Sorex fumeus (smoky shrew): 130029437
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Entry
130029437 CDS
T10594
Symbol
TDRD1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130029437 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Motif
Other DBs
NCBI-GeneID:
130029437
NCBI-ProteinID:
XP_055976299
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MHHASSAKGGQELLPEVVLHGRRNHTTPTISMRVTNSTEHAINCKPMTQEGVSTGSVLFK
HLVLDKELKKQLLQTHFITKETVRFHYQSLLKLHFSRKSNTAQPKLQLAGRRRQQQQQQQ
RPQLASAPGAPGCPWKAKPAGKRLPSDSGAMGVTGAPAGGGVGGERGRDVQSEEEDRQRR
GRRLGRERSPGSWGPAAGPGRTRGDARPRTSPPAGGARRTEGLRAPPPTPHPGSPAPASL
PARAPAGCVRVCVGPPAAHARSSDLARDPPQPQPQPPSAPPALTPLLRASDRTPSEAAAA
PAQGPIAPQAEAARPGGGEAPRRASGADAQQLPPPRLFRHSISVKLPLHMMSRNNLEAST
CKMTEPFNFEKNESKLPPHESLRSPGGHANHPNFRLKSPENGNKKNNFLLCEQTKQYLAS
QEDSLVSSNPNGLSGEAVGAKGDRKNLPTGNSLSPLNAGSSSPPKEVNSKPGNNVSPAKS
KKIHELVENSLSINNPALFNSLASPFRSTTCHRCGLFGSLRCSQCKQTYYCSTTCQRRDW
SEHSIVCKPVQQNSPKLEETKSSLEAKNTEVKKESDYPLGVTKEIAISADKIMFSDLRSL
QLRETMEIKGTITEFKHPGDFHVQLYSSEVLEYMNQLSASLKETYANKAHEDDYIPVKGE
VCVAKYTVDQTWNRVAIKDVDMLQKKAQVLYIDYGNEEKIPVDRIHQLNRSIDLFPPCAI
RCCVANVIPVEGNWSNECIKATKSMLMEQFCSLKIVDILKEEVVTFAVDVRLQSSGKLLD
HVLIEMGYGLTPKGQDSKKQSTDQKDPDDAGPVMSENKTVVDRSDLIPKVLTLNVGDEFC
GVVAHIQTPDDFFCQQLQSGHKLAELQASLSEYCGQVSPRSDFYPTIGDICCAQFSEDDQ
WYRASVLAYASEESVLVGYVDYGNFEILSLTRLCPITPKLLELPMQAIKCMLAGVKPSLG
IWTPEATCLMKNIVQNKMITVKVADKLENSSLVELVDISVTPNVSVTKALIDAGFAVAGQ
GAMTEKPSNRKEASVPLGVEEKVDPLEWAWIELVVDQTVDVMVCMIYNPGEFYCHVLKKD
DLNKLSELNKSLAEYCQQKLPGDSKAEIGQPCCAFFAGDGNWYRALVKEILPNGNVKVHF
VDYGNTEEVTSDELHSISSKFLKLPFQGIQCWLADIQPKNKLWSKEAIARFQTSVAGVKL
QARVVEVNENGMGIELTDLSTAYPRIISDILIEEHLALQTSPPHKSLLNNRPINTQELQV
DTSRSRAISSADKWRTVELPVNKTIQASILEIINPNLFYAMPNEMPEDQEKLCVLTAELL
EYCSAQKNQLNYRPRVGDACCARYTSDDFWYRAIVLGASEEDVKVLYADYGNVEMLPLSR
VQPISASHLKLPFQIIKCSLEENTHKMNCCCTELQKQKQSVLEISSDVRKETIQWNTIRL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacgcttcctctgccaaaggaggacaggagctgctcccagaagtggtcctccac
ggcagaagaaaccacactactcctacaatctccatgcgtgtcaccaattccacagagcac
gccatcaactgcaaacctatgacacaggaaggggtttccactggctctgtcctctttaaa
cacttagtcctggacaaagaactgaaaaagcagctcttacagacgcattttataaccaag
gagactgttcggtttcactatcaatctctcctgaagcttcatttttcccgcaagagcaac
actgctcaaccgaagctgcagttagcagggcggcggcggcagcagcagcagcagcagcag
cgtccgcaactcgccagcgctcccggagctccgggatgcccttggaaggcgaagcccgcg
gggaagcggctcccaagcgactcgggtgcaatgggggtcacgggagcgccggccggaggc
ggggtggggggcgagcgtggccgcgacgtccagtccgaggaggaagaccggcagcgacgg
gggcgacggctcgggcgagagcgatcgccgggcagctggggcccggccgccgggccgggg
aggacgcggggggacgcacgcccccgcacgagccccccggccgggggggcgcgccgcacc
gaagggctccgagctccgccccccaccccccaccccgggtccccggcgcccgcctccctc
ccggcccgggcgcccgcgggctgtgtgcgcgtgtgcgtgggacccccggcggctcacgcc
cggtcctccgacctggcgcgcgaccccccccaaccccagccccagcccccgagcgcccct
ccggcactcaccccactcctccgcgcctcagaccgcacccctagcgaggccgctgcagct
ccggctcaggggcccattgctccacaggcagaggcggcccgacctggaggtggcgaggcg
ccgcggagggccagcggggccgacgcacagcagctccctccgccgcggcttttccggcat
tctatcagtgttaaacttccacttcatatgatgtcaagaaataatttggaggcatctact
tgtaaaatgacagaaccatttaattttgaaaaaaatgaaagcaagcttccgccacatgag
tctttaagaagtcctggaggacatgctaaccatcccaatttcaggttgaagagcccagag
aatggaaataaaaagaacaattttttgctttgtgagcaaaccaaacagtatttggctagt
