcgccccccgaggcggggcccgaggccgaggcg
gacgacgagagcccggaccccagcgcgtccgcgtcggcgcccccggcggccaaggagccg
gccaagggagccgcccccaacgccccccgcacccgcaagaagcgctgtccttattcgaaa
ttccagatccgggaactggagcgcgagtttttcttcaacgtgtatatcaacaaagagaaa
cggctgcagctgtcccggatgctgaacctgacggaccgacaagtgaaaatttggtttcag
aacaggaggatgaaagagaaaaaactgagcagagaccggctacagtatttttcggggaat
cctctgctgtaa
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