Sorex fumeus (smoky shrew): 130029750
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Entry
130029750 CDS
T10594
Symbol
PSMD1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130029750 (PSMD1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130029750 (PSMD1)
09164 Neurodegenerative disease
05010 Alzheimer disease
130029750 (PSMD1)
05012 Parkinson disease
130029750 (PSMD1)
05014 Amyotrophic lateral sclerosis
130029750 (PSMD1)
05016 Huntington disease
130029750 (PSMD1)
05017 Spinocerebellar ataxia
130029750 (PSMD1)
05020 Prion disease
130029750 (PSMD1)
05022 Pathways of neurodegeneration - multiple diseases
130029750 (PSMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130029750 (PSMD1)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
130029750 (PSMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
Tim54
Motif
Other DBs
NCBI-GeneID:
130029750
NCBI-ProteinID:
XP_055976760
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKRPIDQRLEGIVNKMFQRCLDDHKYKQAIGISLETRRLDVFEKTVLESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGTVPAPEKDSDS
METEEKPGTVLVAKTPEVSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNT
KDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHE
KEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHG
GSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYA
QETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNN
KAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMAL
GICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKV
INDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLS
HFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSIT
AKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPE
TCRYQPFKPLSIGGIIIMKDTSEDAEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggccgctggaattatctctcttctggatgaagatgaaccacagcttaag
gaatttgcactacacaagttgaatgcagttgtcaatgacttctgggcagaaatttcagag
tctgtagacaaaatagaagttttgtacgaagatgaaggtttccggagtcgacagtttgcg
gccttggtggcatccaaagtattttaccatttgggggcttttgaggagtctctgaattat
gctctcggagctggtgacctcttcaatgtcaatgataactctgaatatgtagagactatt
atagcaaaatgtattgatcactacaccaagcagtgcgtggaaaatgcagatttacctgaa
ggagaaaaaagaccaattgaccagagattggaaggcatcgtgaataagatgttccagcga
tgtctggatgaccacaagtataagcaagccatcggcatctccctggagactcgaaggctg
gatgtctttgagaaaactgtgctggagtcgaatgatgttccaggaatgcttgcttatagc
ctcaagctctgtatgtctttaatgcagaataagcagtttcgaaataaagtgctaagagtt
ttagtcaaaatctacatgaacttggaaaaaccggatttcatcaatgtttgtcagtgctta
atttttttagatgatcctcaggctgtgagtgatatcttagagaagttggtaaaggaagac
aacctcctgatggcttatcagatttgttttgatttgtacgaaagtgctagccagcagttc
ttgtcatctgtaatccagaatcttcgaacagttggtactcctatcgcgtctgtgcctgga
tccaccaatacgggtactgttccaggcaccgttccagcaccagagaaagacagtgattca
atggaaacagaagaaaagccaggcaccgtgcttgtagcaaagactccagaagtgagtcca
gaacccaaggaccagactttgaaaatgatcaaaattttaagtggtgaaatggctattgaa
ttacatttgcaatttttaatacgaaacaataacacagatctcatgattctaaagaacaca
aaggatgcagtacggaattctgtatgtcacacagcaactgttatagcaaattcttttatg
cactgtgggactaccagtgaccagtttcttagggataacttggaatggttggccagagcc
actaactgggcaaaattcacagctacagccagtttgggtgtgattcacaagggccacgag
aaggaagcgttacagctaatggcaacataccttcccaaggacacctctccagggtcggcc
tatcaggagggtggaggcctctatgctctcggtctcattcatgccaatcatggtggtgat
atcatcgactacctgcttaaccagctcaagaacgccagcaatgatattgttcgacatggt
ggcagtctgggtctcggtttggctgccatgggaaccgcacgtcaggatgtctatgatttg
cttaaaaccaacctttatcaggatgatgctgtaacaggagaagcagctggccttgccctg
ggtttagttatgttgggctctaaaaatgcccaggctatagaggacatggtcggctatgcc
caggaaactcagcatgagaagattctgcggggccttgcagttggcattgcgctggtgatg
tacgggcgcatggaggaggccgatgctctcattgagtcgctctgtcgggataaggaccca
attcttcgaaggtctgggatgtatactgtagccatggcatattgtggctcaggtaacaac
aaggcgattcgccgcctgctgcatgttgctgtgagtgacgttaatgacgatgtcagaagg
gcagcggtagagtcacttgggttcattctgttcaggacccccgagcagtgccccagcgtg
gtgtccctgctgtcggagagttacaatcctcacgtgcgctacggagctgccatggccctg
ggcatctgctgtgctggaaccggaaacaaggaagcaattaatttgctggaaccaatgaca
aatgaccctgtgaattacgtgcggcaaggggccctcatcgcgtcagctctcatcatgatc
cagcagacggaaataacctgtccaaaggtgaatcagttcagacagctgtattccaaagtc
atcaacgataaacatgatgatgtcatggcgaagtttggcgctattctggcccagggcata
ctggacgcaggtggccataacgtcacaatctccttgcagtccaggacgggacacacccat
atgccgtctgtggttggcgtccttgtcttcacccagttctggttctggtttcctctttca
cacttcctgtcgttggcttatacccctacttgtgtcattggccttaataaggatttaaag
atgccaaaagttcagtataaatcaaactgtaaaccatccacatttgcatatcctgcccct
ctggaagtaccaaaagaaaaggaaaaggaaaaggtttccactgctgtgttgtctataact
gctaaggctaaaaagaaggaaaaggaaaaagagaaaaaggaggaggaaaaaatggaagtg
gatgaagcagagaaaaaggaagaaaaagagaagaaaaaagaacctgaaccaaacttccag
ttattggataatcccgcccgagtgatgcctgcccagctgaaggtcctgaccatgccggag
acctgtcgctaccagcccttcaagccactttccatcgggggcatcatcatcatgaaggac
acaagcgaagacgctgaagagctggtcgaacccgtggcagcccatggcccgaaaattgag
gaggaagaacaggagccggagcccccagaaccgtttgagtacatcgatgattaa
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