Sorex fumeus (smoky shrew): 130029489
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Entry
130029489 CDS
T10594
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfum03009
]
130029489 (RRP12)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
90S particles
Other 90S particles
130029489 (RRP12)
Pre-60S particles
Other pre-60S particles
130029489 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
130029489
NCBI-ProteinID:
XP_055976374
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPATCHHRQAARSRFFSRPSGKSELTVDAVKLHN
ELQSGSLRLGPNEGAEMAVDGEEVALAPSERTSGTFLSGLSDCTNVTFSKVQRFWESNSA
AHKEICAVLAAVTEVIRSEGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVP
SPVLIKKFSDTSKAFMDLLSAQAGGSSTSALRWVLSCLATLLRKQDLESWGYPLTLQVYH
GLLSFTVHAKPKVRKAAQHGVCSVLKGSDFMFGDKAPAHHPAAASTAKFCIQEMEKSGGA
KEATGTLHMLTLLKDLLPCFPEGLVKSCCETLLRVMTLSHVLVTACAMQAFHGLFHSKPG
PGTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLPRFFG
TAMSSLLSPHSQVVTAATQSLQVLLRECVAPHMTDIGSVTSSSTGPAQYVAKMFRCVEEG
LTYKFHAAWSSVLSLLCVFFQACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAA
VASMGPEVVLEAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTSYFLPLATTLKS
KAMDLAQAGSSVESKIYDTLQWQVWTLLPGFCTRPTDVAASFRGLARTLGMAISERPDLR
VTVCQALRTLITKGCEAEADRAEVSHFAKNFLPILFNLYGQPVAAEDTPTPRRAVLETIR
TYLTITEPQLVNGFLEKASAKVLDPASSDFTRLSVLDLVVALAPHADEAAISKLYSTIRP
YLESKAHGVQKKAYRVLEEVCASEQGPGARFVQSHLDDLKKTLLDSLRSTSSPAKRPRLK
CLIHIVRKLSAEHEDFIAALVPEVILCTKEVSVGARKNAFALLLEMGRAFLRFGQSQEEA
LQRYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTDTVEQLLQNVCLLLASRTRDV
VKSALGFIKVAAVTMDVTHLAKHVQLVMDAIGNLSDDMRRHFRMKLRNLFTKFIRKFGFE
LVRGLLPTEYHKVLVNIRKAEARAKRHRALNEAALDEEDEEEEEPAPGRGDSIEEILADS
EEEDEEEERSQGREQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGLGRGKKD
HGFKVSADGRLIIRDEEEEESAGKVDEEEDTKGEDEEMAELMADMGVKSKKHPKRLRQKE
ADDEDLEVPPQYQAGGSGIHRPVAKKAAPGAEYKAKKAKGDIKKKGRLDPYAYIPLNRTK
LNRRKKMKLQGQFKGLVRATQRGAQVGHKLRRKERRKEHRP
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggggcgctcgggcaagttaccgtccggggtctcggctaagttgaaacgctggaagaaa
ggacacagtagcgacagcaaccccgccacctgccaccaccgccaggcagcccgcagccgc
ttcttcagccggccttcaggcaagagcgagctgacggtggacgccgtcaagctgcacaat
gagctgcagtcggggtccctgcgcctgggcccgaacgaaggggccgagatggccgtggac
ggagaagaggtggcgctggccccctccgaacgcacctcgggcaccttcctgagtggcctc
tccgactgcaccaacgtcaccttcagcaaagtacagcgcttctgggagtccaactcggcc
gcccacaaggagatctgtgctgtcctggcagctgttacggaggtgatccgctccgaggga
gggaaggagacggagactgagtactttgccgcgctgatgaccacaatggaagccgtggaa
tcccccgagtctctggccgctgtcgcttacctgctcaacctcgtcctgaagcgcgtgccc
agccccgtgctcattaagaagttctcggacacctccaaagctttcatggacctcctgtct
gcccaggctggcggcagctccacctccgctctccgctgggtcctctcctgcctcgccacc
ctactgaggaaacaggatctggagtcctggggctaccccctgacgctgcaggtgtaccac
gggctgctgagcttcaccgtgcatgccaagcccaaggtccgcaaggctgcccagcacgga
gtgtgctcagtcctcaagggcagtgacttcatgttcggggacaaggcccccgcccaccac
cctgctgctgcgtccaccgccaagttctgcatccaggagatggagaagtccggaggtgcc
aaggaggccaccggcacactgcacatgctgacgctgctgaaggacctgctgccctgcttc
cctgaaggcctggtcaagagctgctgcgagacactcctcagggttatgaccttgagccat
