Sorex fumeus (smoky shrew): 130029810
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Entry
130029810 CDS
T10594
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfum03037
]
130029810 (CFAP43)
Cilium and associated proteins [BR:
sfum03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
130029810 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
130029810
NCBI-ProteinID:
XP_055976813
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MAHGKERDEAAPSSPSTTLSVRWVLGFPKQKVQFMNDKTICYPCGNFIVFINIETKKRSI
LQCMNGIVGVMATNIPHQVVAFSDRKLKPLIYIYNFPELTRKMKLKGNVLLDYTILSFSY
CGTYLASYSSLPEFELAIWDWKMNVILCKKTQPGTDVNQMTFNPMNWRQLCLSSTSAVTL
WTIERCNQVHHLKSKTIKLPLEDGTFDNETDNVFPQSLPKDLIYGPVLPLSAIAGLVDKE
AETFKPKDDLFSLIHPTVHCWTPSSDLYIGSEEGLILVFNGESSQVTILNMIEDSFPNLD
KTLMAPMTMVYQKGGMLASGLDGLIYSCTIKDFNCTVKDFFEVEESLQYMTFSPNYKMLL
LQTSKGCVYICTLTEEPVLDKILESCEDKFHSVDFIIPGHEFLTLSPMGEVSVWNIEDAS
NVSRIFLNTPTSVLACSPSSLSAVVGTVTGFVQFLDLRNTSSLRIIHKIFLSRAPVDHLL
YDQQGMYLFAGTSEGYVFVIDAHPSSLFKILGFVEVATNILQISTVSLLETDIVEVMVMS
VLPNKRTRLETFVLPRMLPQVTMGFVDERGRMRNELIHTFLYEIEHTLSSAVLDYKSHRV
YGFCSDVPYICSYELPENEHVGILILKPSQKLPSRHYGSGTLSLSPHGLWLLSTAKCGVL
SIRDIQNLETFARFRSHSHQSRGIQSVKISVDGHTILVNGKNDGTLVNIKWRRLGGSLAS
EALDYGRNLLNSLKMKMEKENLCLDMSPGENVNPLEEVSFNISLCTDSSQEEEPRQFENM
EEIPWLEKKTQKAIQKEVRLFSSTRKEIKKGIKALTKTIQEMMEENDTLESISKLEQQEF
ALDLEELENLHHQSEEEVSKIRNNVEMNNLTKKYLAELIKEECWNSMAVKGRSLKCFHIP
CVVENFPMKARTQEELAELNRVINQKKVENECLKVREETIEIQSTVAMVKKFHEEDEEEE
EEKVKIRDINLPNYLLGSLCTDFGIDISLLSSQMELHAKEEKINQIILLKDIIYQVKTAF
NKEFDAAYKQKEFEIARVKEKNIRIQEIILDLELDESVWTPRFDDTEKPERTLVVDVSEI
TAHKHISPWHRAKADTSTVQEAENLLMNSVVESRRRALMDMMGGVLEMKKEDILKMVIPQ
PDFMLKPEVLWSEEERKQYKDYEKKVKELNEERDKYKKSLDAELRKLQNAIQESTQHFDE
LLKRLFDRRVKAEMVVNQEELKINNLLFSLLLDEELCSREEYLNNYLSRKQEEKSQTSEA
ILKAKENLEMYKEQYDNLVAEDKVLERSFKKEFSEISGHHVEMLLKLFKRRPRVHKLKPH
LEVITNNPFGDRPGSGKLAQESFALLMKAMDDLDNFNNMPEGLDFEVWSHFCMVRRTKVE
NEQKVKQKAAGLVEMTAFLRKRTEEDEKVQQDIEKVYHELILLQEEKVKYQLNLTIQILL
KQGQIELENFQFLMEYSDAILINKNIIEELNSVIRTQGQKKVASMMESKDFHKGIFQIEW
EHKKMEMEMEDLNQKAWDIQMLFFSRDRQKFLNEPNYESLINFQIGIMEQTINVLEKTHK
KNVENCKKILMKLGKFSNQKDIANYQLSCNLREELVAVSERKDICNAMGATLTCEKIAKE
RYENLILQQKLTHISREQAAQISVLEAEVERLRMKTFPALTQM
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggctcacggcaaggagcgcgacgaggccgccccctcctcccccagcactacgctgtct
gtgagatgggtactaggattccctaaacagaaagtccagtttatgaatgacaaaaccatt
tgctatccttgtggaaacttcatagtgtttattaatattgagaccaagaaaaggagtatt
cttcagtgtatgaatggaattgtgggggtcatggcaacgaacattcctcatcaagttgtg
