Sorex fumeus (smoky shrew): 130029672 Help Entry 130029672         CDS       T10594                                  Symbol CLTCL1 Name (RefSeq) clathrin heavy chain 2   KO K04646   clathrin heavy chain Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04142   Lysosome sfum04144   Endocytosis sfum04721   Synaptic vesicle cycle sfum04961   Endocrine and other factor-regulated calcium reabsorption sfum05016   Huntington disease sfum05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     130029672 (CLTCL1)    04142 Lysosome     130029672 (CLTCL1)  09150 Organismal Systems   09155 Excretory system    04961 Endocrine and other factor-regulated calcium reabsorption     130029672 (CLTCL1)   09156 Nervous system    04721 Synaptic vesicle cycle     130029672 (CLTCL1)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     130029672 (CLTCL1)   09164 Neurodegenerative disease    05016 Huntington disease     130029672 (CLTCL1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfum04131]     130029672 (CLTCL1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sfum04147]     130029672 (CLTCL1) Membrane trafficking [BR:sfum04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     130029672 (CLTCL1) Exosome [BR:sfum04147]  Exosomal proteins   Proteins found in most exosomes    130029672 (CLTCL1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41 Gp18_dom_I capSnatchArena Motif Other DBs NCBI-GeneID:  130029672 NCBI-ProteinID:  XP_055976663 LinkDB All DBs Position Unknown AA seq 1621 aa AA seqDB search MAQILPIRLHEHFQLQDLGINPDNIGFSTLTMESDKFICVQEKVGEQAHVVIIDVSDPMA SIRWPISAESAIMNPASKVIALKAGKTLQIFSIEMKNKMKAHTLAEEVIFWKWVSVNTVA LVTETAVYHWSMEADSQPIKMFDRHASLAGCQMIHYRTDEYQKWLVLVGISAQQNRVVGA MQLYSVDRKVSQPIEGHAAAFAEFKAEGNAKPATLFCFAVRNPTGGKLHIIEVGQPAAGN QPFVKKAVDVFFPPDAQTDFPVAMQIGAKHGVIFLITKYGYLHMYDLESGACIYMNRISA DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNILQNPDLGLRLAIRSNLAGA EELFVKKFDTLFAQGSYAEAAKVAASAPKGILRTSDTIQKLQSIPAQPGEISPLIQYFGI LLDQGQLNKLESLKICRVVLQRGRKRLIEKWLKGNQVECSEELGDLVKTADTTLALSVYL RANVPSKVIQCFAEIGQFQKIVLYAKEVGYAPDWIFLLRSVMRISPDQGLQFSQILVRNE EPLASIDQIVNVFMENSLIQQCTSFLLDALKNNHPAEGHLQTRLLEMNLIHAPQVADAIL GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAMVHTHLLSPEWLVSFFGSLSV EDSLACLRALLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYYPERVKNFLKEAKLTDQLPLIIVCDR FDFVHDLVLYLYQNNLQKYIEIYVQKVNPSRIPDVVGGLLDVDCSEDVIKNLIMVVRGQF STDKLVDEVEKRNRLKLLLPWLESWSHEGCEEPAIHNALAKIYIDSNSSPERFLKENSHY DSRVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWAHVL QETNSSRRQLIDQVVQTALSEIQDPEEVSVTVKAFKTADLPNELIELLEKIVLDNSVFSE FRNLQNLLILTAIKVDRTRVMDYIIRLDNYDAPDIASIAITSALYEEAFTIFHKFDMNAS AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLAQAQLQKDLVKEAIDSYIRADDPASYLEV VQTASRNSNWEDLVKFLQMARKKDHESYIETELIFALAKTNRLSELEDCINGPNNAHIQQ VGDRCYEEGMYEAAKLLYSSVSNFAGLASTLVHLGEYQAAVDSSRKANSTRTWMEVCFAC VDGQEFRLAQLCGLHIVIHADELKELICYYQDGGYFEELISVLEAALGLEQAHMGIFTEL AILYSKFKPQKMPEHLELFWSRVNIPKVLKAVEQAHLWAELVFLYDKYEEYDSAVLTMIN HPADAWREGQFKDIIAKVANVELCYKALQFYLEYKPLLINDLLLVLAPRLDHTRTVGFFS EAGQLPLVKPYLRSVQSHNNKSVNEALNHLLTEEEDFQGLRSSIDAYDNFDSIALAQRLE KHPLIEFRRIAAYLYKGNNRWAQSVELCKKDHLYKDAIQYAAESRDAELAEKLLQWFLEE GNWECFGATLFTCYDLLPPDVVLELAWRHNLVDLAMPYFIQVMREFLNKVDRLDASESQR Q NT seq 4866 nt NT seq  +upstreamnt  +downstreamnt atggcgcaaatactccccatccgtttacatgagcacttccagctccaagaccttggaatt aatccagataatattggattcagcacactgactatggaatcagataagtttatatgtgtt caagagaaagtcggtgagcaggcgcacgtagtgattattgatgtgagtgatccaatggca tcaattagatggcccatctctgcagaaagtgccatcatgaatccggcctctaaggtgata gctctgaaagctgggaagacacttcaaatctttagtattgagatgaagaataaaatgaag gctcatactctggcagaagaggtgattttctggaaatgggtctctgtgaacactgtagcc ctggttactgagaccgctgtctaccactggagtatggaagctgactcacagcctatcaag atgtttgatagacatgccagtcttgcaggatgccagatgatccactaccggactgatgag taccagaagtggttggtccttgttggcatctcagcacagcaaaaccgtgtggttggggca atgcagctctattctgtggataggaaggtttcacaacccattgaaggccatgctgctgct tttgcagaattcaaggctgaggggaatgcgaagcctgccacccttttctgctttgctgta cgaaatcccacaggaggcaagttacacataatcgaagttggacagcctgcagcaggaaac cagccttttgtaaagaaagctgtggatgtgtttttccctcctgacgctcagactgatttc ccagtagctatgcagattggagcaaaacacggtgtcattttcttgatcacaaagtatggc tatcttcatatgtatgacctagaatctggtgcatgcatttacatgaaccgtattagtgct gatacaatctttgttactgctccacatgaacctacctctggaattattggtgtcaacaaa aagggacaggtgctttcagtttgtgttgaggaagacaatattgtgaattatgcaaccaac atacttcagaatccagacctcggtctccgtttggccattcgtagtaatctagcaggggca gaggagttatttgtgaaaaaatttgataccctgtttgcacaggggagctatgctgaagca gccaaagtagcagcatctgcaccaaagggaatcttgcgtaccagtgacacaattcagaag ttacagagtatacctgcccagcctggggagatttctccattgatacaatattttggaatc ctgcttgaccagggtcagcttaataaacttgaatccttaaaaatttgtcgtgtagtcctt cagcgaggacgcaagagactcatagaaaagtggctgaaaggaaaccaggtagagtgttca gaagaacttggagatttggtcaagactgctgatactacactggctctgagtgtctacctt cgagcaaatgtgccaagcaaagttatacagtgtttcgcagaaataggccaattccagaaa attgtgctctatgccaaagaggttggctatgccccagactggatctttttgctgaggagt gtgatgaggattagtccagatcagggcctgcagttttctcagattctagtacggaatgag gagccactggctagcattgaccagattgtaaatgttttcatggaaaacagtttaattcag caatgtacttccttcttgttggatgccttgaagaataatcacccagctgaggggcatctt cagacacgcttactggagatgaacctgattcatgccccccaggttgcagatgccatcctt ggaaatcagatgtttactcattatgatcgggcccatatcgcccaactgtgtgaaaaggcc ggtctcctgcagcgagcattggagcactacactgacctctatgacatcaagagggctatg gtccacactcaccttctcagtcccgagtggctcgtcagcttctttggttctttatcagtg gaagattctttggcatgtctgcgtgctctgctgtctgccaacattagacagaaccttcag ttgtgtgttcaggttgcctctaaataccatgagcagctgggtacacagtccttggtggaa ctctttgaatccttcaagagttatgaaggcctcttctacttcctgggctcaattgtgaac ttcagccaagatccagatgtgcacttcaagtacattcaagccgcctgcaagacaggacag