gtgctggtgacagcctgtgccatgcaggcctttcacggcctcttccattccaagcctggc
cctggtaccctctcggcagagctcaacgcccagatcatcacggccttgtatgactatgtt
cccagcgagaatgatctgcagcccctgctggcctggcttaaggtcatggagaaagcccac
atcaacctggtcaggctgcagcgggacctgggcctgggccacctccctcgcttctttgga
accgcgatgagctccctcctctccccccactcacaggtggtgacagctgccacccagagc
ctccaggtgctcctgagggaatgcgtggcccctcacatgactgacatcggctccgtgacc
tcctccagcacaggccctgcccagtatgtggccaagatgttcaggtgtgtggaggagggc
ctgacatacaagttccacgcagcctggagctccgtgttgtcgctgctgtgtgtgttcttc
caggcgtgcgggaggcaggcccaccccgtgatgaggaagtgcctccagtcgctgtgtgac
ctgcgcctctccccccacttcccccacacggcagctctggaccaggccgtgggggccgcc
gtggccagcatggggcccgaggtggtgctggaggccgtgcccttggaaatcgatggctcc
gaggagactctggacttcccgcggagttggctgctgcccgtcatccgggaccacgtccag
gagacacgacttggtttcttcacctcctacttcttgcccctggccaccaccctgaagagc
aaagcaatggacctggcccaggcgggcagctcggtggagtccaagatctacgacacgctc
cagtggcaggtctggacactcctgcctggcttctgcacgaggcccacagacgtggccgcc
tccttccgagggctggcgcggaccctgggcatggccatcagtgagcgcccagacctcagg
gtcaccgtgtgccaggccctgcgcaccctcatcaccaagggctgtgaggcagaggccgac
cgagccgaagtgagtcactttgccaagaattttctgccaatcctcttcaacctgtacggg
cagcctgtggcagccgaggacactccaaccccccgccgagccgtgctggagaccatccga
acttacctcaccattacggagccccagctggtgaatggcttcctggagaaggccagcgcg
aaggtgctagatcctgccagctctgacttcaccagattgtctgtcctggacctggttgtg
gcgttggcccctcatgcggacgaagctgccatcagcaagctgtactccaccatccggccc
tacctggagagcaaggcccacggggtgcagaagaaggcctaccgcgtgctggaggaggtg
tgtgccagcgagcagggcccaggggcgcgctttgtgcagagccacctggacgacctgaag
aagaccctgctggactctctgcggagcacctcctcgcccgccaagaggccccgcttgaag
tgcctcatccacattgtgaggaagctctcggccgagcacgaggacttcattgccgctctt
gtcccggaggtgatcctgtgcaccaaggaggtgtcggtgggcgcacgcaagaacgccttc
gccctgctgctggagatgggccgcgccttcctgcgcttcggccagagccaggaagaggcg
ctgcagcgctacctcgtcctgatctaccccggcctcgtgggcgccgtgaccatggtcagc
tgcagcatcctggccctcacccacctcctcttcgagtttaaaggcttgatggggaccgac
acggtggaacagctgctccagaacgtgtgtctgctcctggcctcacgtacccgcgacgtg
gtcaagtcggctctgggcttcatcaaggtagcggccgtgaccatggacgtcacgcacctg
gccaagcacgtgcagctggtgatggacgccatcgggaacctctccgatgacatgcggcga
cacttccgcatgaagctccggaacctgttcaccaagttcatccggaagtttgggtttgag
ctggtgagggggctgctgcccacggagtaccacaaggtgctggtgaacatccggaaggcc
gaggcccgggccaagaggcaccgtgctctgaatgaggccgccctggacgaggaggacgag
gaagaggaggagccagccccggggagaggcgacagcatcgaggagatcctggccgactcg
gaggaggaggacgaggaggaggagaggagtcagggcagggagcagcggaagctggcccgc
cagaggagccgggcgtggctgaaggaggggggtggcgacgagcccctcaacttcctggac
cccaaggtggcccagagagtccttgccacgcagcctgggctgggccgaggcaagaaggac
catggcttcaaggtgagcgccgatggccggctgatcatccgggacgaggaggaggaggag
agcgctggcaaggtggacgaggaggaggacacgaaaggggaggacgaagagatggcggag
ctgatggcggacatgggcgtcaagagtaagaaacaccccaagcgtctgcgccagaaggag
gccgacgacgaggacctggaggtgccccctcagtaccaagctggaggctctggtatccat
cggcctgtggccaagaaggcggcgccaggagctgagtacaaggccaagaaggcgaagggg
gacataaagaagaaaggccggctggacccctatgcctacatccccctcaacagaaccaag
ctgaaccgaagaaagaagatgaagctgcaaggccagttcaagggcctggtgagagctacc
cagcgcggggcccaagtgggccacaagctgcgcaggaaggagcgcaggaaggagcatcgg
ccctga
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