gctttttctgaccggaaactcaaacctctcatctacatatacaactttccagaattgacc
agaaagatgaaattgaaaggcaacgttcttctggactacacaatactttcattcagttac
tgtggcacctatctggcaagttattcctctctcccagaatttgaactggccatttgggac
tggaaaatgaatgtcattctgtgcaagaagacacagcctggcacagatgtgaaccagatg
acattcaaccccatgaactggcgccagctatgcttgtcaagcaccagtgcagtgactctc
tggaccattgaacgctgtaaccaggttcatcatttgaaatcgaaaacaataaaactgcct
ttggaagatgggacctttgacaatgagacagacaatgttttcccccagtcgctgcccaag
gacctgatctatggtccggtgctcccactgtcagccattgctgggctcgtggacaaagag
gcagaaacattcaagcctaaagacgatttgttttctttaattcatcctactgtgcattgc
tggactccatcaagcgacctatatattggctctgaagagggtcttattttagtgtttaat
ggagaaagctcacaagtgactatcctcaatatgatagaagattcttttccaaatctagat
aaaactctgatggctccaatgactatggtatatcagaagggaggaatgcttgcttctgga
cttgatggcttaatatattcttgtactattaaagattttaattgtactgtcaaagatttt
tttgaggttgaagaatctttgcaatatatgacattttctcctaattacaaaatgctgttg
ttacagacaagtaagggatgtgtatatatttgcactttgactgaagagccagtccttgat
aaaatcctagaatcttgtgaagataaatttcactcagtcgactttatcatacctggacat
gaattcttgaccctctcacctatgggggaagtttccgtttggaatatagaagatgcttca
aatgtcagcaggatttttctaaacaccccaacaagtgtcctggcgtgctcaccctcatct
ctctcagcagttgtagggacagtaactggctttgtccagttccttgacctccgtaatacc
agctcccttcgtatcattcacaagatatttctctccagagcgcctgtggaccacctcctg
tatgatcaacaaggaatgtacctatttgctggaacatcagaaggctatgtctttgttatt
gatgctcatccttccagcctctttaagattcttggatttgtagaggtggccacaaacatt
ttgcaaatatccacagtgtctcttctggaaacagacatagtggaagtgatggtgatgtcc
gtgcttccaaacaaaagaaccagattggaaacatttgttttgcccagaatgttaccacaa
gttactatgggctttgttgatgaaagagggaggatgagaaatgaattaattcatacattc
ctgtatgagatcgagcacaccctgtcctcggcagtgctggactacaaaagtcaccgagtc
tatggcttctgctcagacgtgccgtacatctgcagctatgagctcccagaaaatgagcat
gttggtattctcattctgaagccatcccaaaaactgccaagccggcattatggatctgga
acactctctctgtctccacatggactgtggctcctctcaacagctaaatgtggggttctg
tctatccgagatattcagaatttggaaacctttgctcggtttcggagtcattctcaccag
agccgtgggatccagtcagtgaaaatttccgtagacggacacaccattctggtgaatgga
aagaatgatggcactctagttaacataaaatggaggcgcctaggaggaagcttagcgagt
gaagctctggactatggcagaaatcttttaaattctctgaagatgaaaatggaaaaagag
aatctttgtttagatatgtcaccaggagagaatgtcaatccccttgaagaagtgagtttc
aatatttctctttgcacggactcatcgcaagaggaggaaccacgccagtttgaaaacatg
gaggaaattccctggttagaaaaaaaaactcagaaggccatccagaaggaggtgagactc
ttttctagtacaagaaaagagattaaaaaaggaatcaaagctttgactaaaaccattcag
gaaatgatggaagagaatgatacactagaaagtatttcaaaattagagcaacaggagttt
gccttggatcttgaggaactagagaatcttcaccatcaaagtgaggaagaagtgtcaaag
atacgaaacaatgtagaaatgaataacctcaccaagaaatatttggctgaacttatcaaa
