Sorex fumeus (smoky shrew): 130029266
Help
Entry
130029266 CDS
T10594
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
Brite
Spliceosome [BR:
sfum03041
]
Complex A
U1 snRNP components
U1 related factors
130029266 (PRPF40B)
Complex B
130029266 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130029266
NCBI-ProteinID:
XP_055976167
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPLSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVP
PMMPGMLMPAVPVTAATAPGADTASSAVTGTGPLRALWSEHVAPDGRIYYYNADDKQSVW
EKPSALKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAG
KQQQQPQALQPQPPQPQPDPPPAPPGPLPVPTGLLEPEPGGSEDCDVSEAAQPLEQGFLQ
QVEEGPASSTGQHQPLQQEEEESKPEPERSGFSWSNREKAKQAFKELLRDKAVPSNASWE
QAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHER
MTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKS
ILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEER
ERARLRERRQQRKNREAFQSFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGST
PLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGN
IKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFAC
DSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHNRKGKKHHRKRSHSPSGSESEE
EELPPPSLRPPKRRRQNPSESGSDPSSSLDSVESGGAAVGVRGSPSSRVLLGSAGIVLYP
DHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDSELQRTELLNRS
PGFGVKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccaggaatccccccaccctttcctccgatgggg
ctaccccccctgagtcagagaccaccagccatccctcccatgcctcctggcattatgccc
ccaatgcttccaccaatgggggcaccgccgccgctcacacagataccgggcatggttcct
cccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggctccgggt
gcggacaccgccagctctgctgtgactgggacaggccctctgagggccctgtggagtgaa
cacgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgctctcaagtccaaggcagagctgctgctgtcacagtgtccctggaaa
gagtacaagtccgacacaggcaaaccatactactacaataaccagagtaaggagtcccgg
tggacccggccgaaggacctggatgaccttgaggctctggtcaagcaggaggctgctggg
aagcagcagcagcaaccccaggcgctacagccacagccacctcagcctcagcccgacccc
ccgcctgcaccgcctggccccctgccggtacccacgggcctcctggaaccggagccaggt
gggagcgaagactgcgatgtgtcagaggcagcccagcccctggagcagggcttcctgcag
caggtggaggagggccccgccagttctactggacagcatcagccactgcagcaagaagaa
gaagaatcaaaaccagaaccagagaggtctggcttcagttggagcaaccgggaaaaggca
aaacaggccttcaaggagctgctgagggacaaggctgtcccttccaatgcctcgtgggaa
caggccatgaagatggtggtcactgacccccgttacagtgcgttgcccaagctgagcgag
aagaagcaggcattcaatgcctacaaggcacagcgggagaaggaagagaaggaagaggcc
cggctccgggccaaagaggccaagcagaccttgcagcatttcctggagcagcacgaacgc
atgacctcgaccacccgctaccggcgggcagaacagacctttggggagctggaggtctgg
gctgtggtccctgagagggatcgaaaggaggtttatgacgatgtccttttcttcctggcc
aagaaggagaaggaacaggccaaacagcttcggcgccgcaacatccaggccctgaagagc
atcctggatggcatgagtagcgtcaacttccagacaacttggtcccaagcccagcagtac
ctcatggataaccccagctttgctcaggaccatcagttgcagaatatggataaggaagat
gcattgatctgctttgaggagcacatccgagctttggagagggaggaggaagaggagcgg
gagcgggcccggcttcgggagcggcgccagcagcgcaagaaccgggaggccttccagagc
ttcctggacgagctgcacgagacagggcagctgcactctatgtccacttggatggagctg
tacccagcagtcagcactgatgtccgctttgccaacatgctgggccagccgggctccacc
cctctggacttgttcaagttctatgtggaggagttgaaggcacgcttccatgatgagaag
aagatcattaaagacatcctgaaggaccggggcttctgcgtggaggtgaacacggccttt
gaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaac
atcaagctgacctttaatagtctgctggagaaagcagaggcgcgggagagagagcgggag
aaggaggaggcacggaggatgcggcgcagggaagctgcctttcgaagcatgctgagacag
gccgtgcccgctctggagctgggcactgcctgggaagaggtccgtgagcgctttgcgtgc
gactcagcctttgagcagatcaccctggagtcggagcggatccggctcttcagggagttc
ctgcaggtactagagaccgagtgccagcacctccacaccaaaggccggaagcataacaga
aagggcaagaagcaccatcgcaagcgttcccattcgccctcgggctctgagtcagaggag
gaggagctgcccccaccgtctctccggcctcccaagcggagaaggcagaacccctcagag
tcaggctccgacccctcttcgtcacttgattcggttgaaagcgggggcgctgccgtcgga
gttcggggctccccatcctcccgtgttctccttggatcagcggggattgttctgtatcca
gatcacggccttcggaaagccaagaagccaaaaaagaagaccaagaagagaagacacaag
tcgaacagccctgagagtgagacagaccctgaggagaaagctggcaaggagagtgatgag
aaagaaccagaacaggacaaggacagtgagctccagcggacagagctcctcaaccgctcc
ccaggctttggagtcaagaaggagaagacgggctgggacacgtcagagagcgagctgagc
gagggggagctggaaaggcggcggcggacactcctgcagcagctggatgaccaccagtga
DBGET
integrated database retrieval system
