Sorex fumeus (smoky shrew): 130029193
Help
Entry
130029193 CDS
T10594
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
sfum04714
Thermogenesis
sfum05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130029193 (SMARCC2)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130029193 (SMARCC2)
PBAF complex
130029193 (SMARCC2)
GBAF(ncBAF) complex
130029193 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130029193
NCBI-ProteinID:
XP_055976079
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYCPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDLDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEPRAEGQATEEKKEPKEPREGVGAVEEETKEKPSETPKKDDEKGKEGDSEKE
SEKSDGDPTVDPEKEKEPKEGQEEVLKEVVEPEAERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQPPPPPVLPPGSQPVPPAGAAGPPAVHGLAMAQ
ASVAPAPAGSGAPPGGLGPSEQIGQAGPTAVPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
FPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATATMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gccgaaccacccaccaacaagtccctgtctagcctggtggtgcagttgctacagtttcag
gaagaagtttttggcaaacacgtcagcaatgcaccactcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggttctctgtgccacatacttgcagctgcctataaattc
aagagtgaccaaggatggcggcgttacgatttccagaatccgtcccgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtctttggtgcagaataattgcctgtctcggccc
aacatttttctgtgtccagaaatcgagcccaaactactggggaaattaaaggatattatc
aagagacaccagggaacagtcacagaggataagaacaatgcctcccatgtggtgtatccg
gtccccgggaacctggaagaagaggaatgggtgcgcccggtcatgaagagggataagcag
gtcctcctgcactggggctactgtcctgacagttatgacacgtggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactccggagaaacctaggaaggtccatgcaaag
tggatccttgacaccgacaccttcaacgaatggatgaacgaggaagactatgaagtgaat
gatgacaaaaaccccgtttcccgccgaaagaagatttcggccaaaactttgacagatgag
gtgaacagcccagattctgatcgacgggacaagaaggggggcaactataagaagaggaaa
cgctcgccctctccttcgccaaccccagaagctaaaaagaaaaatgctaagaagggtccc
tcaacaccttacaccaagtccaagcgcggccacagagaagaggagcaggaagacttaaca
aaggacttggatgaaccctcaccagtccccaacgtagaagaggtgacattgcccaagaca
gtcaacacgaagaaggactcggagtctgcccctgtcaaaggaggcaccatgactgacctg
gatgaacaggaggacgaaagcatggagaccacgggcaaggatgaggatgagaacagcact
gggaacaagggggagcagaccaagaaccccgacctgcacgaggacaacgtgaccgagcag
actcaccacatcatcatccccagctacgccgcctggttcgactataacagcgttcatgcc
atcgagcggagagccctccccgagttcttcaacggcaagaacaagtccaagactccagaa
atctatctggcctaccggaacttcatgattgacacgtaccggctcaacccacaggagtat
ctcacgtccaccgcctgccgcaggaacctggcgggtgacgtctgtgccatcatgagggtc
catgccttcctcgaacagtggggtctcattaactaccaggtggatgcggagagtcggcca
accccaatggggcctccacccacctctcacttccacgtgctggcggacacaccgtcaggg
ctggtgcctctgcagcccaaaaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccccgacaaaggcaaagagaaaccc
acagacatgcagaacttcgggctgcgcaccgacatgtacaccaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccacccgggagtggaccgaacaggagacgctgctcctg
ctggaggccctggaaatgtacaaggacgactggaacaaagtgtccgagcacgtgggcagc
cgcacgcaggacgagtgcatcttgcatttccttcgccttcccattgaagacccatacctg
gaggactcggaggcctccctgggccccttggcctaccagcccatccccttcagtcaatcg
ggcaaccccgtcatgagcactgtcgccttcctggcgtctgtcgtggatccgcgagtcgcc
tctgctgctgccaagtcagccctagaagagttctccaagatgaaggaggaggtgcccacg
gccctggtggaggcccacgtgcggaaagtggaagaagcggccaaggtgacaggcaaggcc
gacccggccttcggtctggagagcagcggcatcgcagggaccacgtcagacgagccggag
cggattgaggagagtggaactgatgagcctcgtgcagaaggccaggccacagaggagaag
aaggaacccaaggaaccccgagaaggagtcggggctgttgaggaagagacgaaggagaag
ccgagtgagactcccaagaaagatgacgagaaggggaaggaaggtgacagtgagaaggag
tcggagaagagcgacggggaccccaccgttgaccccgagaaggagaaggagccaaaggaa
gggcaggaggaagtcctgaaggaggtggtggagccggaggcggagaggaagaccaaggtg
gagcgggacatcggggagggcaacctgtccactgctgccgccgcagccctggccgctgcc
gccgtgaaggccaagcacttggcggccgtggaggagaggaagatcaagtccctggtggcc
ttgctggtggagacgcaaatgaagaagctggagatcaaactccggcactttgaggagctg
gagacgatcatggaccgggagcgagaagcactggagtaccagcggcagcagctcctggcg
gacagacaggccttccacatggagcagctcaagtacgcggagatgcgggcgcggcagcag
cacttccagcagatgcaccagcagccgccgcccccgcccgtgctgccgcccggctcgcag
cccgtcccgcccgcaggggccgcggggccgcccgccgtccacggcctggccatggcacag
gcctctgtggccccggcccctgccggcagcggggcccctccagggggcctgggcccctcc
gaacagatcgggcaggcggggcccacggcagtgccccagcagcagcagccggctggagcc
cctcagcccggggcagtcccgccaggggtacccccccctggaccccatggcccctcaccg
tttcccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcgggcac
ccaggcgtggccggtaatgctcctttgggtttgcctttcggcatgccgcctcctcctcct
cctcctgctccatccatcatcccattcggtagcctagccgactccatcagtattaacctc
ccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
gccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggcacgcccctgccgccggacccgacggcccccagcccaggcacggtcacccctgtg
ccgcctccacagtga
DBGET
integrated database retrieval system
