Sorex fumeus (smoky shrew): 130029634
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Entry
130029634 CDS
T10594
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04110
Cell cycle
sfum04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130029634 (SMC3)
04114 Oocyte meiosis
130029634 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130029634 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfum00535
]
130029634 (SMC3)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130029634 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
130029634 (SMC3)
Proteoglycans [BR:
sfum00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130029634 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130029634
NCBI-ProteinID:
XP_055976618
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggtcatcatccagggctttcggagctaccgggaccagaccatcgtg
gaccccttcagttccaagcacaacgtgatcgtgggcagaaatggatctggaaaaagtaac
tttttttacgcaattcagtttgttctcagcgatgagtttagtcatcttcgtccagaacag
cgattggctttgttgcatgaggggaccggtcctcgagttatttctgcttttgtggagatt
atttttgacaattccgacaacaggttgcccatcgataaagaggaagtttcacttcggaga
gttattggtgccaaaaaggaccagtatttcttggacaagaaaatggtcacgaaaaatgat
gtgatgaacctcctggagagtgctggtttttctcgaagcaatccttattatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattcacagagactaaagctattaaga
gaagtagctggtactagagtatatgatgagcgaaaagaagagagcatctctctaatgaag
gagacagagggcaaaagagaaaaaattaatgaattgttaaaatatattgaagagagatta
catactttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatacaccatttacaatcaggaactgaatgagactcgtgctaaacttgat
gagctgtctgctaagcgagagactagtggagaaaaatccagacaattaagagacgcccag
caagatgcaagagataaaatggaggatattgaacgccaagttagagaactaaaaacaaaa
atttcagctatgaaagaagaaaaagagcagcttagcgctgaaagacaagaacaaattaag
cagaggactaaattagagcttaaggccaaggatttacaagatgaattggcaggcaacagt
gaacagaggaaacgcctgttgaaagagaggcagaagctgcttgaaaagatagaagaaaaa
cagaaagagctggcagaaacagaacctaaatttaacagtgtgaaagaaaaagaagagcga
ggaattgctagattggcccaggctactcaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccagtttacttcaaaagaagaaagggataagtggattaaaaaggaactgaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggacactgaagcaaataaagagaaaaatttggaacaatataataaactggatcaagat
cttaatgaagtcaaagcacgagtagaagaactggacagaaaatattatgaagtgaaaaac
aagaaagatgagttacagagtgaaagaaactacttgtggagagaagagaatgcagaacag
caggcccttgctgctaaaagagaagatcttgaaaagaaacagcaacttctgagagcagca
acaggaaaggccattttaaacggaatagacagcataaacaaggtattagaccactttcgt
agaaaaggaataaaccagcatgttcaaaatggctatcatggcattgtgatgaacaacttt
gaatgtgagcctgctttctacacatgtgtggaagtcactgctggaaacaggttattttat
catattgttgattcagatgaagtcagcacaaagattttgatggagtttaataaaatgaat
cttcctggagaggtcacttttttgcctctaaacaagttagatgtgagggatacagcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcctagatttgac
aaagctttcaaacatgtgtttggaaaaacacttatttgccgtagcatggaagtttcaacc
cagctggcccgtgctttcactatggattgcattactctggaaggagatcaagttagtcat
cggggtgctctaactggaggttattatgacacaaggaaatctaggcttgaattacagaaa
gatgttagaaaagcagaagaggagcttggtgagcttgaagcaaagctcaatgaaaatctg
cgcagaaatattgaaaggattaataatgaaatcgatcaattgatgaaccaaatgcagcaa
atagaaacccagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgctaaaagaaaaaaggcagcaatccgagaaaacctttatgcccaagcaacgtagctta
cagagtttggaggcaagtttgcatgctatggagtccaccagagaatcattgaaagcagaa
ctaggaacagatttgctttctcaacttagtctagaagatcagaagagagtagatgcactg
aatgatgaaattcgccaacttcagcaggaaaacagacagttgctgaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttacctcaatgaaaatttgagaaaacgattg
gaccaagtagaacaggaacttaacgaactgagagagacagaaggaggtactgttctcact
gctacaacttccgaacttgaagctattaataaaagagttaaagatactatggcaagatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggaacgctggaaaaacatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactggaaaagatgaccaaccgacaaggcatgctgttgaagaagaaggaagagtgtatg
aagaagattcgagaacttgggtcacttcctcaggaagcatttgaaaaataccagacatta
agcctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaaatacagc
cacgttaataaaaaagctttagatcagtttgtaaatttctctgagcagaaagaaaaatta
ataaagcgacaagaagagttggataggggatacaaatcaatcatggaactgatgaatgtg
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtatccaagaacttc
agcgaggtgttccagaagctagtgcctggaggcaaagctactttggtgatgaaaaaagga
gatgtggagggcagtcagtctcaggatgaaggagaaggaagtggcgaaagtgagaggggc
tctggatcccagagcagtgtcccatcagttgaccagttcactggagttggaattagggtg
tcatttacagggaaacaaggtgaaatgagagaaatgcaacaactttctggtggacagaaa
tccttggtcgctcttgctctgatatttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgaaattgaccaagccctggatgctcagcatcgaaaagctgtgtcagatatg
ataatggaacttgctgtacatgctcagtttattacaacaacctttaggcctgagctgcta
gaatccgctgacaaattctatggtgtaaagttcagaaataaggtcagtcatattgatgtg
atcacagcagagatggccaaagactttgttgaagatgataccactcatggttaa
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