Sorex fumeus (smoky shrew): 130029599
Help
Entry
130029599 CDS
T10594
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130029599 (TRUB1)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130029599 (TRUB1)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130029599 (TRUB1)
Prokaryotic type
130029599 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
130029599
NCBI-ProteinID:
XP_055976572
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MAEAEAAALVSSSSSSLPSDPAPDLDTAAAAAATAPDASAQAAARPGAEGRVSKAALATK
LLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQALKIGHGGTLDSAA
RGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGRVTEEKPYDKITQEDIEG
ILQKFTGTIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPLFT
LDVECGGGFYIRSLVSDIGKELSSCASVLELIRTKQGPFTLEEHALPEDKWTIDDIAQSL
EHCSALLPAELALKKSKPEESSEQVLSCEYMTLNETKGEEDVIKTS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccgaggcggcggcgctggtgtcgtcgtcatcgtcgtctctgcccagcgac
ccggctcctgaccttgacacggcagccgcggctgcagccacggcccccgacgcgtctgcg
caggctgcggcccggccgggagccgagggccgcgtgtccaaggccgccctggcgaccaag
ctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggcccacgtcggccgag
ctgctgaaccggctgaaggagaagctgctggcagaagctggaatgccatctccggaatgg
actaaaaggaaaaagcaggccctgaaaattggccatggcgggaccctagacagcgcagct
cgaggagttctggtggttggaattggaaggggaacaaaaatgttgaccagtatgttgtca
gggtccaagaggtatattgccattggagaactcggcaaggccacggacacgctggattcc
acgggcagagtaacagaagaaaagccctacgataaaatcacacaagaagatatcgaaggc
attctgcagaagttcacgggaactatcatgcaagtccctccactctattcggcactgaag
aaagacggacagaggctctcgacgctgatgaagagaggggaggtggtggaagccaagccc
gcccggcccgtcacggtctacagcctatccctgcagaaattccagccgccgctgttcacg
ttagatgttgaatgcggaggaggtttttatatcagaagcttggtcagtgacattggcaaa
gagctctcttcctgtgccagcgtgctagagctgatccgaaccaaacaggggccatttacc
ctagaggagcacgcccttcccgaggacaaatggaccattgatgacattgcacaatctctc
gagcattgctctgctcttctgccagcagagttggcacttaaaaaatccaaaccagaagag
tccagtgagcaagttttgagctgtgaatatatgactctaaatgagaccaagggagaggag
gatgtaattaagacatcttaa
DBGET
integrated database retrieval system
