Sorex fumeus (smoky shrew): 130029709
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Entry
130029709 CDS
T10594
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03082
ATP-dependent chromatin remodeling
sfum03250
Viral life cycle - HIV-1
sfum04714
Thermogenesis
sfum05225
Hepatocellular carcinoma
Brite
Protein phosphatases and associated proteins [BR:
sfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130029709 (SMARCB1)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130029709 (SMARCB1)
SWI/SNF complex
130029709 (SMARCB1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130029709 (SMARCB1)
PBAF complex
130029709 (SMARCB1)
SWI/SNF complex
130029709 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130029709
NCBI-ProteinID:
XP_055976706
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgttgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtggggaactaccttcgtatgttccga
ggttctctgtacaagaggtacccctcactctggaggcggctagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcacggt
tacaccaccctggctaccagtgtgaccttgctgaaagcctcagaagtggaagagattctg
gatggcaatgatgagaagtataaggccgtgtccatcagcacggagccccccacctacctc
agggaacagaaagctaagaggaacagccagtgggtgcccaccctgcccaacagctcccac
catctggacgctgtgccgtgttccacaactatcaacaggaaccgcatgggccgggacaag
aagaggaccttccctctgtgctttgatgaccatgacccagctgtgatccatgagaacgca
tcccagcccgaggtgttggtccccatccgcctggatatggagatcgatgggcagaagctt
cgggatgcctttacctggaatatgaatgaaaagctgatgacccctgagatgttctcagaa
atcctctgtgatgacctggacttgaacccactgacctttgtgccagctatcgcttctgcc
atcagacagcagattgagtcctaccccacagacagcatcctggaggatcagtcagaccag
cgtgtcatcatcaagctcaacatccatgtgggcaacatctccctggtggaccagttcgag
tgggacatgtctgagaaggagaactcgccagagaagtttgctctcaagctgtgctccgag
ctggggctcggcggggagtttgtcaccaccattgcctacagcatccggggacagctgagc
tggcatcagaagacctacgccttcagcgagaaccccctgcccactgtggagatcgccatc
cggaacacaggcgacgctgaccagtggtgccctctgctggagaccctgacggatgccgag
atggagaagaagattcgggaccaggacaggaacaccagacgaatgaggcgtctggccaac
actgccccagcctggtaa
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