caggaagacagtttggtatcctcaaaccctaatggcctcagtggggaagcggttggagca
aaaggagataggaagaacttgccgacaggaaactccttgtcaccattaaatgctggaagc
agttcaccacccaaagaagtaaatagtaaacctggaaataatgtgtctccggcaaagtca
aaaaaaatacatgagttggttgagaattcattgtccataaacaacccagcgctgttcaac
tccttagcatcgccttttcggtcaacaacttgccatcgctgtgggctgtttggctcactg
aggtgctcccagtgcaagcaaacatactactgctccaccacctgccagaggagggactgg
tccgagcacagcatcgtgtgtaagcccgtgcaacaaaattccccaaaacttgaagaaact
aagtcatctcttgaagcaaagaacacagaagtaaaaaaagagagtgattatcctcttgga
gttactaaagaaatagccatttctgctgataaaataatgttttctgatttgagaagtctg
caactcagggaaactatggaaataaagggtacaattaccgaattcaaacacccgggagat
ttccatgtgcagttgtattcttcagaagttttagaatacatgaaccagctctctgcaagc
ttgaaggaaacatatgcaaataaggcgcatgaagatgattatattcctgttaagggggaa
gtgtgtgttgccaagtatacagtggaccagacttggaacagagtagcaataaaagatgtg
gatatgctgcagaagaaggctcaagtcttatatattgattatggaaatgaagaaaaaatt
cctgtggacagaattcaccagctaaacagaagcattgacttatttcctccctgtgccata
aggtgctgtgtagccaatgttatcccagtggagggaaattggagcaatgagtgtatcaaa
gctactaaatcaatgttaatggaacagttctgctctctaaagattgttgacatcttaaaa
gaggaagtagttacctttgctgtggatgttaggctgcaaagttcaggaaaactcttggac
cacgtgcttatagaaatgggatatggcttaacacccaagggacaagactctaagaaacaa
agtacagatcaaaaggaccctgatgatgctggaccagtgatgtcagaaaacaaaactgtt
gttgacagaagtgacctaatccccaaagtgttgactctgaacgtgggggatgagttttgt
ggtgtggttgctcacattcagacaccagatgacttcttctgccagcagctacagagtgga
cataagctcgctgaacttcaggcatcccttagcgagtactgtggccaggtatctccacgc
tcagatttttatccaaccattggtgatatctgctgtgctcagttctcagaggatgatcag
tggtaccgtgcctctgttctggcttatgcctcggaagaatcagtattggtaggttatgtc
gattatgggaactttgaaatcctgagtttgacaagattgtgccctataactcccaagctg
ttggaattgcccatgcaagctataaagtgtatgctggcaggagtaaagccgtcactaggt
atttggactccagaagctacgtgtcttatgaaaaatattgtacagaataaaatgatcaca
gtgaaggtggcagacaagttggaaaacagttccctggtggagcttgtggacatttccgtg
actccaaatgtcagtgtgaccaaagccctcattgatgcaggtttcgctgtggcgggccaa
ggggccatgactgagaaacctagtaataggaaagaagccagtgttcctttgggtgtagaa
gaaaaagtagatccattggagtgggcctggattgagcttgttgttgatcaaacagtagat
gttatggtctgtatgatatataatcctggagaattttattgccatgtccttaaaaaggat
gatttaaataaactcagtgagttgaacaaatcattagcagaatattgtcagcagaagtta
cctggtgattctaaggcagaaataggacaaccttgttgtgctttttttgcaggtgatggc
aattggtatcgcgcattagtcaaggagatcttaccaaacggaaatgtgaaagtacatttt
gtggattacggaaacactgaagaagttacctctgatgagctacattcgatatcatcaaaa
tttttaaaacttccttttcaagggatacagtgctggctagcagatatccagcctaaaaac
aagctctggtccaaagaagccattgcaaggtttcagacgagtgttgcaggggtcaaactc
caagctcgggtagttgaagtcaatgaaaatggaatgggaattgagctcacagatctttcc
actgcttatcccagaataattagtgatattctaattgaagaacatctggccttacaaact
agtcctccgcataaaagcttactgaataaccgacctattaatacacaagaacttcaagtt
gatacttcaaggtctcgagccatctcttcagctgataagtggagaacagtcgaattgccg
gttaataaaactatacaagcaagcatactagaaatcataaacccgaacttgttttatgct
atgccaaatgagatgccagaagatcaggaaaaactgtgtgtgctaacagccgaattgtta
gaatattgtagtgctcaaaaaaaccagctcaactatcgcccaagagttggagatgcctgc
tgtgccagatacacaagtgatgatttctggtaccgggccattgtgctgggggcatctgag
gaagacgtgaaagtgctctatgccgactatgggaacgttgagatgctcccactctccaga
gtgcagcccatctctgccagccacctaaagctccctttccagatcatcaaatgctccctt
gaagagaacacgcataagatgaactgctgctgcacagagttacagaaacagaagcagtct
gtcttggagataagctctgacgtgagaaaggaaacaatacagtggaatactatacggctg
taa
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