Sorex fumeus (smoky shrew): 130029515
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Entry
130029515 CDS
T10594
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130029515 (SORCS1)
Membrane trafficking [BR:
sfum04131
]
Protein recycling
Others
Others
130029515 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130029515
NCBI-ProteinID:
XP_055976440
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MGKVGAAGGPPARLSALLAGAGLLVLCAPGHGGRAPGCPPPRPGPGPRGAPTPGVFFPPG
PRGGAPATPLPLLGRPLFAVAPGDRALSLERARGPRASPAPTPRSGRRRRSPDDPDQAAG
AEGASRSPRGVPRDGGQREPGTPERDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEGVVPNRFYWSVMGTNKDTDLVHLEARTVDGHSQYLTCRMQNCTEANRSK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNAFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIENQVKTFITYNKGRDWRLLQAPDTDLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGKYAGAMESEP
CVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTFIQVDFGDG
IAVSYVNLSSMEDGIKHVYHNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSLSFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLSFSPNLDDYNPDIPEWRRDISRVIKKSLVEVTGVPGQHI
LVAVLPGLPTAAELFVLPYQDPAGENKKSAEDLEQISELLIHKLNQNLVHFELKPGVQVL
VHAAHLTAAPLVDLNPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKE
REMVSRVSQPESRPHIPQTELRRPGQLIDEKVESQLIGSISIVAENQSTKEIPTYVNV
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttggcgccgccggcggcccccctgcccggctgagcgcgctcctggccggc
gcggggctcctggtgctctgcgccccgggccacggcggccgcgctccgggctgccccccg
ccgcgccccggccccggcccgcgcggggctccgacccccggggtcttcttcccgccgggc
cctcgcggcggagcccctgccacgcccctgcccctcctcgggcgccccctgttcgcggtg
gcccccggagaccgagcgctgtccctggagcgggcccggggcccccgggcatccccggcg
ccgaccccgcgctccggtcggaggagacgcagccccgatgatccggaccaggcagccggg
gcagagggtgcgagtcgcagcccccggggagtgccgcgggacggcgggcagcgggagccc
gggactccggaacgggacccggacaaagccactcggttccggatggaggagctgagactg
accagcaccacgttcgcgctgaccggcgattccgcgcacaaccaagccatggtccactgg
tctggccacaacagcagtgtgattctcattttgacaaagctctatgactataacctgggg
agtgtcacagagagctcactttggaggtcgactgattatggaacaacctatgagaagcta
aatgataaagttgggctgaaaacaattttgagttatctctacgtgtgtcctaccaataag
cgtaagattatgctactgactgacccagagattgagagcagtttgctaatcagctcagat
gaaggggcgacctatcagaaataccgactcaacttctacattcagagcttgctttttcac
ccaaagcaagaggactggattctggcatacagccaagaccaaaagttgtacagctctgct
gaatttgggagaaggtggcagctgatccaggaaggggttgttccaaacaggttctactgg
tctgtgatgggaaccaacaaggatacagatctcgtgcatcttgaggccaggacagtggat
ggtcattcacaatacctaacctgccggatgcagaactgcacagaggcgaacagaagtaaa
cctttcccaggctacattgacccagattctttgattgtccaggatgattatgtgtttgtt
cagctgacctcaggggggcgaccgcattactacgtgtcctatcggaggaatgcttttgcc
cagatgaaactacccaaatatgctctgcctaaggatatgcatgtcatcagtacagatgag
aatcaagtgttcgcagcagttcaagaatggaaccagaatgacacctacaacctctacatc
tcagacacccggggtgtctactttaccttggcccttgagaatgtccagagcagtagaggc
cctgagggcaatgtcatgatcgacctctatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgagaaccaggtgaagactttcattacatataacaaaggccgagac
tggcgtctgctgcaagctccagacactgatctaagaggggaccccgtacattgtttactg
ccctattgctcactacaccttcacctgaaggtttctgagaatccctatacatctgggatt
attgccagccgagacacagctcccagcattattgtggcttcaggtaatattggttcagag
ttatcagacagtgatatcagtatgtttgtgtcttcagatgcagggaacacttggagacag
atctttgaagaagaacacagtgtcttgtatctggatcagggtggcgtcttggtggctatg
aagcacacatctctccccattcgacatctttggttgagttttgatgaaggaagatcttgg
agcaaatacagtttcacatctatcccactgtttgtggatggggttctgggtgaacctggg
gaagagacactcatcatgacagtgtttggacacttcagtcaccgctctgagtggcagctg
gtaaaagtggactataagtccatttttgatagacgttgtgctgaggaggactacagacct
tggcagctgcacagccagggggaagcatgcatcatgggagcaaaacggatatataagaag
cgaaaatcggagcgaaagtgcatgcaaggaaaatatgccggagctatggaatctgaaccc
tgtgtctgcacagaggcagattttgactgtgactatggttatgagcgacatagcaatggt
caatgcctgccagcattttggttcaatccatcttctctgtctaaggactgcagcttggga
cagagttacctcaatagcactgggtaccggaaggtggtttctaataactgcactgatgga
gtgagagagcaatatactgccaaaccccaaaagtgtccaggcaaggcccctcgggggctc
cggattgtcactgctgatgggaagctgacagcagaacaaggacataatgtcacgcttatg
gtgcaactggaagagggtgacgtgcagcggacgtttatccaagtggactttggggatggt
atcgccgtatcttacgtcaatctcagctccatggaggatggcatcaagcacgtctatcac
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcctctggagcatgtgcacctatcccttccctttgtc
accaccaagaacaaggaagtcaatgcaactgcagtgctgtggcccagccaagtgggcacc
ctcacttacgtgtggtggtatgggaacaacacagagcccttgatcaccttagagggaagc
ctttcgttcaagttcacttctgaagggatgaacaccatcacggtgcaggtgtctgctggg
aatgctatcctgcaggacacaaagaccatcgccgtgtatgaggagttccgatctcttcgt
ctttctttttctccaaacttggacgactacaacccagacatccccgagtggaggagagat
attagccgagtcatcaaaaagtccctggtagaagtcacaggagttccaggccaacacata
ttggtggcagtgctccccggcttgcccactgctgcagagctttttgtcttgccctatcag
gatcctgcaggagaaaacaaaaagtcagcagaggacctggaacagatatcagagcttttg
atccacaagctcaaccaaaacttggtacactttgagctgaagcctggagtccaagtcctt
gtccatgcagctcacttaacagcagctccgctggtggacctcaatcccacccacagtggc
tctgccatgctgatgctcctttcggtggtgtttgtgggtctggcagtgtttgtcatctac
aagttcaaaaggaaaatcccggggattaatgtttatgcccagatgcagaatgagaaagaa
cgagagatggtcagtcgagtcagtcagcccgaaagcaggccccatatccctcagactgaa
ctcaggaggcctggccagctgatagatgagaaggtggagtcacagctcataggaagtatt
tccatagttgctgagaatcaaagcacaaaagaaatccctacctatgtaaatgtttga
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