Sorex fumeus (smoky shrew): 130029682
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Entry
130029682 CDS
T10594
Name
(RefSeq) tubulin alpha-3 chain
KO
K07374
tubulin alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04145
Phagosome
sfum04210
Apoptosis
sfum04530
Tight junction
sfum04540
Gap junction
sfum04814
Motor proteins
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130029682
09143 Cell growth and death
04210 Apoptosis
130029682
09144 Cellular community - eukaryotes
04530 Tight junction
130029682
04540 Gap junction
130029682
09142 Cell motility
04814 Motor proteins
130029682
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130029682
09164 Neurodegenerative disease
05010 Alzheimer disease
130029682
05012 Parkinson disease
130029682
05014 Amyotrophic lateral sclerosis
130029682
05016 Huntington disease
130029682
05020 Prion disease
130029682
05022 Pathways of neurodegeneration - multiple diseases
130029682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130029682
03036 Chromosome and associated proteins [BR:
sfum03036
]
130029682
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130029682
04147 Exosome [BR:
sfum04147
]
130029682
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130029682
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130029682
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130029682
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130029682
Exosomal proteins of other body fluids (saliva and urine)
130029682
Exosomal proteins of colorectal cancer cells
130029682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
130029682
NCBI-ProteinID:
XP_055976678
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgacaaaaccatcggtggtggggacgactcattcaacacgttcttcagcgag
acgggggctggcaagcatgtgcccagggcagtgtttgtggacctggagcccactgtggtc
gatgaggtgcgcacggggacctaccggcagctcttccacccggagcagctcatcaccggg
aaggaggacgcggccaacaactacgccagaggccactacaccattggcaaggagatcgtg
gacctggtcctggaccggatccgcaaactggctgacctgtgcacgggcctccagggcttc
ctcatcttccacagcttcggcggcggcaccggctccggcttcgcctccctgctcatggag
cggctgtcggtggactacggcaagaagtccaagctggagtttgccatctacccggccccg
caggtgtccacggccgtggtggagccctacaactccatcctgaccacgcacaccaccctg
gagcactcggactgcgccttcatggtggacaacgaggccatctacgacatctgccggcgc
aacctggacatcgagcggcccacctacaccaacctcaaccgcctcatcggccagatcgtg
tcctccatcacggcctcgctgcgcttcgacggggccctcaacgtggacctgaccgagttc
cagaccaacctggtgccctacccgcgcatccacttccccctggccacctacgcgccggtc
atctcggccgagaaggcctaccacgagcagctgtcggtggccgagatcaccaacgcctgc
ttcgagccggccaaccagatggtcaagtgcgaccctcgccacggcaagtacatggcctgc
tgcatgctgtaccggggggacgtggtgcccaaggatgtcaacgccgccatcgccaccatc
aagaccaagcgcaccatccagtttgtggactggtgccccacgggctttaaggtgggcatc
aactaccagccccccaccgttgttcccgggggggacctggccaaggtgcagcgggccgtg
tgcatgctgagcaacaccaccgccatcgccgaggcctgggcccgcctggaccacaagttc
gacctcatgtatgccaagcgcgcctttgtgcactggtatgtgggcgaaggcatggaggaa
ggggagttctcggaggcccgggaagatttggcagctctggagaaggattatgaagaggtg
ggcgtggattccgtggaagcagaggccgaagaaggggaggagtactga
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integrated database retrieval system