ataaaggaggtggagaggatatgccgagagagcaattgctactatcctgaaagggtgaag aacttcctgaaagaggccaaactcactgatcagcttcctcttatcatcgtgtgtgatagg tttgactttgtacatgaccttgtcctgtacttatatcaaaacaacctgcagaagtatatc gagatctacgttcagaaggtgaaccctagtcggatcccagatgtggttggaggactgctt gatgtggattgttcggaagacgtaattaaaaacttgatcatggtagtgagaggacagttc tctacagataagctggtggatgaagtagagaaaagaaacaggctaaaacttctgctccct tggctggagtcctggagtcatgaaggctgcgaagaacctgctattcacaatgcactcgcc aagatctatattgacagcaacagcagccctgagcgcttcttgaaagagaactcccactat gacagtcgtgttgttggccgttattgtgagaagcgggacccacatctggcctgtgtggct tatgagcgagggcagtgtgaccttgagctcatcaaggtttgcaatgagaattctttattc aaaagtgaggctcgctacttggtgcgcaggaaggatccagagctctgggcgcatgtactc caggagaccaattcatccagaagacagctgattgaccaggtggtacaaacagcattatca gaaatacaggatcctgaagaggtttcagtcactgtcaaggccttcaaaacagctgacctc cctaatgaactgattgaactgctggagaagattgttctagataactctgtcttcagtgag ttcaggaatctccagaatctgctaatcctgactgctatcaaggtagaccgcactcgagtc atggactacatcattcgcctggacaattatgatgccccagatattgcaagcattgccatc accagtgcattgtatgaagaggcattcaccatctttcacaagtttgacatgaatgcctca gcaatccaggtcctgattgagcacattggaaacctagatcgagcctatgaatttgcagag agatgcaatgaacctgccgtgtggagtcagctggcccaagcccagctccagaaagactta gtaaaggaagccattgactcttacatcagagctgatgacccagcctcttacctagaggtt gttcagacagccagcaggaatagcaattgggaggatctggttaaattcctacagatggcc aggaaaaaagatcatgaatcctatatagagactgaacttatttttgcgctggctaaaacc aatcgtctctctgagctagaagattgtattaacggacccaacaatgcccacatacaacag gttggagaccgctgttatgaggaaggaatgtatgaagctgctaagctgctatatagcagt gtttctaactttgccggtctggcttctaccctggtccaccttggtgagtatcaggcagca gtggacagcagccgcaaggcaaacagcacacggacatggatggaggtgtgctttgcctgt gtggatggacaggaattccgccttgcacagttgtgtggtctccacatcgtcattcatgca gatgagctgaaagagttaatttgctattaccaggatggaggctactttgaagagctgatc tctgtgttagaagctgccttgggcctggagcaagcccatatgggcatattcacagaactg gctatcctctactccaaattcaagccgcagaagatgccagagcacctggagctcttctgg tcccgtgtcaacatcccgaaggtgttgaaagctgtagagcaggcacacctctgggcagag ctggtgttcctttatgacaagtatgaggagtatgacagtgccgtcctcaccatgatcaat caccctgctgatgcctggagagaaggacagttcaaagacatcattgccaaggtggccaat gtggaactctgttataaggccctgcagttctatttagaatacaaacctctgctcatcaat gacctacttctggtgcttgcaccccggctagaccacactcggactgttggcttcttttca gaggcaggtcagttgcccctggtgaaaccttatctacgttcagtccagagccacaacaac aagagtgtgaatgaagcactaaaccacttgctgacggaagaggaagattttcagggcttg aggtcatctattgatgcctacgacaacttcgatagcatcgccttagctcagcggttggag aagcaccccctgattgagttcaggcgcattgctgcttatctgtacaaaggcaacaatcgg tgggcccagagtgtggagctctgcaagaaggaccatctctacaaggatgccatacagtat gctgcggagtcacgggatgctgaattggccgagaagctgctgcagtggttcctggaggag ggcaactgggagtgcttcggtgccactctcttcacctgctacgacctgcttcccccagat gtggtgctagagctggcctggagacacaacctggtggacctggccatgccctacttcatc caggtgatgagggagttccttaacaaagttgacagactagatgcctcagagagccagcgc cagtga

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