gaggagtgctggaattccatggctgtgaaaggccgctctctcaagtgctttcatatcccc
tgtgtggttgagaattttccaatgaaagcacgcacacaggaagaactggcagaattaaac
agagttataaatcaaaagaaggttgaaaacgaatgtcttaaggtccgggaggaaactata
gaaatccagagtacagttgccatggtaaaaaagtttcatgaggaggatgaagaagaggaa
gaagaaaaagttaaaataagagatattaacttgcccaattatctacttggcagtctgtgt
actgattttgggatagacatctctttgttgtcaagccaaatggaacttcatgccaaagag
gaaaaaatcaatcaaataatcttactgaaagatattatttaccaggtaaaaactgctttc
aacaaagagtttgatgctgcgtataaacaaaaggagtttgaaattgcacgtgtgaaggaa
aaaaatatacggattcaagaaatcattcttgatctggaactggacgaatcagtctggaca
cccaggtttgatgacactgagaagccagagagaacacttgttgtggatgttagtgagatc
acagcgcacaagcacatatccccatggcaccgagccaaagcagatacgtctacagtccag
gaagcggagaacctgcttatgaattcggtcgtggagtccagacgccgagcgctcatggac
atgatgggaggtgtcctggagatgaagaaggaggacattctgaaaatggtgattcctcaa
cctgatttcatgttgaaacctgaggtcttatggtctgaagaagaaaggaagcaatacaaa
gactatgagaaaaaagtcaaggagttaaatgaagaaagagataaatacaaaaagtctcta
gatgcagagctgagaaaacttcagaacgctattcaagaaagcacacagcattttgatgaa
ctcttgaaaagactctttgacaggagagtgaaggcagaaatggttgtgaaccaggaggaa
ttgaaaataaataacctgcttttttccttactgttggatgaagaactatgctccagagaa
gaatacctaaataactatctttcaaggaaacaggaggagaaaagccagacttcagaggcc
atcctgaaagctaaagaaaacctcgaaatgtacaaggagcaatatgacaacttagtggca
gaggacaaagttctggaacgtagctttaaaaaggaattttctgaaatttctggtcatcat
gtggaaatgctcctcaaactttttaaacgaagaccaagggttcacaaattgaaaccacat
ctagaagtaattactaataacccttttggagatcgaccaggatctgggaaattggctcag
gaaagctttgccctgttaatgaaagccatggatgatttggacaattttaataatatgcca
gaaggcttggacttcgaagtatggtcgcatttttgcatggttcgacgaacaaaagtggaa
aatgaacagaaagtaaagcagaaagcagctggcttagtggaaatgacagctttcctccgg
aagagaactgaagaagatgagaaagtgcaacaggacattgagaaagtgtaccatgaactc
atcctattacaagaagaaaaagtgaaataccagttgaatttgacgatacaaattctcctt
aagcaaggacaaatagaactggagaatttccagtttcttatggagtattctgatgcaatt
ctcatcaacaagaacataattgaagagttgaattcagtgattcggacacaaggacagaag
aaagttgctagcatgatggaaagtaaagactttcacaaaggaatatttcagattgagtgg
gaacataagaaaatggagatggaaatggaagatctaaatcagaaggcttgggatattcag
atgctatttttttcaagagaccgtcaaaagttcctaaatgaaccaaactatgagtcgctg
attaactttcagattggaataatggagcagaccattaatgttttagaaaagacccacaaa
aagaacgtggaaaattgcaaaaaaattcttatgaaactgggaaagtttagcaatcaaaag
gacatagcaaattatcagctaagctgcaatttacgagaagagttagtggctgtttcagag
agaaaagacatctgtaatgcaatgggggctacactgacttgtgaaaagatcgctaaagaa
cgatatgaaaacctgattctacaacaaaagttaacacatatttcaagagaacaggctgca
caaatttctgtactggaggctgaagttgaaagattaagaatgaaaacatttcctgctctt
acgcaaatgtaa
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